Canopy Height Estimation Research Articles

Analysis of Plant Height Changes of Lodged Maize Using UAV-LiDAR Data

Lodging stress seriously affects the yield, quality, and mechanical harvesting of maize, and is a major natural disaster causing maize yield reduction. The aim of this study was to obtain light detection and ranging (LiDAR) data of lodged maize using an unmanned aerial vehicle (UAV) equipped with a RIEGL VUX-1UAV sensor to analyze changes in the vertical structure of maize plants with different degrees of lodging, and thus to use plant height to quantitatively study maize lodging. Based on the UAV-LiDAR data, the height of the maize canopy was retrieved using a canopy height model to determine the height of the lodged maize canopy at different times. The profiles were analyzed to assess changes in maize plant height with different degrees of lodging. The differences in plant height growth of maize with different degrees of lodging were evaluated to determine the plant height recovery ability of maize with different degrees of lodging. Furthermore, the correlation between plant heights measured on the ground and LiDAR-estimated plant heights was used to verify the accuracy of plant height estimation. The results show that UAV-LiDAR data can be used to achieve maize canopy height estimation, with plant height estimation accuracy parameters of R2 = 0.964, RMSE = 0.127, and nRMSE = 7.449%. Thus, it can reflect changes of plant height of lodging maize and the recovery ability of plant height of different lodging types. Plant height can be used to quantitatively evaluate the lodging degree of maize. Studies have shown that the use of UAV-LiDAR data can effectively estimate plant heights and confirm the feasibility of LiDAR data in crop lodging monitoring.

Democratic Republic of the Congo Tropical Forest Canopy Height and Aboveground Biomass Estimation with Landsat-8 Operational Land Imager (OLI) and Airborne LiDAR Data: The Effect of Seasonal Landsat Image Selection

Inventories of tropical forest aboveground biomass (AGB) are often imprecise and sparse. Increasingly, airborne Light Detection And Ranging (LiDAR) and satellite optical wavelength sensor data are used to map tree height and to estimate AGB. In the tropics, cloud cover is particularly prevalent and so several years of satellite observations must be considered. This may reduce mapping accuracy because of seasonal and inter-annual changes in the forest reflectance. In this paper, the sensitivity of airborne LiDAR and Landsat-8 Operational Land Imager (OLI) based dominant canopy height and AGB 30 m mapping is assessed with respect to the season of Landsat acquisition for a ~10,000 Km2 tropical forest area in the Democratic Republic of the Congo. A random forest regression estimator is used to predict and assess the 30 m dominant canopy height using LiDAR derived test and training data. The AGB is mapped using an allometric model parameterized with the dominant canopy height and is assessed by comparison with field based 30 m AGB estimates. Experiments are undertaken independently using (i) only a wet season Landsat-8 image, (ii) only a dry season Landsat-8 image, and (iii) both Landsat-8 images. At the study area level there is little reported sensitivity to the season of Landsat image used. The mean dominant canopy height and AGB values are similar between seasons, within 0.19 m and 5 Mg ha−1, respectively. The mapping results are improved when both Landsat-8 images are used with Root Mean Square Error (RMSE) values that correspond to 18.8% of the mean study area mapped tree height (20.4 m) and to 41% of the mean study area mapped AGB (204 Mg ha−1). The mean study area mapped AGB is similar to that reported in other Congo Basin forest studies. The results of this detailed study are illustrated and the implications for tropical forest tree height and AGB mapping are discussed.

Use of local and global maps of forest canopy height and aboveground biomass to enhance local estimates of biomass in miombo woodlands in Tanzania

