China is not only the first reported place of the COVID-19 pandemic but also is the biggest microplastic emitter in the world. Nevertheless, the impact of the COVID-19 pandemic on microplastic pollution in the watersheds of China remains poorly understood. To address this, the present study conducted a data mining and multivariate statistical analysis based on 8898 microplastic samples from 23 Chinese watershed systems before and during the COVID-19 pandemic. The results showed that the COVID-19 pandemic extensively affected the abundance, colors, shapes, polymer types, and particle sizes of microplastic in Chinese watershed systems. Before and during the COVID-19 pandemic, 77.27 % of the Chinese watershed systems observed increased microplastic abundance. Moreover, the COVID-19 pandemic itself, natural conditions (such as altitude and weather), and anthropogenic factors (such as civil aviation throughput) are highly intertwined, jointly impacting the microplastic in the watersheds of China. From the perspective of ecological risks, the COVID-19 pandemic was more likely to aggravate the microplastic pollution in the middle and down reaches of the Yangtze River Watersheds. Overall, whether before or during the COVID-19 pandemic, the main watershed systems of China still stayed at a high pollution level, which rang the alarm bell that watershed systems of China had been at serious ecological risk accused of microplastic contamination.