The data on the composition, structure and dynamics of phytoplankton in morphologically different tributaries of the Cheboksary reservoir (the Vetluga, Kerzhenets and Vishnya rivers) are given. The floristic composition of algae includes 856 species and intraspecific taxa, algoflora is characterized as diatom-green-euglena algae. There is an increase in quantitative indicators of algocenosises from oligotrophic to oligotrophic-mesotrophic level in the middle course of the rivers, with mesotrophic-eutrophic level in the estuaries. The period of abnormally hot summer in 2010 led to increasing of vegetation of blue-green and dinophyte algae in the middle course and estuaries of the rivers. Since the early 2000s, penetration and naturalization of invasive algae species has been noted.
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