Charge-dipole Interactions Research Articles

Chiral Cyclobutane β-Amino Acid-Based Amphiphiles: Influence of Cis/Trans Stereochemistry on Solution Self-Aggregation and Recognition.

Novel diastereomeric anionic amphiphiles based on the rigid cyclobutane β-amino acid scaffold have been synthesized and deeply investigated with the aim of generating new functional supramolecular architectures on the basis of the rational design of original amphiphilic molecules and the control of their self-assembly. The main interest has been focused on the effect that cis/trans stereochemistry exerts on their molecular organization and recognition. In diluted solutions, the relative stereochemistry mainly influences the headgroup solvation and anionic-charge stabilization, i.e., better stabilized in the cis diastereoisomer due to intramolecular hydrogen-bonding and/or charge-dipole interactions. This provokes differences in their physicochemical behavior (pKa, cmc, conductivity) as well as in the structural parameters of the spherical micelles formed. Although both diastereoisomers form fibers that evolve with time from the spherical micelles, they display markedly different morphology and kinetics of formation. In the lyotropic liquid crystal domain, the greatest differences are observed at the highest concentrations and can be ascribed to different hydrogen-bonding and molecular packing imposed by the stereochemical constraints. Remarkably, the spherical micelles of the two anionic surfactants show dramatically diverse enantioselection ability for bilirubin enantiomers. In addition, both the surfactants form heteroaggregates with bilirubin at submicellar concentrations but with a different expression of supramolecular chirality. This points out that the unlike relative configuration of the two surfactants influences their chiral recognition ability as well as the fashion in which chirality is expressed at the supramolecular level by controlling the molecular organization in both micellar aggregates and surfactant/bilirubin heteroaggregates. All these differential features can be appropriate and useful for the design and development of new soft materials with predictable and tunable properties and reveal the cyclobutane motif as a valuable scaffold for the preparation of new amphiphiles.

Role of Headgroup Dipole Interactions in Phosphatidylcholine and Phosphatidylserine Bilayers

The presence of a dielectric gradient in lipid bilayers is critical for membrane peptide folding in vivo. In addition, the hydrogen bonding ability of lipid head groups is known to affect bilayer properties. To reveal the role of headgroup dielectric properties in phospholipid bilayers, we have developed a polarizable Coarse-Grained (pCG) model, where the dipole moment of polar groups, such as serine and ester groups, can be adjusted through the addition of two extra “dummy” particles inside a CG bead. These dummy particles can mimic the hydrogen bonding network that can exist among head groups. The addition of polarization effects into CG beads has been proven effective in prior work regarding de novo peptide secondary structure folding with no external bias (Ganesan, 2014).In this work, we have explored the role of dipole interactions in monocomponent lipid bilayers using POPC (Palmitoyl Oleoyl Phosphatidyl-Choline) and POPS (Palmitoyl Oleoyl Phosphatidyl-Serine) lipids. An excellent agreement is observed on several structural and dynamical bilayer properties when compared to all-atom simulation data.We will present results on the role of dipole-dipole and dipole-charge interactions in shaping the clustering of PS lipids. Since dipole interactions are influenced by charge screening, the model is sensitive to changes in salt concentration. Our results suggest that headgroup dipole interactions may participate in PS/PC lipid phase separation as observed in experiments.Reference“The role of backbone dipole interactions in the formation of secondary and super-secondary structures of proteins”, Ganesan S. J., Matysiak S., Journal of Chemical Theory and Computation (2014).

The Role of Backbone Dipole Interactions in the Formation of Secondary and Supersecondary Structures

We present a generic solvated coarse-grained protein model that can be used to characterize the driving forces behind protein folding. Each amino acid is coarse-grained with two beads, a backbone and side-chain. While the backbone beads are modeled as polar entities, side-chains are either hydrophobic, polar or charged, thus allowing the exploration of how sequence patterning determines a protein fold. The change in orientation of the atoms of the coarse-grained unit is captured by the addition of two oppositely charged dummy particles inside backbone coarse-grained bead. These two dummy charges represent a dipole which can fluctuate thus introducing structural polarization into the coarse-grained model. Realistic alpha/beta content is achieved de novo without any biases in the force-field toward a particular secondary structure The dipoles created by the dummy particles interact with each other and drive the protein models to fold into unique structures depending on the amino acid patterning and presence of capping residues. We will present the role of dipole-dipole and dipole-charge interactions in shaping secondary and supersecondary structure of proteins. Since dipole interactions are influenced by the dielectric environment, the model is sensitive to the nature of the environment (low or high dielectric). Results on how changes in dielectric can tune the emergence of different folds will be presented.

