Changes In Composition Research Articles

Metagenomic Analysis during Co-Digestion Buffalo Sludge and Tomato Pomace Post Thermal Stress: A Case Study

The tomato industry and buffalo farming generate waste, including sludge (BS) and tomato pomace (TP), which can significantly impact their economic and environmental sustainability. The case study tracked changes in microflora composition after a thermal shock during anaerobic co-digestion. The inoculum-to-substrate ratio was 0.5 based on volatile solid content under mesophilic conditions. An Automatic Methane Potential Test System was used to monitor the process before and after thermal stress (50°C) occurred for three days. Next-generation sequencing analyzed the bacterial and archaeal communities. The pH decreased, and methane production plateaued due to the high volatile solid content (87 g/L). After thermal stress, the pH returned to neutral, and the batch resumed biogas production. The cumulative CH4 production reached 3,115 Nml. The biogas had a maximum methane peak of 78.5% compared to 58.4% in BS. The taxonomic classification showed that Firmicutes (51.7%) and Bacteroidetes (29.9%) represented 81.6% of the total OTUs among the bacteria. Fonticella, the most abundant Clostridiaceae (average 4.3%), was absent in BS and increased (up to 17.1%) in TP during methane production. Methanocorpusculum was the most abundant in the archaeal community. However, Metanosarcina showed a stronger correlation with methane production. Brief thermal stress significantly altered bacterial and archaeal populations and allowed to resume biogas production.

Changes in Quality Characteristics and Metabolite Composition of Low-Temperature and Nitrogen-Modified Atmosphere in Indica Rice during Storage

A low temperature (LT) is used to delay grain deterioration effectively. In practical applications, a nitrogen-modified atmosphere (N2) is also an effective way of preventing grain pests and delaying grain deterioration. However, there are few studies on grain quality changes using a combination treatment of an LT and N2 during storage. In this study, the storage quality, processing characteristics, and metabolites of rice under conventional storage (CS), LT (20 °C), N2 (95%), and LT+N2 treatments were analyzed for 180 days, under a controlled humidity of 65% ± 2%. The results showed that compared to the CS, LT, and N2 treatments, the LT+N2 treatment had the best effect in retarding the increase in MDA and electrical conductivity and deferring the decrease in CAT activity. In addition, the LT+N2 treatment maintained the color of the rice better and sustained a better processing quality. Non-targeted metabolomics analysis further confirmed that the LT+N2 treatment maintained the vigor of the rice and retarded its spoilage by activating the metabolisms of amino acids, carbohydrates, and flavonoids. These results suggest a favorable practice for preventing storage deterioration and increasing the processing quality for rice storage. They provided new insights into the mechanisms of rice quality changes using the combination treatment of an LT and N2.

Potential role of bacterial pathogens in the immunopathogenesis of ovarian cancer

The development of next-generation sequencing (NGS) techniques allowed conducting research with greater efficiency and determining the microbial pattern of niches in the human body that were previously considered sterile. Observed changes in the microbiome composition of patients with cancer lesions increasingly indicate the role of microorganisms in the tumour induction and progression. Overgrowth of certain pathogenic strains within the tissue may cause inflammation, which in its chronic form may lead to destabilization of host genome. Such changes may result in altering the expression of genes encoding proteins involved in significant metabolic pathways and promote pathogenic cell functions such as proliferation stimulation, apoptosis inhibition and modulation of inflammatory response. Consequently, these events may lead to tissue destruction, disruption of physiological processes and development of disease states including cancer. In light of emerging reports on the role of changes in the composition of the microbiota in tumorigenesis induction and the presence of pathogenic strains in the ovarian cancer (OC) tumour microenvironment (TME), the hypothesis of a potential role for bacteria in the pathogenesis of this cancer is also gaining interest. The following review presents a summary of scientific research indicating potential role of TME bacteria in the immunopathogenesis of OC.