Field surveys are often a primary source of aboveground biomass (AGB) data, but plot-based estimates of parameters related to AGB are often not sufficiently precise, particularly not in tropical countries. Remotely sensed data may complement field data and thus help to increase the precision of estimates and circumvent some of the problems with missing sample observations in inaccessible areas. Here, we report the results of a study conducted in a 15,867 km² area in the dry miombo woodlands of Tanzania, to quantify the contribution of existing canopy height and biomass maps to improving the precision of canopy height and AGB estimates locally. A local and a global height map and three global biomass maps, and a probability sample of 513 inventory plots were subject to analysis. Model-assisted sampling estimators were used to estimate mean height and AGB across the study area using the original maps and then with the maps calibrated with local inventory plots. Large systematic map errors – positive or negative – were found for all the maps, with systematic errors as great as 60–70 %. The maps contributed nothing or even negatively to the precision of mean height and mean AGB estimates. However, after being calibrated locally, the maps contributed substantially to increasing the precision of both mean height and mean AGB estimates, with relative efficiencies (variance of the field-based estimates relative to the variance of the map-assisted estimates) of 1.3–2.7 for the overall estimates. The study, although focused on a relatively small area of dry tropical forests, illustrates the potential strengths and weaknesses of existing global forest height and biomass maps based on remotely sensed data and universal prediction models. Our results suggest that the use of regional or local inventory data for calibration can substantially increase the precision of map-based estimates and their applications in assessing forest carbon stocks for emission reduction programs and policy and financial decisions.

Comparing canopy height estimates from satellite-based photogrammetry, airborne laser scanning and field measurements across Australian production and conservation eucalypt forests

ABSTRACTAirborne Laser Scanning (ALS) generates accurate data for calculating forest metrics, such as canopy height, yet can be cost-prohibitive. Satellite-based stereo pair photogrammetry has the potential to overcome this limitation of ALS to facilitate multi-temporal change analysis when ALS data capture is unfeasible; however, it remains largely untested across Australian conservation and production eucalypt forests. This study examined root-mean-square differences (RMSD) between canopy height measurements derived from ALS, field measurements and satellite-based photogrammetry for a spotted gum (Corymbia citriodora) plantation and scribbly gum (Eucalyptus racemosa) woodland in south-east Queensland, Australia. The comparison found satellite-based photogrammetry under predicted canopy height compared to field measurements and ALS, whilst the RMSD indicated low performance for satellite-based photogrammetry across the eucalypt plantation and woodland. The open and heterogenous forest structure typical in eucalypt forests combined with low point cloud density for photogrammetry to inadequately sample the canopy and increase stereo matching errors; which was exacerbated across the open and heterogenous scribbly gum woodland. Current satellite-based photogrammetry is therefore unlikely to provide a viable alternative to ALS when analysing canopy height across eucalypt forests at high-resolution. General surface analysis across large areas of eucalypt forest at moderate resolution, or airborne photogrammetric methods, could demonstrate increased viability as an alternative to ALS.

Inter-comparison of remote sensing platforms for height estimation of mango and avocado tree crowns

To support the adoption of precision agricultural practices in horticultural tree crops, prior research has investigated the relationship between crop vigour (height, canopy density, health) as measured by remote sensing technologies, to fruit quality, yield and pruning requirements. However, few studies have compared the accuracy of different remote sensing technologies for the estimation of tree height. In this study, we evaluated the accuracy, flexibility, aerial coverage and limitations of five techniques to measure the height of two types of horticultural tree crops, mango and avocado trees. Canopy height estimates from Terrestrial Laser Scanning (TLS) were used as a reference dataset against height estimates from Airborne Laser Scanning (ALS) data, WorldView-3 (WV-3) stereo imagery, Unmanned Aerial Vehicle (UAV) based RGB and multi-spectral imagery, and field measurements. Overall, imagery obtained from the UAV platform were found to provide tree height measurement comparable to that from the TLS (R2 = 0.89, RMSE = 0.19 m and rRMSE = 5.37 % for mango trees; R2 = 0.81, RMSE = 0.42 m and rRMSE = 4.75 % for avocado trees), although coverage area is limited to 1–10 km2 due to battery life and line-of-sight flight regulations. The ALS data also achieved reasonable accuracy for both mango and avocado trees (R2 = 0.67, RMSE = 0.24 m and rRMSE = 7.39 % for mango trees; R2 = 0.63, RMSE = 0.43 m and rRMSE = 5.04 % for avocado trees), providing both optimal point density and flight altitude, and therefore offers an effective platform for large areas (10 km2–100 km2). However, cost and availability of ALS data is a consideration. WV-3 stereo imagery produced the lowest accuracies for both tree crops (R2 = 0.50, RMSE = 0.84 m and rRMSE = 32.64 % for mango trees; R2 = 0.45, RMSE = 0.74 m and rRMSE = 8.51 % for avocado trees) when compared to other remote sensing platforms, but may still present a viable option due to cost and commercial availability when large area coverage is required. This research provides industries and growers with valuable information on how to select the most appropriate approach and the optimal parameters for each remote sensing platform to assess canopy height for mango and avocado trees.

