Abstract The current report presents our initial findings on the immune response to C. difficile infection (CDI) in an acute mouse model. 5-8 week old male C57BL/6 mice were either left untreated or received a cocktail of 5 antibiotics in drinking water for 3 days followed by a single intra-peritoneal dose of clindamycin. The antibiotic-treated mice were then infected with 105 CFUs of the C. difficile strain VPI10463 and sacrificed 42 hours later. Flow-cytometric study of the spleens, mesenteric lymph nodes (MLN), colons and ceca of the infected mice showed a significant increase in the numbers of B cells, CD4 and CD8 T cells, FOXP3+ CD4 cells, NK cells and neutrophils in the colons and ceca, as well as cells of the monocyte/macrophage lineage and dendritic cells in the ceca of the infected mice. The spleens and MLN of the infected mice did not display such an increase. A substantial fraction of the recruited neutrophils in the colons and ceca of the infected mice displayed upregulated levels of CD11b, whereas a similar fraction of CD4 and CD8 cells in the colons and ceca of uninfected and infected mice showed an upregulated level of CD69. Multiplex qPCR analysis of colonic and cecal tissue from the infected mice showed a significant increase in the mRNA levels of numerous neutrophil-attracting chemokines and a number of cytokines produced in an innate immune response, but no indication of T cell polarization, thereby collectively underscoring the innate, local nature of the response.