Brassica Rapa Research Articles

Investigating the effects of tauroursodeoxycholic acid (TUDCA) in mitigating endoplasmic reticulum stress and cellular responses in Pak choi.

The accumulation of misfolded proteins in the endoplasmic reticulum (ER) within plant cells due to unfavourable conditions leads to ER stress. This activates interconnected pathways involving reactive oxygen species (ROS) and unfolded protein response (UPR), which play vital roles in regulating ER stress. The aim of this study is to investigate the underlying mechanisms of tunicamycin (TM) induced ER stress and explore the potential therapeutic applications of tauroursodeoxycholic acid (TUDCA) in mitigating cellular responses to ER stress in Pak choi (Brassica campestris subsp. chinensis). The study revealed that ER stress in Pak choi leads to detrimental effects on plant morphology, ROS levels, cellular membrane integrity, and the antioxidant defence system. However, treatment with TUDCA in TM-induced ER stressed Pak choi improved morphological indices, pigment contents, ROS accumulation, cellular membrane integrity, and antioxidant defence system restoration. Additionally, TUDCA also modulates the transcription levels of ER stress sensors genes, ER chaperone genes, and ER-associated degradation (ERAD) genes during ER stress in Pak choi. Furthermore, TUDCA has demonstrated its ability to alleviate ER stress, stabilize the UPR, reduce oxidative stress, prevent apoptosis, and positively influence plant growth and development. These results collectively comprehend TUDCA as a promising agent for mitigating ER stress-induced damage in Pak choi plants and provide valuable insights for further research and potential applications in crop protection and stress management.

Spring applied phosphorus loss with cover crops in no-till terraced field

Cover crops (CC) can improve phosphorus (P) cycling by reducing water related P losses and contributing to P nutrition of a rotational crop. This is particularly important in claypan soils with freeze-thaw cycles in early spring in the Midwest U.S. This 4-year study (2019–2022) examined the impact of CC monoculture and mix of CC species on P losses from a fertilizer application, and determined the P balance in soil compared to no cover crop (noCC). The CC mix consisted of wheat (Triticum aestivum L.), radish (Raphanus raphanistrum subsp. Sativus), and turnip (Brassica rapa subsp. Rapa) (3xCCmix) in 2019 and 2021 before corn, and cereal rye (Secale cereale L.) was planted as monoculture before soybean in 2020 and 2022. The 3xCCmix had no effect on total phosphorus (TP) and dissolved reactive phosphorus (PO4–P) concentration or load in 2019 and 2021. Cereal rye reduced TP and PO4–P load 70% and 73%, respectively, compared to noCC. The variation in soil moisture, temperature, and net precipitation from fertilizer application until CC termination affected available soil P pools due to variability in CC species P uptake, residue decomposition, and P loss in surface water runoff. Overall, the P budget calculations showed cereal rye had 2.4 kg ha−1 greater P uptake compared to the 3xCCmix species which also reduced P loss in water and had greater differences in soil P status compared to noCC. This study highlights the benefit of CCs in reducing P loss in surface runoff and immobilizing P through plant uptake. However, these effects were minimal with 3xCCmix species and variability in crop residue decomposition from different CC species could affect overall P-soil balance.

Far-red Light and Nitrogen Concentration Elicit Crop-specific Responses in Baby Greens under Superelevated CO2 and Continuous Light