Customizing unmanned aircraft systems to reduce forest inventory costs: can oblique images substantially improve the 3D reconstruction of the canopy?

ABSTRACT Photogrammetry makes it possible to estimate forest canopy surface at lower costs than light detection and ranging (LiDAR), which is considered the best data source to evaluate forest structure. Recent studies even suggest that points of forest understories can be obtained by means of unmanned aerial photogrammetry. However, little is known about how the characteristics of image sets, processing workflows, and forest openness affect understory point surveying. For forest inventories, unmanned aircraft systems (UASs) of fixed-wing type are preferred because they can survey large areas. It has been shown that the accuracy of UAS photogrammetry tends to increase by adding oblique images but acquiring them with fixed-wing UASs is challenging. To address this challenge, we proposed a multi-camera array for acquiring oblique images with fixed-wing UASs. To test our idea, we built two customized UAS and surveyed an open pine plantation and a tall deciduous forest with variable overstory density. The open plantation was selected for optimizing the measurement of reference canopy surface points using a terrestrial laser scanner. In the deciduous forest, we obtained reference understory points from a leaf-off photogrammetry survey. We confirm that including oblique images in the image set is a good practice for forestry applications. Using the UASs to test whether a multi-camera system is better than a single-camera system for acquiring nadir-oblique image sets, we conclude that the advantages are (1) more efficient acquisition of oblique images and (2) better understory modelling in open canopies. The multi-camera acquisition of oblique images increases the understory point density, making the estimation of crown cover percentage and maximum canopy height more accurate, by 33% and 50%, respectively.

Corrections to “A Machine-Learning Approach to PolInSAR and LiDAR Data Fusion for Improved Tropical Forest Canopy Height Estimation Using NASA AfriSAR Campaign Data” [Oct 19 3453-3463

This paper investigates the benefits of integrating multibaseline polarimetric interferometric SAR (PolInSAR) data with LiDAR measurements using a machine-learning approach in order to obtain improved forest canopy height estimates. Multiple interferometric baselines are required to ensure consistent height retrieval performance across a broad range of tree heights. Previous studies have proposed multibaseline merging strategies using metrics extracted from PolInSAR measurements. Here, we introduce the multibaseline merging using a support vector machine trained by sparse LiDAR samples. The novelty of this method lies in the new way of combining the two datasets. Its advantage is that it does not require a complete LiDAR coverage, but only sparse LiDAR samples distributed over the PolInSAR image. LiDAR samples are not used to obtain the best height among a set of height stacks, but rather to train the retrieval algorithm in selecting the best height using the variables derived through PolInSAR processing. This enables more accurate height estimation for a wider scene covered by the SAR with only partial LiDAR coverage. We test our approach on NASA AfriSAR data acquired over tropical forests by the L-band UAVSAR and the LVIS LiDAR instruments. The estimated height from this approach has a higher accuracy (r2 = 0.81, RMSE = 7.1 m) than previously introduced multibaseline merging approach (r2 = 0.67, RMSE = 9.2 m). This method is beneficial to future spaceborne missions, such as GEDI and BIOMASS, which will provide a wealth of near-contemporaneous LiDAR samples and PolInSAR measurements for mapping forest structure at global scale.

