Objective To modify the Guy's stone score system and evaluate the validation of the modified score system in grading the complexity of percutaneous nephrolithotomy (PCNL) and predicting the stone-free rate after PCNL. Methods The modified system comprises 4 grades:grade Ⅰ,solitary stone in mid/lower pole or solitary stone in the pelvis with simple anatomy; grade Ⅱ,solitary stone in upper pole or multiple stones (located in 2 or more 2 calyces) in a patient with simple anatomy or a solitary stone in a patient with abnormal anatomy; grade Ⅲ,multiple stones in patients with abnormal anatomy or stones in a caliceal diverticulum or partial staghorn calculus; grade Ⅳ,staghorn calculus or any stone in a patient with spinal injury or spine malformation ( e.g.spina bifida,scoliosis,lordosis) ; kidney dysplasia ( e.g.duplex kidney,horseshoe kidney).It was validated on a database of 145 PCNL procedures performed by a single surgeon in a stone center.The clinical outcomes were retrospectively assessed with multivariate analysis.Results Of the 145 PCNL patients,according to Guy's stone score system and the modified score system,there were 22 G1 cases (15.2%) and 22 SFR cases (100.0%) ; 27 G2 cases (18.6%) and 25 SFR cases (92.6%); 36 G3 cases (24.8%) and SFR(31,86.1%); 60 G4 cases (41.4%) and 49 SFR cases ( 81.7% ).Showing that the modified Guy's stone score was more accurate in predicting stone-free rate after PCNL ( P < 0.05 ). Conclusions The modified Guy' s stone score system can accurately predict the stone-free rate after PCNL than the old system. Key words: Percutaneous nephrolithotomy; Kidney calculi; Surgical management; Guy's stone seore system