Creatine supplementation: facts and myths

Introduction: Creatine (N-methylguanidinoacetic acid) is a peptide built of three amino acids: glycine, arginine and methionine. Its function is to store energy. It is common practice to intake creatine as a dietary supplement. Because of that, we decided to try to answer the question if there are scientifically documented advantages of creatine supplementation. Review method: We analyzed the newest research conducted from 2017 to 2024. The studies were searched in online databases like PubMed and Google Scholar. We focused on the impact of creatine supplementation on the ageing population, professional athletes, the course of some diseases, cognitive functions and body composition Results: Creatine supplementation is beneficial in professional sports. There are some signals that creatine may worsen lung conditions in sportsmen. In the ageing population, creatine supplementation boosts the results of resistance training on ageing muscle performance. There are suggestions that in this population bone geometry changes due to a combination of training and creatine supplementation may be protective against hip fracture. Creatine can also enhance cognitive functions as well as lead to positive changes in body composition. Supplementation of creatine seems to reduce symptoms of long COVID-19. It may be also beneficial among children with dermatomyositis and patients with ischemic heart disease. Conclusions: Creatine supplementation may be beneficial in some populations. It can also enhance cognitive functions as well as lead to changes in body composition. Some effects of creatine supplementation are still controversial and further investigation is needed to determine its usefulness. Keywords: creatine, body composition, long COVID-19, ageing population, professional sport, cognitive functions, dermatomyositis, ischemic heart disease

Laser-based directed energy deposition of Monel K-500 and Stellite 6 multi-materials

ABSTRACT Laser-based directed energy deposition (L-DED) offers significant advantages for repairing metal structures, particularly in the marine and offshore industry where corrosion-resistant materials like Monel K-500 (a Ni-Cu alloy) lack strength and wear resistance. This study addresses this issue by producing Monel K-500 with high-strength Stellite 6 (a Co-Cr alloy). Two types of multi-material samples were created using L-DED: interlayered and mixed powder samples. The interlayered samples experienced cracking at the material interface, while the mixed powder samples were crack-free and exhibited improved mechanical properties, with yield strength increasing from 208.3 MPa to 490.2 MPa and ultimate tensile strength from 429.7 MPa to 887.0 MPa compared to single Monel K-500 samples. This research demonstrated the potential of in-situ alloying during the L-DED process to enhance alloy properties and highlighted the challenges of abrupt compositional changes leading to cracking, suggesting mitigation strategies for successful production.

Eco‐efficiency improvement strategies for disinfectants

AbstractDisinfectants are essential products for reducing health risks, but they also have significant environmental impacts. This study assessed the Eco‐efficiency of disinfectants based on the NBR ISO 14045:2014. Primary data were collected from Brazilian producers, while secondary data were obtained from patents and the Ecoinvent database. The system boundaries encompassed cradle‐to‐consumer use. The selling price was adopted as the product system value indicator (economic analysis). Raw materials production had the greatest impact on the environmental performance of disinfectants A (Antibacterial, surfactant and preservative) and C (Antibacterial, surfactant and opacifier). Disinfectant B, in addition to raw materials production (Antibacterial, opacifier and surfactant), also experienced significant impacts from consumer transport. These critical processes represent more than 60% of the overall impacts in both categories. The Eco‐efficiency matrix (profile) related environmental and economic indicators. All disinfectants occupied quadrants three or four, indicating high impact on the environmental categories. Disinfectant C had the highest Eco‐efficiency while disinfectant B had the lowest, mainly due to its product system value. Sensitivity analysis indicated environmentally viable changes in the products' composition, such as replacing the antibacterial, surfactant, preservative, and opacifier. Energy and water consumption did not significantly impact the assessed products.

Anatomy of a fumarole field: drone remote-sensing and petrological approaches reveal the degassing and alteration structure at La Fossa cone, Vulcano, Italy