Structural characterization of functionalized gold nanoparticles for drug delivery in cancer therapy: a NMR based approach.

In the present paper, we report results from a study of the structure and physicochemical properties of gold nanoparticles modified with poly(ethylene glycol) (PEG) designed for the drug delivery of the proteasome inhibitor Bortezomib (BTZ) in cancer therapy. A number of advanced analytical techniques were used to define important physicochemical characteristics such as composition, structure, surface properties, particle size and morphology. A new approach based on detailed NMR studies was employed to define specific intermolecular interactions and mechanisms of drug immobilization and location into surface modified gold nanoparticles (AuNPs). Particularly important information was gained from analysis of NMR spectroscopic parameters such as the spectral line shape, translation diffusion, the nuclear Overhauser effect (NOE) and spin-lattice relaxation (T1). The results confirmed the coexistence of two different types of BTZ inclusion into polyethylene glycol coated gold nanoparticles: (i) association with the polymer chains by weak H-bonds and/or dipole-charge interactions and (ii) adsorption on the surface of the gold nanoparticles. The results allowed for determination of the overall structure of Bortezomib loaded PEG coated AuNPs, which is related to the therapeutic drug efficacy and activity in the treatment of cancer.

Modifiers of membrane dipole potentials as tools for investigating ion channel formation and functioning.

Electrostatic fields generated on and within biological membranes play a fundamental role in key processes in cell functions. The role of the membrane dipole potential is of particular interest because of its powerful impact on membrane permeability and lipid-protein interactions, including protein insertion, oligomerization, and function. The membrane dipole potential is defined by the orientation of electric dipoles of lipid headgroups, fatty acid carbonyl groups, and membrane-adsorbed water. As a result, the membrane interior is several hundred millivolts more positive than the external aqueous phase. This potential decrease depends on the lipid, and especially sterol, composition of the membrane. The adsorption of certain electroneutral molecules known as dipole modifiers may also lead to significant changes in the magnitude of the potential decrease. These agents are widely used to study the effects of the dipole potential on membrane transport. This review presents a critical analysis of a variety of data from studies dedicated to ion channel formation and functioning in membranes with different dipole potentials. The types of ion channels found in cellular membranes and pores formed by antimicrobial agents and toxins in artificial lipid membranes are summarized. The mechanisms underlying the influence of the membrane dipole potential on ion channel activity, including dipole-dipole and charge-dipole interactions in the pores and in membranes, are discussed. A hypothesis, in which lipid rafts in both model and cellular membranes also modulate ion channel activity by virtue of an increased or decreased dipole potential, is also considered.

PEGylation site-dependent structural heterogeneity study of monoPEGylated human parathyroid hormone fragment hPTH(1-34).

The structures of C- and N-terminally monoPEGylated human parathyroid hormone fragment hPTH(1-34) as well as their unmodified counterparts, poly(ethylene glycol) (PEG) and hPTH(1-34), have been studied by small-angle neutron scattering (SANS). The scattering results show that free hPTH(1-34) in 100 mM phosphate buffer (pH 7.4) aggregates into clusters. After conjugation with PEG, the PEG-peptide conjugates self-assemble into a supramolecular core-shell structure with a cylindrical shape. The PEG chains form a shell around the hPTH(1-34) core to shield hPTH(1-34) from the solvent. The detailed structural information on the self-assembled structures is extracted from SANS using a model of the cylindrical core with a shell of Gaussian chains attached to the core surface. On the basis of the data, because of the charge-dipole interactions between the conjugated PEG chain and the peptide, the conjugated PEG chain forms a more collapsed conformation compared to free PEG. Moreover, the size of the self-assembled structures formed by the C-terminally monoPEGylated hPTH(1-34) is about 3 times larger than that of the N-terminally monoPEGylated hPTH(1-34). The different aggregation numbers of the self-assembled structures, triggered by different PEGylation sites, are reported. These size discrepancies because of different PEGylation sites could potentially affect the pharmacokinetics of the hPTH(1-34) drug.

Direct observation of metal nanoparticles as heterogeneous nuclei for the condensation of supersaturated organic vapors: nucleation of size-selected aluminum nanoparticles in acetonitrile and n-hexane vapors.