Baby greens are becoming increasingly popular in the consumer market because of their desired flavor and leaf size. The short life cycles and fast response times to environmental stimuli make baby greens ideal for testing environmental conditions for space crop production. Additionally, far-red (FR) light has been used for microgreen and baby green research to enhance stem elongation, leaf expansion, and biomass; however, how it interacts with nutrient solution nitrogen (N) concentrations remains unclear. During this ground-based study, we characterized how FR light and N concentrations influenced the growth and morphology of Chinese cabbage (Brassica rapa var. chinensis cv. Tokyo Bekana) and kale (Brassica oleracea var. sabellica cv. Red Russian) baby greens under similar superelevated CO2 and low relative humidity to levels observed in spaceflight. Plants were subject to combinations of four sole-source light spectra and three N concentrations (75, 125, and 175 mg⋅L−1). At the same total photon flux density (PFD) of 200 μmol⋅m−2⋅s−1, we maintained the same blue and green PFDs at 25 μmol⋅m−2⋅s−1 each; the remaining 150 μmol⋅m−2⋅s−1 comprised four red (R) and FR PFD combinations (FR: 0, 25, 50, and 75 μmol⋅m−2⋅s−1). Increasing the FR PFD enhanced the typical shade-avoidance morphology of Chinese cabbage ‘Tokyo Bekana’ and kale ‘Red Russian’, exhibiting leaf length increases of 20% to 26% and 31% to 61%, respectively. Edible biomass did not increase with increasing FR PFDs for either species, regardless of the N concentration. Increasing the N concentration increased the Chinese cabbage ‘Tokyo Bekana’ fresh mass and dry mass by 32% to 59% and 37% to 74%, respectively, except under 25 μmol⋅m−2⋅s−1 of FR light, with which shoot fresh mass increased by 55% with an increasing N concentration from 75 to 125 mg⋅L−1; however, the shoot dry mass was unaffected. Increasing the N concentration did not affect kale ‘Red Russian’ growth under various FR PFDs. We conclude that partially substituting incremental FR light for R light elicits the shade-avoidance response, with little influence on the growth, of Chinese cabbage ‘Tokyo Bekana’ and kale ‘Red Russian’ baby greens under superelevated CO2 and continuous light, and that the former, but not the latter, crop can benefit from increased N fertilization.

The Combination of Pakcoy Juice (Brassica Rapa L.) and Antihypertensive Medication in Reducing Blood Pressure in Pregnant Women with Hypertension

Hypertension in pregnant women ranks as the second highest cause of Chronic Kidney Disease (CKD). Hypertension is defined as a minimum diastolic blood pressure of 90 mmHg and a minimum systolic blood pressure of 140 mmHg, with an increase in diastolic and systolic pressure of at least 15 mmHg and 30 mmHg, respectively. This study aims to evaluate the impact of a combination of Pakcoy juice (Brassica rapa L) and antihypertensive medication on blood pressure in pregnant women with hypertension.Using a quasi-experimental design with a One Group Pre-Test – Post-Test without a control group, the study involved 14 pregnant women with hypertension at the Gunung Sugih Community Health Center from January to June 2023 as the population. The results of data analysis indicate a significant influence (p value 0.000 < α: 0.05) on the reduction of blood pressure after the administration of antihypertensive medication and Pakcoy juice.The discussion emphasizes that Pakcoy juice is effective as a supplement to antihypertensive medication due to its natural content of potassium, calcium, and magnesium, which can reduce blood pressure. Consuming 4,700 milligrams of potassium per day is known to lower blood pressure caused by high sodium intake. In conclusion, the combination of Pakcoy juice and antihypertensive medication has a positive effect of 19% on reducing blood pressure in pregnant women with hypertension at the Gunung Sugih Community Health Center, with a recommendation for health education outreach to prevent hypertension cases in pregnant women.

Eco-Geographical and Botanical Patterns of Resistance to Lepidoptera Insects in Brassica rapa L.

In the context of the widespread expansion of damage by herbivorous pests of Brassica crops, taking into account the requirements for minimizing pesticide pollution of the environment, it is important to have fundamental knowledge of the geographical features of the distribution of pests and about the botanical confinement of plant resistance in order to develop a strategy for creating new Brassica cultivars with complex resistance to insects. The relevance of our work is related to the study of the variability in the degree of resistance of the extensive genetic diversity of Brassica rapa accessions to the main herbivorous pests of Brassica crops in contrasting ecological and geographical zones of the Russian Federation (Arctic, northwestern, and southern zones). We have studied the distribution and food preferences of Lepidoptera insects (diamondback moth Plutella xylostella and cabbage moth Mamestra brassicae) on a set of 100 accessions from the VIR B. rapa collection (Chinese cabbage, pakchoi, wutacai, zicaitai, mizuna, and leaf and root turnips) in the field in three zones of the Russian Federation. We have found that the diamondback moth and cabbage moth are largely harmful in three zones of the European part of the Russian Federation, although the degree of damage to plants by these insects varies by year of cultivation. On average, for the set studied during the two years of the experiment, the degree of plant damage by both pests in the Arctic zone was low and almost low, and in the northwestern and southern zones, it was medium. It was noted that diamondback moth damage was greater in the northwestern zone in both years and in the southern and Arctic zones in 2021, while in 2022, the degree of cabbage moth damage was slightly higher in the southern and Arctic zones. Under the conditions of field diamondback moth damage, the accessions of Chinese cabbage, wutacai, and mizuna turned out to be the most resistant (the damage score was 1.92-1.99), whereas the accessions of wutacai and pakchoi were the most resistant to the cabbage moth (the damage score was 1.62-1.78). A high variability in the degree of resistance of Brassica crops to Lepidoptera insects from complete resistance to susceptibility was revealed. We have identified sources of resistance to insects, including complex resistance in all study areas, among landraces and some modern cultivars of Chinese cabbage, pakchoi, wutacai, and mizuna from Japan and China, as well as European turnips. The highest susceptibility to pests in the studied set was noted in the accession of root turnip "Hinona" (k-1422, USA) (average damage score of 3.24-3.53 points). We were not able to establish the morphological features of resistant plants or the geographical confinement of the origin of resistance of B. rapa crop accessions.