Abstract. Hydrothermal alteration and mineralization processes can affect the physical and chemical properties of volcanic rocks. Aggressive acidic degassing and fluid flow often also lead to changes in the appearance of a rock, such as changes in surface coloration or intense bleaching. Although hydrothermal alteration can have far-reaching consequences for rock stability and permeability, limited knowledge exists on the detailed structures, extent, and dynamic changes that take place near the surface of hydrothermal venting systems. By integrating drone-based photogrammetry with mineralogical and chemical analyses of rock samples and surface gas flux, we investigate the structure of the evolving volcanic degassing and alteration system at the La Fossa cone on the island of Vulcano, Italy. Our image analysis combines principal component analysis (PCA) with image classification and thermal analysis through which we identify an area of approximately 70 000 m2 that outlines the maximum extent of hydrothermal alteration effects at the surface, represented by a shift in rock color from reddish to gray. Within this area, we identify distinct gradients of surface coloration and temperature that indicate a local variability in the degassing and alteration intensity and define several structural units within the fumarole field. At least seven such larger units of increased activity could be constrained. Through mineralogical and geochemical analysis of samples from the different alteration units, we define a relationship between surface appearance in drone imagery and the mineralogical and chemical composition. Gradients in surface color from reddish to gray correlate with a reduction in Fe2O3 from up to 3.2 % in the unaltered regime to 0.3 % in the altered regime, and the latter coincides with the area of increased diffuse acid gas flux. As the pixel brightness increases towards higher alteration gradients, we note a loss of the initial (igneous) mineral fraction and a change in the bulk chemical composition with a concomitant increase in sulfur content from close to 0 % in the unaltered samples to up to 60 % in samples from the altered domains. Using this approach of combined remote-sensing and in situ analyses, we define and spatially constrain several alteration units and compare them to the present-day thermally active surface and degassing pattern over the main crater area. The combined results permit us to present a detailed anatomy of the La Fossa fumarole field, including high-temperature fumaroles and seven larger units of increased alteration intensity, surface temperature, and variably intense surface degassing. Importantly, we also identify apparently sealed surface domains that prevent degassing, likely as a consequence of mineral precipitation from degassing and alteration processes. By assessing the thermal energy release of the identified spatial units quantitatively, we show that thermal radiation of high-temperature fumaroles accounts for < 50 % of the total thermal energy release only and that the larger part is emitted by diffuse degassing units. The integrated use of methods presented here has proven to be a useful combination for a detailed characterization of alteration and activity patterns of volcanic degassing sites and has the potential for application in alteration research and for the monitoring of volcanic degassing systems.

Impact of fruit reserve conditions from harvest to processing on the chemical composition and quality of coffee

Changes in the different stages of fruit processing are becoming a differentiating factor in coffee quality. Currently, generating delays in the processing of the fruit, that is, reserve, is a practice that can modify the sensory profile of the beverage. In this study, the fruit was reserved in three stages of maturity, two temperatures (15° and 20°C) and at two timepoints (24 and 48 h), establishing its chemical composition and sensory characteristics using analytical techniques such as liquid and gas chromatography. The state of maturity 1 showed an effect on malic and quinic acids due to the interaction of temperature and reserve time, while stage of maturity 3 showed an effect on glucose and fructose. The state of maturity 2 showed an effect of the reserve time on the same compounds of states 1 and 3, in addition to the content of defective beans and sucrose. The sensory quality expressed as the total SCA (Specialty Coffee Association) score and the attributes did not show treatments effect, the reserve of the fruit under the evaluated conditions presents an effect on the descriptors of the flavor. Extending the fruit reserve time from 24 to 48 h showed an increase in the groups of flavor descriptors associated with fruit and red fruits from 33.33 to 66.66% and from 34.04 to 65.95%. This implies that the constituent parts of the fruit such as the exocarp and mesocarp interact with the bean, leading to changes in the chemical composition and the improvement of the qualitative complexity of the sensory quality. This is a consequence of the increase in the frequency of the flavor descriptors of the fruit and red fruit category.

Effects of Ageing on Surface Properties of Biochar and Bioavailability of Heavy Metals in Soil