This work reports the direct observation and separation of size-selected aluminum nanoparticles acting as heterogeneous nuclei for the condensation of supersaturated vapors of both polar and nonpolar molecules. In the experiment, we study the condensation of supersaturated acetonitrile and n-hexane vapors on charged and neutral Al nanoparticles by activation of the metal nanoparticles to act as heterogeneous nuclei for the condensation of the organic vapor. Aluminum seed nanoparticles with diameters of 1 and 2 nm are capable of acting as heterogeneous nuclei for the condensation of supersaturated acetonitrile and hexane vapors. The comparison between the Kelvin and Fletcher diameters indicates that for the heterogeneous nucleation of both acetonitrile and hexane vapors, particles are activated at significantly smaller sizes than predicted by the Kelvin equation. The activation of the Al nanoparticles occurs at nearly 40% and 65% of the onset of homogeneous nucleation of acetonitrile and hexane supersaturated vapors, respectively. The lower activation of the charged Al nanoparticles in acetonitrile vapor is due to the charge-dipole interaction which results in rapid condensation of the highly polar acetonitrile molecules on the charged Al nanoparticles. The charge-dipole interaction decreases with increasing the size of the Al nanoparticles and therefore at low supersaturations, most of the heterogeneous nucleation events are occurring on neutral nanoparticles. No sign effect has been observed for the condensation of the organic vapors on the positively and negatively charged Al nanoparticles. The present approach of generating metal nanoparticles by pulsed laser vaporization within a supersaturated organic vapor allows for efficient separation between nucleation and growth of the metal nanoparticles and, consequently controls the average particle size, particle density, and particle size distribution within the liquid droplets of the condensing vapor. Strong correlation is found between the seed nanoparticle's size and the degree of the supersaturation of the condensing vapor. This result and the agreement among the calculated Kelvin diameters and the size of the nucleating Al nanoparticles determined by transmission electron microscopy provide strong proof for the development of a new approach for the separation and characterization of heterogeneous nuclei formed in organic vapors. These processes can take place in the atmosphere by a combination of several organic species including polar compounds which could be very efficient in activating charged nanoparticles and cluster ions of atmospheric relevance.

Toward a more complete understanding of noncovalent interactions involving aromatic rings.

Noncovalent interactions involving aromatic rings, which include π-stacking interactions, anion-π interactions, and XH-π interactions, among others, are ubiquitous in chemical and biochemical systems. Despite dramatic advances in our understanding of these interactions over the past decade, many aspects of these noncovalent interactions have only recently been uncovered, with many questions remaining. We summarize our computational studies aimed at understanding the impact of substituents and heteroatoms on these noncovalent interactions. In particular, we discuss our local, direct interaction model of substituent effects in π-stacking interactions. In this model, substituent effects are dominated by electrostatic interactions of the local dipoles associated with the substituents and the electric field of the other ring. The implications of the local nature of substituent effects on π-stacking interactions in larger systems are discussed, with examples given for complexes with carbon nanotubes and a small graphene model, as well as model stacked discotic systems. We also discuss related issues involving the interpretation of electrostatic potential (ESP) maps. Although ESP maps are widely used in discussions of noncovalent interactions, they are often misinterpreted. Next, we provide an alternative explanation for the origin of anion-π interactions involving substituted benzenes and N-heterocycles, and show that these interactions are well-described by simple models based solely on charge-dipole interactions. Finally, we summarize our recent work on the physical nature of substituent effects in XH-π interactions. Together, these results paint a more complete picture of noncovalent interactions involving aromatic rings and provide a firm conceptual foundation for the rational exploitation of these interactions in a myriad of chemical contexts.

Ionization-induced tautomerization in cytosine and effect of solvation.

The recent observation of excitation-induced tautomerization in gas-phase cytosine motivated us to investigate the possibility of facile tautomerization in ionized cytosine and the effect of solvation on the tautomerization barriers. The tautomerization mechanisms were characterized at the density functional theory (DFT)/ωB97X-D and coupled-cluster singles and doubles (CCSD) levels of theory. Vertical and adiabatic ionization energies (VIEs and AIEs, respectively) of the tautomers of cytosine and the microsolvated species were calculated with the equation-of-motion ionization-potential coupled-cluster (EOM-IP-CCSD) method. We observed that, in microsolvated cytosine, the solvatochromic shifts of the VIEs can be both blue- and red-shifted depending on the tautomers. This is explained by the analysis of the charge-dipole interactions between the cytosine and water molecules. We noticed that, upon ionization, gas-phase tautomerization barriers are reduced by 0-4 kcal/mol, whereas microsolvated (with one water) tautomerization barriers are reduced by 4-5 kcal/mol. We also investigated the tautomerization process in solvation using a continuum model with one active water molecule in the quantum mechanical region. We noticed that, even though bulk solvation has a significant effect on ionization energies, its effect on the ionization-induced tautomerization barrier is minimal.

