The Electrochemical impedance spectroscopy (EIS) of three novel cathode channels designs square, boot, and triangular for open cathode polymer electrolyte cathode fuel cell stacks are analyzed. Fundamental mechanisms such as oxygen reduction reaction, proton conductivity, bulk resistance of stack, capacitance and structure features of the porous carbon electrode etc. are investigated with the help of Nyquist/Bode plots and Randles circuit. Operational parameters including airflow rate, current, H2 gas condition (humidified and dry), and stack temperature are studied focused on understanding the trend of high and low frequency resistance. The minimum resistance and temperature mapping for cross-section designs at different operating conditions is utilized for parametric optimization. Overall, it is recommended to operate the stacks at minimum resistance obtained just before the peak power density and its corresponding temperature ∼40 °C. Finally, a data-driven hybrid model integrating EIS and artificial intelligence is presented with root mean square error of ∼0.98.