This study aims to explore the effects of biochar ageing on its surface properties and the bioavailability of heavy metals in soil. The biochar was subjected to chemical oxidation/dry–wet cycles (CDWs), chemical oxidation/freeze–thaw cycles (CFTs), and natural ageing (NT) to analyze changes in the elemental composition, pH, specific surface area, pore volume, and surface functional groups. Fourier transform infrared spectroscopy (FTIR) and scanning electron microscopy (SEM) were applied to characterize the functional groups and microstructure, and the BCR sequential extraction method was employed to demonstrate the fractionation distribution of Cu, Cd, and Pb. The results showed that the CDWs and CFTs treatments significantly reduced the carbon content of the biochar (with a maximum reduction to 47.70%), increased the oxygen content (up to 49.17%), and notably increased the specific surface area and pore volume. The pH decreased significantly from 9.91 to 4.92 and 4.99 for the CDWs and the CFTs, respectively. The FTIR analysis indicated notable changes in hydroxyl and carboxyl functional groups, and the SEM revealed severe microstructural damage in biochar after the CDWs and CFTs treatments. The heavy metal fractionation analysis indicated that exchangeable Cu, Cd, and Pb significantly increased after the CDWs treatment, reaching 31.40%, 5.25%, and 6.79%, respectively. In conclusion, biochar ageing significantly affects its physicochemical properties and increases the bioavailability of heavy metals, raising concerns about its long-term remediation effectiveness.

Short-term gut microbiota's shift after laparoscopic Roux-en-Y vs one anastomosis gastric bypass: results of a multicenter randomized control trial.

Roux-en-Y (RYGB) and one anastomosis gastric bypass (OAGB) represent two of the most used bariatric/metabolic surgery (BMS) procedures. Gut microbiota (GM) shift after bypass surgeries, currently understated, may be a possible key driver for the short- and long-term outcomes. Prospective, multicenter study enrolling patients with severe obesity, randomized between OAGB or RYGB. Fecal and blood samples were collected, pre- (T0) and 24months postoperatively (T1). GM was determined by V3-V4 16S rRNA regions sequencing and home-made bioinformatic pipeline based on Qiime2 plugin and R packages. To compare OAGB vs RYGB microbiota profile at T1 and its impact on metabolic and nutritional status. 54 patients completed the study, 27 for each procedure. An overall significant variation was detected in anthropometric and serum nutritional parameters at T1, with a significant, similar decrease in overall microbial alpha and beta diversity observed in both groups. An increase in relative abundances of Actinobacteria and Proteobacteria and a reduction of Bacteroidetes, no significant changes in Firmicutes and Verrucomicrobia, with an increase of the Firmicutes/Bacteroidetes ratio were observed. BMS promotes a dramatic change in GM composition. This is the first multicenter, RCT evaluating the impact of OAGB vs Roux-en-Y bypass on GM profile. The bypass technique per se did not impact differently on GM or other examined metabolic parameters. The emergence of slightly different GM profile postoperatively may be related to clinical conditions or may influence medium or long-term outcomes and as such GM profile may represent a biomarker for bariatric surgery's outcomes.

MICROWAVE HEATING EFFECT ON THE OXIDATION AND QUALITY OF COLD-PRESSED SUNFLOWER OIL

Sunflower oil is widely used in the human diet, primarily due to its constituent components and its applications in producing functional products. The use of microwave ovens in food preparation has become widespread in recent years due to certain advantages that include saving time, energy and convenience. As a result of heat treatment of oils, various chemical reactions can occur, leading to the formation of products that may indicate deterioration or a reduction in quality. For this purpose, untreated oil (not subjected to heating) and oil heated in a microwave oven for varying durations (ranging from 4 to 20 minutes) were analyzed in this study. The quality assessment of cold-pressed sunflower oil was conducted using standard official methods to measure peroxide, acid, and iodine values. The progression of oil oxidation was tracked by analyzing conjugated dienes and conjugated trienes through UV-spectroscopy (method AOCS Ch 5-91). Additionally, considering the theoretical link between microwave heating and changes in fatty acid composition, the fatty acid profile of the oil was determined according to MKC EN ISO 12966-4:2015. The results indicate a notable shift in the peroxide value (PV). Specifically, after heating the oil for 4 minutes, the PV exceeds the permitted limits. Furthermore, a decrease in the iodine value is observed with increasing heating time, while no significant changes are noted in the acid value. Additionally, changes in the content of fatty acids are observed in cold-pressed sunflower oil. At specific wavelengths (232 and 268 nm), conjugated dienes and trienes were detected as oxidation products, i.e. the extinction coefficients (K232) and (K268) fell within the ranges of 3,72-4,16 and 1,25-2,56, respectively. These findings lead to the conclusion that microwave heating induces changes in the quality of cold-pressed sunflower oil. To maintain its quality, an appropriate choice of heat treatment is required.