Role of Backbone Dipole Interactions in the Formation of Secondary and Supersecondary Structures of Proteins.

We present a generic solvated coarse-grained protein model that can be used to characterize the driving forces behind protein folding. Each amino acid is coarse-grained with two beads, a backbone, and a side chain. Although the backbone beads are modeled as polar entities, side chains are hydrophobic, polar, or charged, thus allowing the exploration of how sequence patterning determines a protein fold. The change in orientation of the atoms of the coarse-grained unit is captured by the addition of two oppositely charged dummy particles inside the backbone coarse-grained bead. These two dummy charges represent a dipole that can fluctuate, thus introducing structural polarization into the coarse-grained model. Realistic α/β content is achieved de novo without any biases in the force field toward a particular secondary structure. The dipoles created by the dummy particles interact with each other and drive the protein models to fold into unique structures depending on the amino acid patterning and presence of capping residues. We have also characterized the role of dipole–dipole and dipole–charge interactions in shaping the secondary and supersecondary structure of proteins. Formation of helix bundles and β-strands are also discussed.

Critical concentration of ion‐pairs formation in nonpolar media

It is known that nonpolar liquids can be ionized by adding surfactants, either ionic or nonionic. Surfactant molecules serve as solvating agents, building inverse micelles around ions, and preventing their association back into neutral molecules. According to the Bjerrum-Onsager-Fuoss theory, these inverse micelle ions should form "ion pairs." This, in turn, leads to nonlinear dependence of the conductivity on the concentration. Surprisingly, ionic surfactants exhibit linear conductivity dependence, which implies that these inverse micelle ions do not form ion pairs. Theory predicts the existence of two ionic strength ranges, which are separated by a certain critical ion concentration. Ionic strength above the critical one is proportional to the square root of the ion concentration, whereas it becomes linear below the critical concentration. Critical ion concentration lies within the range of 10(-11) -10(-7) mol/L when ion size ranges from 1 to 3 nm. Critical ion concentration is related, but not equal, to a certain surfactant concentration (critical concentration of ion-pairs formation (CIPC)) because only a fraction of the surfactant molecules is incorporated into the micelles ions. The linear conductivity dependence for ionic surfactants indicates that the corresponding CIPC is above the range of studied concentrations, perhaps, due to rather large ion size. The same linearity is a sign that charged inverse micelles structure and fraction are concentration independent due to strong charge-dipole interaction in the charge micelle core. This also proves that CIPC is independent of critical concentration of micelle formation. Nonionic surfactants, on the other hand, exhibit nonlinear conductivity dependence apparently due to smaller ion sizes.

Dielectric spectra broadening as a signature for dipole-matrix interaction. IV. Water in amino acids solutions

In this paper, the fourth one of our series on the dielectric spectrum symmetrical broadening of water, we consider amino acid (AA) aqueous solutions. The developed 3D-trajectory is applied here to the variety of zwitterion amino acids representing both the hydrophobic and hydrophilic nature of their residues. The dipole moment of amino acids due to their zwitterion determines their interaction with the solvent and reflects mostly the dipole-matrix interactions described in our Paper I [E. Levy et al., J. Chem. Phys. 136, 114502 (2012)]. It is also shown that in the case of charged AAs at high concentrations, the shape of the 3D trajectory transforms to the pattern typical of the dipole-charge interactions that were described in our Paper III [A. Puzenko et al., J. Chem. Phys. 137, 194502 (2012)].