Bioponic systems with biochar: Insights into nutrient recovery, heavy metal reduction, and microbial interactions in digestate-based bioponics

Bioponics is a nutrient-recovery technology that transforms nutrient-rich organic waste into plant biomass/bioproducts. Integrating biochar with digestate from anaerobic wastewater treatment process can improve resource recovery while mitigating heavy metal contamination. The overarching goal of this study was to investigate the application of biochar in digestate-based bioponics, focusing on its efficacy in nutrient recovery and heavy metal removal, while also exploring the microbial community dynamics. In this study, biochar was applied at 50 % w/w with 500 g dry weight of digestate during two 28-day crop cycles (uncontrolled pH and pH 5.5) using white stem pak choi (Brassica rapa var. chinensis) as a model crop. The results showed that the digestate provided sufficient phosphorus and nitrogen, supporting plant growth. Biochar amendment improved plant yield and phosphate solubilization and reduced nitrogen loss, especially at the pH 5.5. Furthermore, biochar reduced the heavy metal accumulation in plants, while concentrating these metals in the residual sludge. However, owing to potential non-carcinogenic and carcinogenic health risks, it is still not recommended to directly consume plants cultivated in digestate-based bioponic systems. Additionally, biochar amendment exhibited pronounced impact on the microbial community, promoting microbes responsible for nutrient solubilization and cycling (e.g., Tetrasphaera, Herpetosiphon, Hyphomicrobium, and Pseudorhodoplanes) and heavy metal stabilization (e.g., Leptolinea, Fonticella, Romboutsia, and Desulfurispora) in both the residual sludge and plants. Overall, the addition of biochar enhanced the microbial community and facilitated the metal stabilization and the cycling of nutrients within both residual sludge and root systems, thereby improving the overall efficiency of the bioponics.

Integrating Dynamic 3D Chromatin Architecture and Gene Expression Alterations Reveal Heterosis in Brassica rapa.

Heterosis plays a significant role in enhancing variety, boosting yield, and raising economic value in crops, but the molecular mechanism is still unclear. We analyzed the transcriptomes and 3D genomes of a hybrid (F1) and its parents (w30 and 082). The analysis of the expression revealed a total of 485 specially expressed genes (SEGs), 173 differentially expressed genes (DEGs) above the parental expression level, more actively expressed genes, and up-regulated DEGs in the F1. Further study revealed that the DEGs detected in the F1 and its parents were mainly involved in the response to auxin, plant hormone signal transduction, DNA metabolic process, purine metabolism, starch, and sucrose metabolism, which suggested that these biological processes may play a crucial role in the heterosis of Brassica rapa. The analysis of 3D genome data revealed that hybrid F1 plants tend to contain more transcriptionally active A chromatin compartments after hybridization. Supplementaryly, the F1 had a smaller TAD (topologically associated domain) genome length, but the number was the highest, and the expression change in activated TAD was higher than that of repressed TAD. More specific TAD boundaries were detected between the parents and F1. Subsequently, 140 DEGs with genomic structural variants were selected as potential candidate genes. We found two DEGs with consistent expression changes in A/B compartments and TADs. Our findings suggested that genomic structural variants, such as TADs and A/B chromatin compartments, may affect gene expression and contribute to heterosis in Brassica rapa. This study provides further insight into the molecular mechanism of heterosis in Brassica rapa.

Identification of Clubroot (Plasmodiophora brassicae) Resistance Loci in Chinese Cabbage (Brassica rapa ssp. pekinensis) with Recessive Character.