In vitro versus cryo-induced capacitation of bovine spermatozoa, part 3: Compositional and molecular changes to the plasma membrane

The aim of this study was to assess the level of membrane cryodamage through the levels of selected capacitation and apoptosis-associated proteins, together with compositional membrane changes in capacitated (CAP), cryopreserved (CRYO) and non-capacitated bovine spermatozoa (CRTL). Sperm kinetic parameters were analyzed by the computer assisted sperm analysis (CASA) while the capacitation patterns were examined with the chlortetracycline (CTC) assay. In the case of DNA integrity, sperm chromatin structure assay and aniline blue staining were used. For the quantification of fatty acid content gas chromatography was performed. Using Western blotting the expression of capacitation (protein kinase C – PKC; phospholipases A2 and Cζ – PLA2, PLCζ; soluble adenylyl cyclase 10 – sAC10) and apoptosis-associated (apoptosis regulator Bax; B-cell lymphoma 2 – Bcl-2; caspase 3) proteins were evaluated. Data indicate a significant decline (p < 0.0001) of sperm kinetic parameters and higher occurrence (p < 0.0001) of DNA fragmentation in the CRYO group. CTC assay revealed a significant increase of acrosome-reacted spermatozoa in the CRYO group when compared to others. Compositional changes in the sperm membrane were visible as a notable decline of docosahexaenoic acid (p < 0.0001) associated with a significant decrease of membrane cholesterol (p < 0.05) and proteins (p < 0.0001) in the CRYO group while the amount of palmitic, stearic, oleic, and linoleic acid increased (p < 0.0001) significantly. Protein expression of all capacitation-associated proteins (PKC, PLA2, PLCζ, sAC10) was significantly down-regulated (p < 0.001; p < 0.0001) in the CRYO group. Relative quantification of apoptosis-associated proteins revealed increased Bax and decreased Bcl-2 levels in the CRYO group, except for caspase-3, which remained without significant changes.

ASO Visual Abstract: Dynamic Anthropometrics in Pancreatic Cancer-Associations Between Body Composition Changes During Neoadjuvant Therapy and Survival Outcomes After Resection.

ASO Visual Abstract: Dynamic Anthropometrics in Pancreatic Cancer-Associations Between Body Composition Changes During Neoadjuvant Therapy and Survival Outcomes After Resection.

Understanding processes underlying cross-taxon congruence in species composition along elevational gradients

Changes in species diversity of different taxa along environmental gradients are usually correlated, resulting in a pattern called cross-taxon congruence. This pattern can be due to functional relationships between taxa, a common response to niche-related processes, or stochastic processes. However, it remains unclear the extent to which they contribute to the association among patterns of changes in species composition, (i.e., beta diversity), and whether these changes are related to species nestedness and turnover. Here we described patterns of change in the taxonomic composition of plant and orthopteran assemblages along an elevational gradient in Cordoba province, central Argentina. We assessed cross-taxon congruence and identified the main environmental variables accounting for such patterns. Mantel correlations showed congruence between the patterns of taxonomic dissimilarity of plants and orthopterans. According Generalized disiimilarity models (GDM) the main environmental variables driving the patterns were temperature for both taxa, and changes in soil nutrient content for plants, spatial effects were also found. Beta diversity was mainly due to species turnover for orthopterans and plants, indicating replacement by species adapted to elevational conditions. Niche-related process, such as environmetal filtering, along with neutral processes may have contributed to cross-taxon congruence in beta diversity.

