One hundred and five fowl adenovirus (FAdV) strains were isolated in China from 2015 to 2016 from poultry with inclusion body hepatitis (IBH) and hydropericardium syndrome (HPS). Polymerase chain reactions determined that 68 were FAdV species C, five were FAdV species D, two were FAdV species E, and 30 contained two or more different FAdV strains. A phylogenetic analysis showed that the isolated FAdV strains clustered into three major groups: FAdV-C, FAdV-D and FAdV-E. Based on a hexon gene sequencing analysis, these viruses were genetically related to FAdV-4, FAdV-7, FAdV-8b and FAdV-11, of which FAdV-4 was dominant (93% of the strains). An epidemiological analysis showed that FAdVs had been circulating in broilers, domestic chickens, and layers, and co-infections with other immunosuppressive pathogens, such as chicken infectious anaemia virus, Marek's disease virus and reticuloendotheliosis virus, were identified. To control FAdVs, strict biosecurity protection measures are necessary, and a continued surveillance of FAdVs is needed to increase our understanding of the epidemiology of the viruses that are associated with IBH and HPS.
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