The soil-borne pathogen Plasmodiophora brassicae is the causal agent of clubroot, a major disease in Chinese cabbage (Brassica rapa ssp. pekinensis). The host's resistance genes often confer immunity to only specific pathotypes and may be rapidly overcome. Identification of novel clubroot resistance (CR) from germplasm sources is necessary. In this study, Bap246 was tested by being crossed with different highly susceptible B. rapa materials and showed recessive resistance to clubroot. An F2 population derived from Bap246 × Bac1344 was used to locate the resistance Quantitative Trait Loci (QTL) by Bulk Segregant Analysis Sequencing (BSA-Seq) and QTL mapping methods. Two QTL on chromosomes A01 (4.67-6.06 Mb) and A08 (10.42-11.43 Mb) were found and named Cr4Ba1.1 and Cr4Ba8.1, respectively. Fifteen and eleven SNP/InDel markers were used to narrow the target regions in the larger F2 population to 4.67-5.17 Mb (A01) and 10.70-10.84 Mb (A08), with 85 and 19 candidate genes, respectively. The phenotypic variation explained (PVE) of the two QTL were 30.97% and 8.65%, respectively. Combined with gene annotation, mutation site analysis, and real-time quantitative polymerase chain reaction (qRT-PCR) analysis, one candidate gene in A08 was identified, namely Bra020861. And an insertion and deletion (InDel) marker (co-segregated) named Crr1-196 was developed based on the gene sequence. Bra013275, Bra013299, Bra013336, Bra013339, Bra013341, and Bra013357 in A01 were the candidate genes that may confer clubroot resistance in Chinese cabbage. The resistance resource and the developed marker will be helpful in Brassica breeding programs.

Effects of Biochar-Coated Nitrogen Fertilizer on the Yield and Quality of Bok Choy and on Soil Nutrients

This study was aimed at problems associated with low fertilizer using efficiency, excessive nitrate content of vegetables, and soil degradation in greenhouse vegetable production. A pot experiment was conducted to assess the effects of applying biochar-coated nitrogen fertilizer (BCNF) on the yield, quality, and nitrate content of bok choy (Brassica rapa subsp. Chinensis) as well as on soil nutrients in greenhouses. Four treatments were set up as follows: no nitrogen fertilizer application (BA), chemical nitrogen fertilizer application (CK), biochar-coated nitrogen fertilizer application (BCNF, the amount of nitrogen was equal to that of chemical fertilizer), and reduced biochar-coated nitrogen fertilizer application (D-BCNF, the amount of fertilizer was 80% of BCNF). Compared with the other treatments, BCNF treatment increased chlorophyll content, plant height, maximum leaf length, maximum leaf width, and other biological characters of bok choy. Compared with CK treatment, BCNF treatment increased the fresh weight of bok choy by 14.02%, while reducing the root–shoot ratio and nitrate content by 19.1% and 46%, respectively. It was further found that the application of BCNF could effectively increase the content of soil organic matter; reduce the leaching loss of nitrate nitrogen, exchangeable calcium and magnesium; and effectively improve nitrogen use efficiency. Therefore, the application of BCNF can not only reduce the loss of fertilizer nutrients, promote plant growth, and improve fertilizer utilization, but it can also improve soil nutrients, fix carbon, and reduce emissions. It is a new type of environmental protection fertilizer with application prospects.

Analogous Charging Effect of Surfactant-Pesticide Spray Jet on Droplet Characteristics and Deposition on Hydrophobic Leaf Surfaces