Evaluating the coral microbiome during cryopreservation

Coral reefs are threatened by various local and global stressors, including elevated ocean temperatures due to anthropogenic climate change. Coral cryopreservation could help secure the diversity of threatened corals. Recently, isochoric vitrification was used to demonstrate that coral fragments lived to 24 hr post-thaw; however, in this study, they were stressed post-thaw. The microbial portion of the coral holobiont has been shown to affect host fitness and the impact of cryopreservation treatment on coral microbiomes is unknown. Therefore, we examined the coral-associated bacterial communities pre- and post-cryopreservation treatments, with a view towards informing potential future stress reduction strategies. We characterized the microbiome of the Hawaiian finger coral, Porites compressa in the wild and at seven steps during the isochoric vitrification process. We observed significant changes in microbiome composition, including: 1) the natural wild microbiomes of P. compressa were dominated by Endozoicomonadaceae (76.5 % relative abundance) and consistent between samples, independent of collection location across Kāneʻohe Bay; 2) Endozoicomonadaceae were reduced to <6.9 % in captivity, and further reduced to <0.5 % relative abundance after isochoric vitrification; and 3) Vibrionaceae dominated communities post-thaw (58.5–74.7 % abundance). Thus, the capture and cryopreservation processes, are implicated as possible causal agents of dysbiosis characterized by the loss of putatively beneficial symbionts (Endozoicomonadaceae) and overgrowth of potential pathogens (Vibrionaceae). Offsetting these changes with probiotic restoration treatments may alleviate cryopreservation stress and improve post-thaw husbandry.

Transcriptional profiling elucidates biofilm functionality in the dynamic environment of an enhanced biological phosphorus removal reactor

ABSTRACT Recently, biofilms, complex and dynamic structures of microorganisms, have been applied to enhanced biological phosphorus removal (EBPR), a wastewater treatment configuration dependent on cyclic shifts between anaerobic and aerobic conditions. In this study, comparative metagenomics and metatranscriptomics were performed on biofilms collected from seven sites of a moving-bed-biofilm-reactor-based EBPR process. The aim was to examine the functional ecology of phosphorus-accumulating biofilms throughout a single EBPR cycle. Taxonomic profiling revealed high microbial diversity, stable throughout the EBPR cycle. The dominant phosphorus-accumulating organisms (PAOs) were identified as Candidatus accumulibacter, Candidatus phosphoribacter, and Candidatus lutibacillus. However, these did not show the highest transcriptional activities. Propionivibrio, a potential glycogen-accumulating organism, was the most transcriptionally active. Comparative analysis of biofilms from different EBPR stages showed a progressive change in metatranscriptome composition, correlating with nutrient removal. Analysis of differentially expressed genes in abundant PAOs revealed key genes associated with the uptake of phosphorus, degradation of glycogen, biosynthesis of polyhydroxyalkanoates, and acetate production. In conclusion, this study reveals that biofilms possess the capability to adapt to environmental fluctuations primarily through alterations in microbial gene expression activity and subsequent metabolic modulation, and dominant taxa may not necessarily exhibit the highest transcriptional activity in complex microbial communities.

Bioinspired Spectrally Selective Phase‐Change Composites for Enhanced Solar Thermal Energy Storage

AbstractIntegrating solar thermal conversion with phase change materials (PCMs) offers a promising pathway for continuous thermal energy generation with a zero‐carbon footprint. However, substantial infrared radiation losses at elevated temperatures often hinder the efficiency of such integrated systems. Inspired by the thermoregulation mechanisms of polar bears, this work introduces composite PCMs with spectrally selective absorption to enhance solar thermal energy storage efficiency. These composite phase change materials (CPCMs), featuring densely packed SiC ceramic grains with high porosity, exhibit a thermal conductivity of up to 14 W m−1 K−1 and an energy storage density of 195.1 kJ kg−1. The incorporation of nanoparticle‐coated foil induces a plasmonic effect that increases solar absorptivity to 90.57% and reduces infrared emissivity from 71.94% to 7.47%. Consequently, the solar thermal storage efficiency is significantly increased from 54.56% to 81.65% at 500 K, effectively addressing the challenges associated with high‐temperature solar thermal storage. Additionally, the low infrared emissivity of the c (PNC), combined with the inherent heat absorption properties of PCMs, enables infrared stealth functionality. These multifunctional CPCMs demonstrate considerable potential for advancing high‐temperature solar thermal storage technologies and other heat‐related applications.