Structural characterisation of mangrove forests achieved through combining multiple sources of remote sensing data

Temporal information on mangrove extent, age, structure and biomass provides an important contribution towards understanding the role of these ecosystems in terms of the services they provide (e.g., in relation to storage of carbon, conservation biodiversity), particularly given the diversity of influences of human activity and natural events and processes. Focusing on the Matang Mangrove Forest Reserve (MMFR) in Perak Province, Peninsular Malaysia, this study aimed to retrieve comprehensive information on the biophysical properties of mangroves from spaceborne optical and Synthetic Aperture Radar (SAR) to support better understanding of their dynamics in a managed setting. For the period 1988 to 2016 (29 years), forest age was estimated on at least an annual basis by combining time-series of Landsat-derived Normalised Difference Moisture Index (NDMI) and Japanese L-band Synthetic Aperture Radar (SAR) data. The NDMI was further used to retrieve canopy cover (%). Interferometric Shuttle Radar Topographic Mission (SRTM) X/C-band (2000), TanDEM-X-band (2010–2016) and stereo WorldView-2 stereo (2016) data were evaluated for their role in estimating canopy height (CH), from which above ground biomass (AGB, Mg ha−1) was derived using pre-established allometry. Whilst both L-band HH and HV data increased with AGB after about 8–10 years of growth, retrieval was compromised by mixed scattering from varying amounts of dead woody debris following clearing and wood material within regenerating forests, thinning of trees at ~15 and 20 years, and saturation of L-band SAR data after approximately 20 years of growth. Reference was made to stereo Phantom-3 DJI stereo imagery to support estimation of canopy cover (CC) and validation of satellite-derived CH. AGB estimates were compared with ground-based measurements. Using relationships with forest age, both CH and AGB were estimated for each date of Landsat or L-band SAR observation and the temporal trends in L-band SAR were shown to effectively track the sequences of clearing and regeneration. From these, four stages of the harvesting cycle were defined. The study provided new information on the biophysical properties and growth dynamics of mangrove forests in the MMFR, inputs for future monitoring activities, and methods for facilitating better characterisation and mapping of mangrove areas worldwide.

Canopy Height Estimation from Single Multispectral 2D Airborne Imagery Using Texture Analysis and Machine Learning in Structurally Rich Temperate Forests

Canopy height is a fundamental biophysical and structural parameter, crucial for biodiversity monitoring, forest inventory and management, and a number of ecological and environmental studies and applications. It is a determinant for linking the classification of land cover to habitat categories towards building one-to-one relationships. Light detection and ranging (LiDAR) or 3D Stereoscopy are the commonly used and most accurate remote sensing approaches to measure canopy height. However, both require significant time and budget resources. This study proposes a cost-effective methodology for canopy height approximation using texture analysis on a single 2D image. An object-oriented approach is followed using land cover (LC) map as segmentation vector layer to delineate landscape objects. Global texture feature descriptors are calculated for each land cover object and used as variables in a number of classifiers, including single and ensemble trees, and support vector machines. The aim of the analysis is the discrimination among classes in a wide range of height values used for habitat mapping (from less than 5 cm to 40 m). For that task, different spatial resolutions are tested, representing a range from airborne to spaceborne quality ones, as well as their combinations, forming a multiresolution training set. Multiple dataset alternatives are formed based on the missing data handling, outlier removal, and data normalization techniques. The approach was applied using orthomosaics from DMC II airborne images, and evaluated against a reference LiDAR-derived canopy height model (CHM). Results reached overall object-based accuracies of 67% with the percentage of total area correctly classified exceeding 88%. Sentinel-2 simulation and multiresolution analysis (MRA) experiments achieved even higher accuracies of up to 85% and 91%, respectively, at reduced computational cost, showing potential in terms of transferability of the framework to large spatial scales.

The Forest Observation System, building a global reference dataset for remote sensing of forest biomass

Forest biomass is an essential indicator for monitoring the Earth’s ecosystems and climate. It is a critical input to greenhouse gas accounting, estimation of carbon losses and forest degradation, assessment of renewable energy potential, and for developing climate change mitigation policies such as REDD+, among others. Wall-to-wall mapping of aboveground biomass (AGB) is now possible with satellite remote sensing (RS). However, RS methods require extant, up-to-date, reliable, representative and comparable in situ data for calibration and validation. Here, we present the Forest Observation System (FOS) initiative, an international cooperation to establish and maintain a global in situ forest biomass database. AGB and canopy height estimates with their associated uncertainties are derived at a 0.25 ha scale from field measurements made in permanent research plots across the world’s forests. All plot estimates are geolocated and have a size that allows for direct comparison with many RS measurements. The FOS offers the potential to improve the accuracy of RS-based biomass products while developing new synergies between the RS and ground-based ecosystem research communities.