An induction charging principle had been applied to enhance spray droplet characteristics and quantity deposition on hydrophobic abaxial-adaxial leaf surfaces from pesticide EC Glyphosate [C3H8NO5P] and surfactant Silwet L-77 [C13H34O4Si3] formulations. A nozzle cap containing two electrodes (spacing at 9 mm apart) was used to superpose charges to spray droplets under applied voltages of 2–12 kV in an electric field (E) of 8.9 × 105 V/m. From a tee-jet flat fan (TP11004VS) nozzle tip fitted into the electrode cap and positioned at 60 cm high above targeted Brassica campestris leave surfaces, the spray droplets were directed onto the leaves at a liquid flow pressure of 4 bar and travelling speed of 2 m/s. The measurements were done using Keithsley picoammeter to quantify spray chargeability (CMR), droplet sizes by lesser particle size analyzer (LPSA) and deposition on leaf surfaces by high-speed camera. In effect, droplet sizes of EC, L-77 and EC + L-77 decreased with an increasing applied voltage. The CMR of L-77 was lower than EC and highest for EC + L-77 composite solution. Based on Image analysis of droplets density per leaf area, maximum exposure of adaxial leaf surfaces intercepted many charged spray droplets than abaxial surfaces. As regressed, the quantity of charged spray deposition from EC + L-77 formulation was highest at both adaxial (approx. 27.44 Qd/cm2) and abaxial (approx. 5.57 Qd/cm2) hydrophobic leaf surfaces than EC of 26.12: 3.19 Qd/cm2 and L-77 of 24.80: 2.53 Qd/cm2, respectively. Also, contact angle, Theta E, of charged spray droplets was smaller than Theta C on adaxial than abaxial leave surfaces, a phenomenon attributed to high chemo-electrical properties of formulations that aided the direct flight, coiling and deposition of droplets in order of EC > EC + L-77 > L-77. Generally, there was no observable droplet rebound; hence, surfactant-pesticide composite spraying is considered suitable for electrostatic application in plant protection technology. Therefore, for effective application, charged droplets from glyphosate EC in silwet L-77 solution should be recommended, as it provides optimum droplet sizes, chargeability, contact angle and deposition on hydrophobic leave surfaces.

All-organic transparent plant e-skin for noninvasive phenotyping.

Real-time in situ monitoring of plant physiology is essential for establishing a phenotyping platform for precision agriculture. A key enabler for this monitoring is a device that can be noninvasively attached to plants and transduce their physiological status into digital data. Here, we report an all-organic transparent plant e-skin by micropatterning poly(3,4-ethylenedioxythiophene) polystyrene sulfonate (PEDOT:PSS) on polydimethylsiloxane (PDMS) substrate. This plant e-skin is optically and mechanically invisible to plants with no observable adverse effects to plant health. We demonstrate the capabilities of our plant e-skins as strain and temperature sensors, with the application to Brassica rapa leaves for collecting corresponding parameters under normal and abiotic stress conditions. Strains imposed on the leaf surface during growth as well as diurnal fluctuation of surface temperature were captured. We further present a digital-twin interface to visualize real-time plant surface environment, providing an intuitive and vivid platform for plant phenotyping.

Stenotrophomonas strain CD2 reduces cadmium accumulation in Brassica rapa L.

IntroductionCadmium (Cd) is a highly toxic heavy metal which contaminates agricultural soils and is easily absorbed by plants. Brassica rapa L. is one of the most popular vegetables in China and is known to accumulate Cd in its roots and aerial tissues.MethodsA highly Cd-resistant bacterium (‘CD2’) was isolated and identified. Its ability to immobilize Cd(II) in medium was studied. Strain CD2 were added into Cd-polluted soil to ameliorate Cd accumulation in B. rapa. The underlying mechanisms of ‘CD2’ to reduce Cd accumulation in B. rapa. were analyzed by transcriptomics.Results and discussionStrain CD2 was classified as belonging to the genus Stenotrophomonas. Strain CD2 was found to be able to remove 0.1 mmol/L Cd(II) after 36 h by intracellular sequestration and by producing biofilm, exopolysaccharide, and H2S. When applied to Cd-contaminated soil, ‘CD2’ significantly increased the content of nonbioavailable Cd by 212.70%. Furthermore, ‘CD2’-inoculated B. rapa exhibited a 51.16% decrease in the Cd content of roots and a 55.56% decrease in the Cd content of aerial tissues. Transcriptome analysis identified 424 differentially expressed genes (DEGs) in the roots and 501 DEGs in the aerial tissues of uninoculated Cd-exposed plants. By comparison, 1107 DEGs were identified in the roots and 1721 DEGs were identified in the aerial tissues of ‘CD2’-inoculated Cd-exposed plants. In both treatment groups, genes related to vacuolar sequestration were upregulated, resulting in inhibited Cd transport. In addition, both catalase and glutathione transferase were induced in uninoculated plants, while the oxidative stress-related genes CPK and RBOH belonged to ‘plant-pathogen interactions’ were upregulated in ‘CD2’-inoculated plants. Moreover, inoculation with ‘CD2’ resulted in the enrichment of phenylpropane metabolism; cutin, suberine, and wax biosynthesis; and the AP2, Dof, WOX, Trihelix, B3, EIL, and M-type_MADS transcription factors; as well as the downregulation of zinc transporters and blue copper proteins. All of these changes likely contributed to the reduced Cd accumulation in ‘CD2’-inoculated B. rapa. The results of this study suggest that Stenotrophomonas sp. CD2 may prove to be a useful inoculant to prevent Cd accumulation in B. rapa.