Resilience of socio-technical transportation systems: A demand-driven community detection in human mobility structures

Existing scholarship on transportation resilience analysis has primarily focused on engineering resilience, often overlooking the intricate socio-technical dimensions. This oversight underscores the necessity for a more comprehensive understanding of the dynamic interplay between social, including travel behaviors, and technical infrastructure components within transportation systems. This article delves into the impact of “social shocks” on transportation systems, which are defined as disturbances affecting the social subsystem without yet affecting the technical subsystem. Drawing inspiration from C.S. Holling’s ecological resilience, which signifies a system’s ability to cope with change by adapting its structure and functionality, we propose a multi-level resilience assessment framework. It encompasses four mobility-related indicators: entropy (measuring network-level complexity), stationarity (assessing community compositional changes at the cluster level), and two node-level metrics — within-module degree and weighted participation coefficient — capturing location connectivity. These indicators proxy for evaluating the mobility structure and node functionality within the social subsystem. In a case study, we analyze historical smart card data to examine the mobility pattern’s structural changes within Hong Kong, a rail-oriented metropolis, during a prolonged and city-wide protest. The framework and associated indicators provide an alternative perspective for transit planners and operators, allowing them to assess both the overall system and individual stations, moving beyond traditional assessments of service supply and patronage changes.

Proteomic analysis revealed the deterioration of surimi gelling capability to fish stress during transportation

Live silver carp with various transportation durations (3 h, 6 h, 12 h and 24 h) was processed into surimi. Proteomics and other technical methods were applied to investigate the changes in protein composition and structure aiming to explore the mechanism through which transportation stress affects gelling capability of surimi. As the transportation time was prolonged from 3 to 24 h, the gel strength of surimi gel decreased by 28.97 %, and the whiteness value decreased significantly (p < 0.05). Moreover, malondialdehyde content in fish serum and surface hydrophobicity of surimi also increased significantly (p < 0.05), suggesting that oxidation induced protein unfolding. Proteomic analysis identified eleven significantly differential proteins in the samples after 24 h of transportation compared to those transported for 3 h. Notably, the expression levels of myosin heavy chain and glutathione peroxidase were significantly down-regulated. Additionally, the PI3K-Akt signaling pathway was activated. Prolonged transportation time resulted in a looser microstructure of surimi gels, increased free water content and uneven water distribution. These results indicated that the altered properties of surimi gel due to transportation stress are primarily related to oxidative stress which leads to oxidative denaturation of proteins and the degradation of myosin.

Age-dependent changes in cytochrome P450 abundance and composition in human liver.

Cytochrome P450 (CYP) superfamily represents the major drug metabolizing enzymes responsible for metabolizing over 65% of therapeutic drugs, including those for pediatric use. CYP-ontogeny based physiologically-based pharmacokinetic (PBPK) models have emerged as useful tools to mechanistically extrapolate adult pharmacokinetic data to children. However, these models integrate physiological differences in pediatric population including age-dependent differences in the abundances of CYP enzymes. Conventionally, developmental changes in CYP enzymes have been reported using protein abundance and activity data from subcellular fractions such as microsomes, which is prone to high technical variability. Similarly, the available pediatric pharmacokinetic data suffer from the lack of specific CYP substrates, especially in younger children. In the present study, we utilized viable hepatocytes from 50 pediatric (age, day 1- 18 yr) and 8 adult human donors and carried out global proteomics-based quantification of all major hepatic CYP enzymes, including orphan enzymes that have not been studied previously. While CYPs 2B6, 3A5, 4A11, 4F3, and 4V2 did not show significant association with age, all other quantified isoforms either increased or decreased with age. CYPs 1A2, 2C8, 2C18, and 2C19 were absent or barely detected in the neonatal group, while CYP3A7 was the highest in this group. The >1-2 yr age-group showed the highest total abundance of all CYP enzymes. The age-dependent differences in CYP enzymes reported in this study can be used to develop ontogeny-based PBPK models, which in turn can help improve pediatric dose-prediction based on adult dosing, leading to safer drug pharmacology in children. Significance Statement We quantified age-dependent differences in the abundances of hepatic CYP enzymes using a large set of viable pediatric and adult hepatocytes using quantitative global proteomics. We report for the first time the ontogeny in the abundance of CYP enzymes in human hepatocytes, especially, orphan CYPs 20A1, 27A1, 51A1, 7B1, and 8B1 and the CYP4 subfamily of enzymes. Our study provides important data about CYP ontogeny that can be used for the better prediction of pediatric pharmacokinetics using physiologically-based pharmacokinetic modeling.