Estimating Forest Canopy Height Using MODIS BRDF Data Emphasizing Typical-Angle Reflectances

Forest-canopy height is an important parameter for the estimation of forest biomass and terrestrial carbon flux and climate-change research at regional and global scales. Currently, various methods combining Light Detection and Ranging (LiDAR) data with various auxiliary data, particularly satellite remotely sensed reflectances, have been widely used to produce spatially continuous canopy-height products. However, current methods in use for remote sensing reflectances mainly focus on the nadir view direction, while anisotropic reflectances, which are theoretically more sensitive to the forest canopy height in the multiangle remote sensing field, have rarely been explored. Here, we attempted to examine the potential of using modeled multiangle reflectances at three typical viewing angles (i.e., from the hotspot, darkspot, and nadir directions) to estimate forest-canopy height as auxiliary data sources. First, the sensitivities of the typical angular reflectances as a function of forest canopy height were fully examined using the Extended Fourier Amplitude Sensitivity Test (EFAST) method based on the 4-scale Bidirectional Reflectance Distribution Function (BRDF) model simulations. This indicated that reflectances in the off-nadir viewing directions are generally sensitive to canopy-height variations. Then, the canopy heights were extracted from airborne Laser Vegetation Imaging Sensor (LVIS) data, which were further divided into training and validation data. Moderate Resolution Imaging Spectroradiometer (MODIS) multiangle reflectances at typical viewing angles were calculated from the MODIS BRDF parameter product (MCD43A1, version 6) as partial training-input data, based on a hotspot-adjusted, kernel-driven linear BRDF model. Subsequently, the Random Forest (RF) machine learning model was trained to acquire the relationship between the extracted canopy heights and the corresponding MODIS typical viewing reflectances. The trained model was further applied to estimate the canopy height metrics in the study areas of Howland Forest, Harvard Forest, and Bartlett Forest. Finally, the estimated canopy heights were independently validated by canopy heights extracted from the LVIS data. The results indicate that the canopy heights modeled through this method exhibit generally high accordance with the LVIS-derived canopy heights (R = 0.65−0.67; RMSE = 3.63−5.78). The results suggest that the MODIS multiangle reflectance data at typical observation angles contain important information regarding forest canopy height and can, therefore, be used to estimate forest canopy height for various ecological applications.

Reproducibility, Precision, and Accuracy of a Hydroacoustic Method to Estimate Seagrass Canopy Height and Percent Cover in Massachusetts

Measured decreases in the spatial extent of seagrasses in Massachusetts are attributed to declining water quality, disease, or direct and indirect impact from dredging or construction. Routine aerial monitoring of seagrasses along the 2400-km coastline is costly and therefore limited both temporally and spatially. Diver surveys are used at two sites for in situ assessments of seagrass meadow structure. In order to examine spatial and temporal trends in seagrass extent and structure, a survey methodology that is less expensive and better at capturing structural characteristics than aerial photography and more efficient than divers is needed. Hydroacoustic methods are relatively inexpensive and rapidly deployed and can measure characteristics including canopy height and percent cover of eelgrass meadows. We tested the capabilities and limitations of a BioSonics DT-X echosounder using the EcoSAV algorithm to measure presence/absence, canopy height, and percent cover of eelgrass. Measurements were found to be reproducible on duplicate transects but had low precision: 36 cm for canopy height and 34% for percent cover. To assess accuracy, we compared EcoSAV estimates of canopy height and percent cover with diver measurements. The EcoSAV estimates of canopy height and percent cover were significantly higher than diver measurements by 60 cm and 46%. We conclude that the BioSonics with EcoSAV processing is an efficient tool to map eelgrass meadows and assess relative change over time, but because of differences in the way the echosounder measurements are made compared with diver measurements, echosounder data should not be used to directly compare with diver data or for surveys that require high accuracy and precision.