The Effect of Mol of Rice Water Waste and Kepok Banana Peel to The Growth of Brassica rapa chinensis

MOL merupakan larutan fermentasi oleh mikroba dan bersumber dari bahan organik seperti kulit pisang. MOL berguna dalam mendorong penguraian bahan organik dan dapat digunakan sebagai pupuk organik cair karena mengandung NPK. Penelitian ini bertujuan untuk pengaruh fermentasi campuran air cucian beras putih dan kulit pisang kepok terhadap pertumbuhan tanaman pakcoy (Brassica rapa chinensis) dan untuk mengetahui konsentrasi terbaik MOL dari kulit pisang kepok yang diberikan. Penelitian ini menggunakan Rancangan Acak Lengkap (RAL) dengan 5 perlakuan dan 5 ulangan. Perlakuan pada penelitian ini adalah P0 (kontrol), P1 (10%), P2 (20%), P3 (30%), dan P4 (40%). Data dianalisis menggunakan analisis varians (ANOVA) yang dilanjutkan dengan Uji Duncan pada taraf signifikansi 5%. Hasil penelitian menunjukkan bahwa MOL kulit pisang kepok berpengaruh terhadap pertumbuhan tanaman pakcoy pada beberapa parameter yaitu berat basah, berat kering dan panjang akar tanaman namun tidak terhadap tinggi dan jumlah daun tanaman pakcoy. Perlakuan P2 (20%) menunjukkan hasil terbaik.

Metabolism and transcriptional analyses reveal the mechanism of sucrose affecting the floral transition in pak choi (Brassica rapa ssp. chinensis Makino)

The yield and quality of pak choi decrease due to premature bolting in production. The floral transition is an important turning point before bolting in plants. In this study, the sugar content was measured, and it was found that sucrose, glucose and fructose increased significantly in shoot apices but decreased significantly in leaves during the floral transition of pak choi. Exogenous sucrose had a significant effect on the floral transition and bolting than glucose, making the bolting time 14.80 days earlier and the bolting rate reaching 100 %. Determination of the activities of sucrose phosphate synthase, sucrose synthase, and sucrose invertase showed that all enzyme activities increased during the floral transition, but the increase in anabolism was than that in catabolism, indicating that the process of sucrose synthesis was significantly enhanced during the floral transition. Analyzing the transcriptome in shoot apices at different floral stages revealed that the expression of most genes encoding enzymes was consistent with enzyme activities. To analyze the presumable molecular network in which sucrose affects the floral transition, a total of 5376 differentially expressed genes were identified during the floral transition. Trend analysis revealed that profiles 0 and 7 were significantly enriched in sucrose metabolism. In addition, they were also significantly enriched in floral development, circadian rhythm and photoperiod, and plant hormone signal transduction, which suggests that sucrose may contribute to the floral transition by regulating these pathways. These results provide an important reference value for further study on the mechanism by which sugar regulates the floral transition and provide specific data for the in-depth identification of key sucrose-related genes affecting the floral transition of pak choi.

Allelopathic Potential and Chemical Composition of Essential Oil from the Invasive Plant Acmella radicans