Influenza Membrane Fusion as Viewed from the Structure and Dynamics of the Full-Length Hemagglutinin Fusion Domain

The N-terminus of the influenza hemagglutinin HA2 subunit, known as the fusion domain or fusion peptide, is critical to membrane fusion and influenza cellular entry. It is one of the most conserved sequences in the influenza genome such that modest mutation can arrest membrane fusion. Despite this domain's critical role to influenza membrane fusion and entry, there is no clear consensus in the literature on this domain's function. Research over the last 25 years focused on a fusiogenic 20-residue peptide of this domain, which adopts a boomerang structure with an N-terminal α-helix and a partially disordered C-terminus. We recently demonstrated that a peptide extending an additional three completely conserved, hydrophobic residues was needed to accurately model the fusion domain's structure. The full-length fusion domain is more fusiogenic and adopts a distinct and unique helical-hairpin membrane protein fold. The helical-hairpin is stabilized by four aliphatic CαHα-O hydrogen bonds as well as a charge-dipole interaction at the N-terminus. With a new NMR tool for measuring the dynamics of proteins in membranes, we uncovered the surprisingly dynamic interaction of the fusion domain within membranes. Finally, we reported a multiconformational NMR refinement strategy to reveal the pH-triggered activated structures in the fusion domain, which could play a role in forming a pore in the later stages of fusion.

Syn-/anti-Anthradithiophene Derivative Isomer Effects on Semiconducting Properties

Isomerically pure syn-/anti-anthradithiophene derivatives have been developed in the past few years. Although anti-isomers showed higher field-effect mobilities than mixture of isomers have been reported, a detailed comparison of syn-isomer and anti-isomer molecules has not been carried out. In this study, we took newly synthesized pure unsubstituted syn-/anti-anthradithiophenes (ADTs) and compared their single crystal structures, physical properties and semiconducting behavior with a previously studied syn-/anti-dimethylanthradithiophenes (DMADTs). Although the both isomers were typical herringbone packing structures with similar parameters, anti-isomers involved less disordered atoms in the crystal packing. The results from thermal analysis, UV-vis spectra, photo luminescence spectra and cyclic voltammograms of syn-/anti-anthradithiophenes were nearly the in the solid state as well as in solution. However, field-effect transistors showed obvious differences with mobilities of 0.12 cm(2) V(-1) s(-1) for anti-anthradithiophene and 0.02 cm(2) V(-1) s(-1) for syn-anthradithiophene. Because the crystallinity of thin-films measured by X-ray diffraction (XRD) and atomic force microscopy (AFM) seems to be better in syn-isomers, the differences in transistor performance are likely attributed to local defects affecting intermolecular interactions, such as disorder in the crystal packing and charge-dipole interactions.

Quantum effects in the capture of charged particles by dipolar polarizable symmetric top molecules. I. General axially nonadiabatic channel treatment

The rate coefficients for capture of charged particles by dipolar polarizable symmetric top molecules in the quantum collision regime are calculated within an axially nonadiabatic channel approach. It uses the adiabatic approximation with respect to rotational transitions of the target within first-order charge-dipole interaction and takes into account the gyroscopic effect that decouples the intrinsic angular momentum from the collision axis. The results are valid for a wide range of collision energies (from single-wave capture to the classical limit) and dipole moments (from the Vogt-Wannier and fly-wheel to the adiabatic channel limit).

Comparative Study of Adsorption of O<sub>2</sub>, CO<sub>2</sub>, NO<sub>2 </sub>and SO<sub>2</sub> on Pristine and Si-Doped Carbon Nanotubes

Density functional theory is used to investigate the adsorption properties of O2, CO2, SO2 and NO2 gas molecules on pristine carbon nanotube (CNT) and Si-doped carbon nanotube (Si-CNT). All molecules except NO2 are physisorbed, with essentially no charge transfer between the CNT and molecules. The electronic properties of CNT are sensitive to the adsorption of NO2 because of its chemisorption, while they are insensitive to the O2, CO2 and SO2 molecules. The weak binding of these molecules on CNT is due to formation of charge-dipole interactions. In case of Si-CNT, all molecules are chemisorbed to the Si-C bonds with appreciable adsorption energy and significant charge transfer. The density of state analysis shows that the additional state near the Fermi level due to doping of silicon is responsible for chemisorption of the molecules. Further, our theoretical results suggest that molecule-induced modification of the density of states close to the Fermi level might significantly affect the transport properties of nanotubes.

