In this paper, the humidity-sensing characteristics of gelatin were compared with those of poly(vinyl alcohol) (PVA) at L-band (1 ~ 2 GHz) microwave frequencies. A capacitive microwave sensor based on a defected ground structure with a modified interdigital capacitor (DGS-MIDC) in a microstrip transmission line operating at 1.5 GHz without any coating was used. Gelatin is a natural polymer based on protein sourced from animal collagen, whereas PVA is a high-sensitivity hydrophilic polymer that is widely used for humidity sensors and has a good film-forming property. Two DGS-MIDC-based microwave sensors coated with type A gelatin and PVA, respectively, with a thickness of 0.02 mm were fabricated. The percent relative frequency shift (PRFS) and percent relative magnitude shift (PRMS) based on the changes in the resonant frequency and magnitude level of the transmission coefficient for the microwave sensor were used to compare the humidity-sensing characteristics. The relative humidity (RH) was varied from 50% to 80% with a step of 10% at a fixed temperature of around 25 °C using a low-reflective temperature and humidity chamber manufactured with Styrofoam. The experiment's results show that the capacitive humidity sensitivity of the gelatin-coated microwave sensor in terms of the PRFS and PRMS was higher compared to that of the PVA-coated one. In particular, the sensitivity of the gelatin-coated microwave sensor at a low RH from 50% to 60% was much greater compared to that of the PVA-coated one. In addition, the relative permittivity of the fabricated microwave sensors coated with PVA and gelatin was extracted by using the measured PRFS and the equation was derived by curve-fitting the simulated results. The change in the extracted relative permittivity for the gelatin-coated microwave sensor was larger than that of the PVA-coated one for varying the RH.