Acmella radicans (Jacquin) R.K. Jansen is a new invasive species recorded in Yunnan Province, China, and little is known about its allelopathic potential and allelochemicals. In this study, the allelopathic effects of the essential oil (EO) of A. radicans on seed germination and seedling growth of four common plants, Brassica napus, Brassica rapa ssp. chinensis, Digitaria sanguinalis, and Lolium multiflorum, were explored. The results showed that the seed germination index, germination rate, root length, stem length, and biomass of B. napus and B. rapa ssp. chinensis were significantly inhibited at all EO concentrations of A. radicans, but there was a ‘low-promotion and high-inhibition effect’ on the root length of D. sanguinalis and L. multiflorum at low concentrations of 0.5 μL·mL−1 and 0.5–1.0 μL·mL−1, respectively. With increasing concentrations of EO, the inhibition rates of seed germination and seedling growth of four common plants gradually increased, and D. sanguinalis and L. multiflorum were the most inhibited, followed by B. rapa ssp. chinensis, and the least inhibited was B. napus. Thirty-two components were identified using GC–MS, representing 99.07% of the EO in A. radicans. The major components were 2-tridecanone (30.46%), caryophyllene oxide (19.18%), 4,8,11,11-tetramethylbicyclo[7.2.0]undec-3-en-5-ol (7.84%), β-caryophyllene (7.67%), and widdrol (4.7%). Among the compounds we identified, (E,E)-2,4-decadienal, 2-tridecanone, γ-cadinene, δ-cadinene, (E)-α-cadinol, spathulenol, caryophyllene oxide, and widdrol have been previously reported as having possible allelopathic effects. Our study was the first to show that A. radicans could potentially release allelochemicals to influence neighboring plants during its invasion and expansion.

Bioinformatic Analysis of Codon Usage Bias of HSP20 Genes in Four Cruciferous Species.

Heat shock protein 20 (HSP20) serves as a chaperone and plays roles in numerous biological processes, but the codon usage bias (CUB) of its genes has remained unexplored. This study identified 140 HSP20 genes from four cruciferous species, Arabidopsis thaliana, Brassica napus, Brassica rapa, and Camelina sativa, that were identified from the Ensembl plants database, and we subsequently investigated their CUB. As a result, the base composition analysis revealed that the overall GC content of HSP20 genes was below 50%. The overall GC content significantly correlated with the constituents at three codon positions, implying that both mutation pressure and natural selection might contribute to the CUB. The relatively high ENc values suggested that the CUB of the HSP20 genes in four cruciferous species was relatively weak. Subsequently, ENc exhibited a negative correlation with gene expression levels. Analyses, including ENc-plot analysis, neutral analysis, and PR2 bias, revealed that natural selection mainly shaped the CUB patterns of HSP20 genes in these species. In addition, a total of 12 optimal codons (ΔRSCU > 0.08 and RSCU > 1) were identified across the four species. A neighbor-joining phylogenetic analysis based on coding sequences (CDS) showed that the 140 HSP20 genes were strictly and distinctly clustered into 12 subfamilies. Principal component analysis and cluster analysis based on relative synonymous codon usage (RSCU) values supported the fact that the CUB pattern was consistent with the genetic relationship at the gene level and (or) species levels. These results will not only enrich the HSP20 gene resource but also advance our understanding of the CUB of HSP20 genes, which may underlie the theoretical basis for exploration of their genetic and evolutionary pattern.

Enhancing the carbon content of coal gangue for composting through sludge amendment: A feasibility study

Cocomposting coal gangue and sludge eliminates the challenge of utilizing coal gangue. However, there is limited understanding about the feasibility of cocomposting sludge and coal gangue, as well as the composting indicators, functional microorganisms, and safety risks involved. Therefore, this study evaluated the feasibility of enhancing carbon composting in coal gangue by incorporating sludge along with sawdust as a conditioner. Three laboratory-scale reactors were designed and labeled as T1 (20 % coal gangue, 60 % sludge, and 20 % sawdust), T2 (40 % coal gangue, 40 % sludge, and 20 % sawdust), and T3 (60 % coal gangue, 20 % sludge, and 20 % sawdust). Seed germination and plant growth assessments were conducted to ensure compost stability and assess phytotoxicity to cabbage (Brassica rapa chinensis L.) in terms of growth and biomass. The results indicated that the temperature, pH, EC and ammonia nitrogen of all three reactor conditions met the requirements for product decomposition. Composting was successfully achieved when the sludge proportion was 20 % (T3). However, when the sludge proportion was markedly high (T1), the harmlessness of the compost was reduced. The germination indices of T1, T2, and T3 reached 95 %, 122 %, and 119 % at maturity, respectively. This confirmed that the harmless cycle, which involved promoting condensation and aromatization, enhancing decay, and reducing composting time, was shorter in T2 and T3 than in T1. Coal gangue can also serve as a beneficial habitat for microorganisms, promoting an increase in their population and activity. Potting experiments in sandy soil revealed that the mechanism of action of compost products in soil included not only the enhancement of soil nutrients but also the improvement of soil texture. The results of this study suggest that using coal gangue as a raw material for composting is an efficient and environmentally friendly approach for producing organic fertilizers.

