Aircraft engines will face corrosion and erosion problems when working in harsh gas path environments for a long time, and the fault parameter characteristics are not obvious. Therefore, accurate aircraft engine fault diagnosis methods are of great significance to ensure the safe operation of aircraft. In order to improve the prediction accuracy, an aircraft engine fault diagnosis method based on fused convolutional Transformer is proposed. The self-attention mechanism is used to extract useful features and suppress redundant information. The maximum pooling layer (MaxPool) is introduced into the Transformer model to further reduce the model memory consumption and parameter quantity, and alleviate the overfitting phenomenon. The simulation data set of turbofan engines based on GasTurb modeling is used for verification. The results show that compared with the Transformer network and other traditional deep learning models Back Propagation Neural Networks (BP network), Convolutional Neural Networks (CNN) and Recurrent Neural Network (RNN), the accuracy rates are improved by 6.552%、28.117%、13.189%and respectively 10.29%, which proves the effectiveness of the proposed method and can provide a certain reference for aircraft engine fault diagnosis.