Canopy height measurements and non‐destructive biomass estimation of Lolium perenne swards using UAV imagery

AbstractIn perennial ryegrass breeding programmes, dry‐matter yield (DMY) of individual plots is monitored destructively at the different cuts or derived from non‐destructive canopy height measurements using devices like rising plate meters (RPM). These approaches both have constraints. Destructive sampling implies low temporal resolution, restraining the study of dry‐matter accumulation rates, while RPM measurements are influenced by the canopy structure and limit intra‐field variability identification. We present a phenotyping methodology, based on the use of an affordable RGB camera mounted on an unmanned aerial vehicle (UAV), to monitor the spatial and temporal evolution of canopy height and to estimate DMY. Weekly flights were carried out from April to October above a field comprising a diverse set of accessions. To test the capacity of UAV imagery to estimate canopy height, 8 ground control points and 28 artificial height references were placed at different locations. Accurate flights with an RMSE as low as 0.94 cm were achieved. In addition, canopy height was recorded using an RPM and destructive biomass samples were collected. Different models (linear, multiple linear, principal components, partial least squares regression and random forest) were used to predict DMY, and their performance was evaluated. The best estimations were obtained by combining variables including canopy height, vegetation indices and environmental data in a multiple linear regression (R2 = .81). All models built using UAV data obtained a lower RMSE than the one using RPM data. The approach presented is a possibility for breeders to incorporate new information in their selection process.

Comparison of Aboveground Biomass Estimation From InSAR and LiDAR Canopy Height Models in Tropical Forests

The potential of interferometric synthetic aperture radar (InSAR) heights from TanDEM-X for vegetation canopy height and aboveground biomass (AGB) estimation has long been recognized. Penetration of X-band into the canopy affects these estimations. Thus, the canopy height and AGB retrieval from InSAR are typically biased and cannot be compared directly to estimates from other data sources. The objective of this letter was to apply a penetration depth model to compensate for height biases in TanDEM-X InSAR heights. The resulting canopy height estimates are subsequently converted to AGB estimates using regression models. The uncorrected InSAR heights of the forest canopy are biased due to the penetration of the signal into the canopy and differ substantially to light detection and ranging (LiDAR) canopy height estimates. The application of the penetration depth compensation results in unbiased forest canopy height estimates and AGB regression models that are comparable between InSAR and LiDAR. These results indicate that TanDEM-X InSAR and LiDAR technologies can be used to estimate AGB in complex tropical forests suggesting a synergistic use of these fundamentally different observation concepts.

Canopy height estimation with TanDEM-X in temperate and boreal forests

Various semi-empirical models for linking PolInSAR data (polarimetric synthetic aperture radar interferometry) to canopy height of vegetation exist. However, only single-polarized data were used during the TanDEM-X mission in order to create a global digital elevation model (DEM). Therefore, simplifications of the semi-empirical models have to be applied to use the PolInSAR models for canopy height estimation with single-polarized TanDEM-X data. We extracted the volume coherence from TanDEM-X acquisitions and used a linear as well as a sinc model for the estimation of canopy height, which are based on the semi-empirical Random Volume over Ground model (RVoG). Both, the linear as well as the sinc model, were applied in temperate forests of Germany and boreal forests of Canada. The estimated canopy height was validated with LiDAR based canopy height models. In general, the sinc model resulted in higher coefficients of determination R2 from 0.08 to 0.64 and lower root mean squared errors (RMSE) between 4.8 m and 12.5 m compared to the linear model with R2 values between 0.08 and 0.62 (RMSE = 5.4 m to 13.5 m). Higher accuracies were generally achieved in winter and with higher height of ambiguity.