Influence of Dietary Fibre and Protein Fractions on the Trace Element Bioaccessibility of Turnip Tops (Brassica rapa) Growing under Mediterranean Conditions

The objective of this work was to study the influence of three dietary fibre fractions (pectin, gum arabic and cellulose) and three protein fractions (casein, lactalbumin and soy) on the trace element bioaccessibility (Fe, Mn, Ni, Se and Zn) of turnip tops (B. rapa subsp. Rapa) growing under Mediterranean conditions. Then, it aimed to promote the use of this vegetable not only for direct fresh consumption but also as a main ingredient in the development of food mixtures. The results showed that soluble fibre fractions, such as pectin and gum arabic, can enhance the bioaccessibility of trace elements, such as Fe, Mn, Se and Zn. This effect was not proved for cellulose (an insoluble fibre fraction), in which, at best, no bioaccessibility effect was observed. Regarding the protein fractions, with the exception of Se, caseins and lactalbumin had a neutral effect on improving the trace element bioaccessibility. This did not hold true for soy protein, in which a considerable improvement in the bioaccessibility of Fe, Mn, Se and Zn was determined.

R2R3-MYB repressor, BrMYB32, regulates anthocyanin biosynthesis in Chinese cabbage.

Anthocyanin-enriched Chinese cabbage has health-enhancing antioxidant properties. Although various regulators of anthocyanin biosynthesis have been identified, the role of individual repressors in this process remains underexplored. This study identifies and characterizes the R2R3-MYB BrMYB32 in Chinese cabbage (Brassica rapa), which acts as a repressor in anthocyanin biosynthesis. BrMYB32 expression is significantly upregulated under anthocyanin inductive conditions, such as sucrose and high light treatment. Transgenic tobacco plants overexpressing BrMYB32 show decreased anthocyanin levels and downregulation of anthocyanin biosynthesis genes in flowers, highlighting BrMYB32's repressive role. Located in the nucleus, BrMYB32 interacts with the TRANSPARENT TESTA 8 (BrTT8), a basic helix-loop-helix protein, but no interaction was detected with the R2R3-MYB protein PRODUCTION OF ANTHOCYANIN PIGMENT 1 (BrPAP1). Functional assays in Chinese cabbage cotyledons and tobacco leaves demonstrate that BrMYB32 represses the transcript level of anthocyanin biosynthesis genes, thereby inhibiting pigment accumulation. Promoter activation assays further reveal that BrMYB32 inhibits the transactivation of CHALCONE SYNTHASE and DIHYDROFLAVONOL REDUCTASE through the C1 and C2 motifs. Notably, BrMYB32 expression is induced by BrPAP1, either alone or in co-expression with BrTT8, and subsequently regulates the expression of these activators. It verifies that BrMYB32 not only interferes with the formation of an active MYB-bHLH-WD40 complex but also downregulates the transcript levels of anthocyanin biosynthesis genes, thereby fine-tuning anthocyanin biosynthesis. Our findings suggest a model in which anthocyanin biosynthesis in Chinese cabbage is precisely regulated by the interplay between activators and repressors.

Growth and yield of pakcoy (Brassica rapa L.) due to different concentration of AB Mix nutrient and foliar fertilizer in the floating hydroponic system

Nutrient solution is one of the most essential factors in influencing the production, yield and quality of plants hydroponically. This study aimed to obtain the best concentration of AB Mix nutrients and foliar fertilizer, as well as their combination on the growth and yield of pakcoy in the Floating Hydroponic System. This research was carried out at the Experimental Garden of the Faculty of Agriculture, Universitas Syiah Kuala, Banda Aceh from February to March 2023. This study used a 3 x 3 factorial RCBD with two factors. The first factor was the AB Mix concentration (800, 1000, and 1200 ppm), and the second factor was foliar fertilizer concentration (0, 250 and 500 ppm). The AB Mix concentration had a very significant effect on the total and consumption part wet weight, and also it had a significant effect on the number, length and width of leaf at 4 WAP. The foliar fertilizer concentration had a very significant effect on total and consumption part wet weight, had a significant effect on plant height at 4 WAP. The best growth and yield of pakcoy plants was obtained with the combination of 1200 ppm AB Mix nutrient concentrations and 250 ppm foliar fertilizer concentration.