Infrared spectroscopy of hydrated N-(2-phenylethyl)acetamide clusters: The electron-redistribution within the solute weakens local hydrogen bond

The hydrated N-(2-phenylethyl)acetamide (NPEA) clusters have been investigated in the gas phase. In the S0 state of NPEA-(H2O)2, each of two water molecules is hydrogen-bonded to the NH and CO groups, respectively, whereas these two groups are bridged with three water molecules in the S0 state of NPEA-(H2O)3. Upon photoionization of these clusters, mono- and dihydrated NPEA cluster cations are produced, where a water molecule is hydrogen-bonded to the NH group. In [NPEA-(H2O)2]+, the other water molecule is located near the CO group of NPEA+ due to a charge–dipole interaction. The electrons of NPEA+ are redistributed to enhance the total intermolecular interactions, leading to weakening the hydrogen bond in [NPEA-(H2O)2]+.

Adsorption behaviors of neutral and ionizable compounds on hybrid stationary phases in the absence (BEH-C18) and the presence (CSH-C18) of immobile surface charges

The adsorption behaviors of a neutral (caffeine) and a positively charged compound (nortriptylinium) are investigated on two RPLC/hybrid stationary phases, eluted with a low ionic strength buffer (phosphate buffer, WSpH 2.63, I=10mM). The first phase, bridge ethylene hybrid (BEH), is neutral at all pHs whereas the second, charged surface hybrid (CSH), contains a protonated ligand at WWpH <7. The band profiles of these two compounds eluted by mixture of acetonitrile and water were recorded under overloaded conditions. The adsorption isotherms of the neutral compound on both columns were well accounted for by a heterogeneous Linear-Langmuir (LL) model, which has an adsorption–desorption equilibrium constants about twice larger for caffeine on the CSH than on the BEH, due to charge–dipole interactions. In contrast, at low loadings (0.3 and 1.2μL, C=30g/L), the adsorption isotherm of the charged compound can be accounted for by a homogeneous electrostatically modified Langmuir (EML) or by a heterogeneous bi-EML implicit isotherms onto the CSH and BEH adsorbent, respectively. Electrostatic repulsions definitely account the lesser retention of the ionizable compound on CSH than on BEH. This is explained by the surface potential of CSH-C18 at 20mV and by the subsequent decrease of the equilibrium constant of weak adsorption sites (C18 environment) and removal of the strong adsorption sites (accessible silanols). At the highest sample loadings (5 and 20μL, C=30g/L), the EML and the bi-EML isotherms failed because some adsorbate–adsorbate interactions take place when bulk concentrations exceed 0.2g/L. The experimental data were then successively fitted to an empirical heterogeneous Langmuir–Moreau (LM) explicit isotherm. The best saturation capacities of the empirical heterogeneous LM isotherm is consistent with the manufacturer's estimate of the surface concentration of residual silanols onto the BEH- and CSH-C18 endcapped adsorbent (<0.1μmol/m2).

On the Azo/Hydrazo Equilibrium in Sudan I Azo Dye Derivatives

In this study, Raman, infrared, UV/vis, NMR, and single crystal X-ray diffraction spectroscopies are used to elucidate the tautomeric equilibrium of azo dyes derived from 1-phenyl-azo-2-naphthol (Sudan I). A new crystallographic structure is described for Sudan I, revealing the presence of intramolecular hydrogen bonds and supramolecular interactions, such as the unconventional C-H···O hydrogen bond type, π-stacking, and charge-dipole interactions. All of these weak intermolecular interactions play a role in the stability of the crystalline structure. Theoretical calculations are also reported for geometries, energy, and spectroscopic properties. The predicted spectra are in accordance with the experiments carried out in the solid state and in solution of dichloromethane, carbon tetrachloride, and chloroform, suggesting the hydrazo form as the preferable tautomer in gas and condensate phases for Sudan I and its derivatives.

PH-triggered, activated-state conformations of the influenza hemagglutinin fusion peptide revealed by NMR

The highly conserved first 23 residues of the influenza hemagglutinin HA2 subunit constitute the fusion domain, which plays a pivotal role in fusing viral and host-cell membranes. At neutral pH, this peptide adopts a tight helical hairpin wedge structure, stabilized by aliphatic hydrogen bonding and charge-dipole interactions. We demonstrate that at low pH, where the fusion process is triggered, the native peptide transiently visits activated states that are very similar to those sampled by a G8A mutant. This mutant retains a small fraction of helical hairpin conformation, in rapid equilibrium with at least two open structures. The exchange rate between the closed and open conformations of the wild-type fusion peptide is ~40 kHz, with a total open-state population of ~20%. Transitions to these activated states are likely to play a crucial role in formation of the fusion pore, an essential structure required in the final stage of membrane fusion.