Estimating Biomass of Black Oat Using UAV-Based RGB Imaging

The spatial and temporal variability of crop parameters are fundamental in precision agriculture. Remote sensing of crop canopy can provide important indications on the growth variability and help understand the complex factors influencing crop yield. Plant biomass is considered an important parameter for crop management and yield estimation, especially for grassland and cover crops. A recent approach introduced to model crop biomass consists in the use of RGB (red, green, blue) stereo images acquired from unmanned aerial vehicles (UAV) coupled with photogrammetric softwares to predict biomass through plant height (PHT) information. In this study, we generated prediction models for fresh (FBM) and dry biomass (DBM) of black oat crop based on multi-temporal UAV RGB imaging. Flight missions were carried during the growing season to obtain crop surface models (CSMs), with an additional flight before sowing to generate a digital terrain model (DTM). During each mission, 30 plots with a size of 0.25 m² were distributed across the field to carry ground measurements of PHT and biomass. Furthermore, estimation models were established based on PHT derived from CSMs and field measurements, which were later used to build prediction maps of FBM and DBM. The study demonstrates that UAV RGB imaging can precisely estimate canopy height (R2 = 0.68–0.92, RMSE = 0.019–0.037 m) during the growing period. FBM and DBM models using PHT derived from UAV imaging yielded R2 values between 0.69 and 0.94 when analyzing each mission individually, with best results during the flowering stage (R2 = 0.92–0.94). Robust models using datasets from different growth stages were built and tested using cross-validation, resulting in R2 values of 0.52 for FBM and 0.84 for DBM. Prediction maps of FBM and DBM yield were obtained using calibrated models applied to CSMs, resulting in a feasible way to illustrate the spatial and temporal variability of biomass. Altogether the results of the study demonstrate that UAV RGB imaging can be a useful tool to predict and explore the spatial and temporal variability of black oat biomass, with potential use in precision farming.

Unmanned aerial vehicle (UAV) derived structure-from-motion photogrammetry point clouds for oil palm (Elaeis guineensis) canopy segmentation and height estimation

ABSTRACTThe vast size of oil palm (Elaeis guineensis) plantations has led to lightweight unmanned aerial vehicles (UAVs) being identified as cost effective tools to generate inventories for improved plantation management, with proximal aerial data capable of resolving single palm canopies at potentially, centimetric resolution. If acquired with sufficient overlap, aerial data from UAVs can be processed within structure-from-motion (SfM) photogrammetry workflows to yield volumetric point cloud representations of the scene. Point cloud-derived structural information on individual palms can benefit not only plantation management but is also of great environmental research interest, given the potential to deliver spatially contiguous quantifications of aboveground biomass, from which carbon can be accounted. Using lightweight UAVs we captured data over plantation plots of varying ages (2, 7 and 10 years) at peat soil sites in Sarawak, Malaysia, and we explored the impact of changing spatial resolution and image overlap on spatially variable uncertainties in SfM derived point clouds for the ten year old plot. Point cloud precisions were found to be in the decimetre range (mean of 26.7 cm) for a 10 year old plantation plot surveyed at 100 m flight altitude and >75% image overlap. Derived canopy height models were used and evaluated for automated palm identification using local height maxima. Metrics such as maximum canopy height and stem height, derived from segmented single palm point clouds were tested relative to ground validation data. Local maximum identification performed best for palms which were taller than surrounding undergrowth but whose fronds did not overlap significantly (98.2% mapping accuracy for 7 year old plot of 776 palms). Stem heights could be predicted from point cloud derived metrics with root-mean-square errors (RMSEs) of 0.27 m (R2 = 0.63) for 7 year old and 0.45 m (R2 = 0.69) for 10 year old palms. It was also found that an acquisition designed to yield the minimal required overlap between images (60%) performed almost as well as higher overlap acquisitions (>75%) for palm identification and basic height metrics which is promising for operational implementations seeking to maximise spatial coverage and minimise processing costs. We conclude that UAV-based SfM can provide reliable data not only for oil palm inventory generation but allows the retrieval of basic structural parameters which may enable per-palm above-ground biomass estimations.

High-resolution imagery acquired from an unmanned platform to estimate biophysical and geometrical parameters of olive trees under different irrigation regimes.

The experiments were conducted in a fully-productive olive orchard (cv. Frantoio) at the experimental farm of University of Pisa at Venturina (Italy) in 2015 to assess the ability of an unmanned aerial vehicle (UAV) equipped with RGB-NIR cameras to estimate leaf area index (LAI), tree height, canopy diameter and canopy volume of olive trees that were either irrigated or rainfed. Irrigated trees received water 4–5 days a week (1348 m3 ha-1), whereas the rainfed ones received a single irrigation of 19 m3 ha-1 to relieve the extreme stress. The flight altitude was 70 m above ground level (AGL), except for one flight (50 m AGL). The Normalized Difference Vegetation Index (NDVI) was calculated by means of the map algebra technique. Canopy volume, canopy height and diameter were obtained from the digital surface model (DSM) obtained through automatic aerial triangulation, bundle block adjustment and camera calibration methods. The NDVI estimated on the day of the year (DOY) 130 was linearly correlated with both LAI and leaf chlorophyll measured on the same date (R2 = 0.78 and 0.80, respectively). The correlation between the on ground measured canopy volumes and the ones by the UAV-RGB camera techniques yielded an R2 of 0.71–0.86. The monthly canopy volume increment estimated from UAV surveys between (DOY) 130 and 244 was highly correlated with the daily water stress integral of rainfed trees (R2 = 0.99). The effect of water stress on the seasonal pattern of canopy growth was detected by these techniques in correspondence of the maximum level of stress experienced by the rainfed trees. The highest level of accuracy (RMSE = 0.16 m) in canopy height estimation was obtained when the flight altitude was 50 m AGL, yielding an R2 value of 0.87 and an almost 1:1 ratio of measured versus estimated canopy height.

Improvement of forest canopy height estimation model by combining Geoscience Laser Altimetry System full waveform and multispectral remote sensing data over sloping terrain

Light detection and ranging (LiDAR) technology can provide accurate data for the vertical structure of a forest. Such data are fundamental for the study of aboveground biomass in the global carbon cycle. Most studies to date have used Geoscience Laser Altimetry System (GLAS) waveforms and terrain parameters as raw data in creating forest canopy height estimation models. Whether other parameters can be introduced to improve the accuracy of these models remain to be studied. In this study, we introduce parameters for forest texture to augment the topographic index model. Texture parameters were combined with field observations of canopy height to increase the accuracy of canopy height estimates over sloping terrain in the Lushuihe Forest District, a typical forest in the Changbai Mountains, Jilin Province, China. The study area consists mainly of broadleaf forest, coniferous forest, and mixed forest. Fifty-five sample plots covering different terrain reliefs and forest types were selected. The study areas were divided into high and low relief areas (i.e., hills and plains) using four different terrain relief thresholds (5, 10, 15, and 20 m) to select the best partition value. The results showed that the most accurate estimate of canopy height was given by the improved model using a 20-m threshold. Compared with the baseline topographic index model, R2 for leave-one-out cross-validation between the estimates given by the improved model and observed data increased from 0.777 to 0.952 and RMSE decreased from 2.90 to 1.35 m. The increased accuracy of canopy height estimates is due to the correction of GLAS waveform parameters by introducing texture parameters to incorporate changes in canopy structure because of forest aging and different forest types.

Canopy penetration depth estimation with TanDEM-X and its compensation in temperate forests

The potential of X-band interferometric synthetic aperture radar (InSAR) heights (e.g. from the TanDEM-X mission) for vegetation canopy height estimation has long been recognized. However, the penetration of the X-band into the canopy results in a height bias and substantially affects this estimation. The aim of the study was to apply a physical model to compensate the penetration depth (i.e. height bias) in canopy height estimation and evaluate its performance. We applied a penetration depth model on different TanDEM-X data in three German forests. This model is based on the volume coherence and imaging geometry of the InSAR acquisitions. We extracted the volume coherence from the TanDEM-X data and retrieved the height bias based on the penetration depth compared to actual surface heights. The modeled height bias was used to compensate the height bias in InSAR heights. The corrected TanDEM-X heights were evaluated with LiDAR data. In general, the penetration depth compensation in the InSAR heights improved the performance compared to the original InSAR heights resulting in elevations with a lower root mean squared error and the mean error decreased to less than 1 m with the LiDAR heights used as reference. This suggested that the height bias was accurately modeled for temperate forests, which can be of high relevance when InSAR heights are used for canopy height estimation or used in multi-temporal analysis such as forest growth, degradation and deforestation monitoring.