Risk Of Bovine Respiratory Disease Research Articles

Variation in Pen-Level Prevalence of BRD Bacterial Pathogens and Antimicrobial Resistance Following Feedlot Arrival in Beef Calves.

Antimicrobials are crucial for treating bovine respiratory disease (BRD) in beef feedlots. Evidence is needed to support antimicrobial use (AMU) decisions, particularly in the early part of the feeding period when BRD risk is highest. The study objective was to describe changes in prevalence and antimicrobial susceptibility of BRD bacterial pathogens at feedlot processing (1 day on feed (1DOF)), 12 days later (13DOF), and for a subset at 36DOF following metaphylactic antimicrobial treatment. Mixed-origin steer calves (n = 1599) from Western Canada were managed as 16 pens of 100 calves, receiving either tulathromycin (n = 1199) or oxytetracycline (n = 400) at arrival. Deep nasopharyngeal swabs collected at all time points underwent culture and antimicrobial susceptibility testing (AST). Variability in the pen-level prevalence of bacteria and antimicrobial susceptibility profiles were observed over time, between years, and metaphylaxis options. Susceptibility to most antimicrobials was high, but resistance increased from 1DOF to 13DOF, especially for tetracyclines and macrolides. Simulation results suggested that sampling 20 to 30 calves per pen of 200 reflected the relative pen-level prevalence of the culture and AST outcomes of interest. Pen-level assessment of antimicrobial resistance early in the feeding period can inform the evaluation of AMU protocols and surveillance efforts and support antimicrobial stewardship in animal agriculture.

Predicting immunization status at arrival in Tennessee stocker calves

This study aimed to test if externally observed physical char­acteristics of calves on arrival at a stocker facility could be used to predict calfhood immunization status based on ob­served antibody titer levels. Knowledge of highly correlated features could allow stocker operators to mitigate the risk of bovine respiratory disease through informed buying practices and targeted management strategies, thus lowering morbidi­ty, mortality and treatment costs. Ear notches, blood and visu­al attributes were collected for 408 stocker calves at 4 farms in Tennessee. Each animal was tested for bovine viral diarrhea vi­rus-persistently infected status and titer levels for 3 viral agents that are present in most respiratory disease vaccines. Multiple visual characteristics were predictive of likely vaccination for BRD-causing agents, including the presence of a prior ear tag (1.6 times), castrated males (1.26 times), polled cattle (4.8 times), body condition score (1.46 times per full score), and being de­clared vaccinated or preconditioned (2.2 times).
 Additionally, we followed 60 calves through the stocker phase to ascertain how preconditioning affected downstream health events and performance. We found that preconditioned calves had lower BRD incidence, a higher occurrence of multiple detectible viral titers, and gained more weight over 56 days than did naïve cattle. Interestingly, many calves marketed as preconditioned did not have detectible viral titers on arrival. This work identifies informed, practical solutions and man­agement decisions for stocker operations when purchasing calves. It also lays the groundwork for future work identifying ways to deliver precision management to stocker cattle.

443 Awardee Talk: Effects of a Supplemental Water Source and Trace-Mineral Based Electrolyte Drinking Solution on Intake, Performance, and Health of Newly Received Feedlot Calves

Abstract Rapidly rehydrating newly received feedlot cattle may reduce disease risks caused by the marketing and transportation-related restrictions on feed and water. The significant loss of water and key nutrients from the body can put the animal at increased risk for bovine respiratory disease (BRD). It is hypothesized that rapidly rehydrating calves upon arrival may reduce disease risks by facilitating an easier transition to the feedlot and limiting loss in value due to illness and decreased performance. The objective of this study was to rapidly replenish water and key nutrients in newly received feedlot calves by assessing water intake (WI) and providing a supplemental water source or a nutritional rehydration solution during the first three days after arrival. Crossbred heifers [n= 270; initial BW = 232 ± 16 kg] were individually weighed after 11 h transportation and sorted into 18 pens (6 pens/treatment). Treatments were: 1) Control (CON): standard in-pen automatic water source (Richie CM480; one waterer/pen); 2) Supplemental water source (SWS): CON + one additional stock tank/pen; and 3) Nutritional rehydration solution (NRS): trace-mineral based drinking solution provided with one stock tank/pen. Treatments were provided from days 1 to 4, after which supplemental tanks were removed. From days 5 to 56, cattle only had access to CON (automatic waterer). Water intake was measured daily throughout the trial, BW and whole blood (5 heifers/pen) were collected on days 1, 4, 14, 28, and 56. Treatment × experimental period interactions (P ≤ 0.03) were observed for WI, dry matter intake (DMI), average daily gain (ADG). The DMI was greater for both SWS and NRS than CON from days 5 to 15 (P ≤ 0.01), and SWS had greater DMI than CON from days 16 to 29 (P = 0.01). Both SWS and NRS had greater WI than CON from days 1 to 4 (P ≤ 0.001), but not from days 5 to 56 (P ≥ 0.36). The ADG was less for NRS than CON from days 1 to 4 (P = 0.01); however, treatments did not affect ADG from days 5 to 56 (P ≥ 0.12). No treatment or treatment × day or experimental period effects (P ≥ 0.061) were observed for BW and gain:feed (G:F). Treatments did not affect morbidity and mortality (P ≥ 0.20). No treatment effect or treatment × day interactions were observed for plasma glucose, non-esterified fatty acids, total red or white blood cell counts (P ≥ 0.23). Hematocrit and hemoglobin decreased for SWS and NRS when compared with CON (P ≤0.05). Bovine viral diarrhea virus (BVDV) antibodies increased for NRS when compared with SWS and CON (P = 0.004). The results suggest that providing SWS or NRS to newly received calves during the initial three days after arrival increases WI, DMI, antibodies against respiratory viruses, hydration, but has little impact on performance, blood metabolites, and immune cells.

A systematic review of the relationship between housing environmental factors and bovine respiratory disease in preweaned calves - Part 2: Temperature, relative humidity and bedding

Bovine respiratory disease (BRD) is a challenge in all housed farming systems that raise calves. Farm to farm variation in BRD prevalence can be partially attributed to variation in host immunity, pathogens and housing environment. Unlike host immunity and BRD pathogens, housing environment has not been well investigated. The objective of this systematic review was to identify the measurable environmental variables associated with BRD in housed preweaned calves. Pubmed, CAB Direct and Scopus databases were searched. To be considered for inclusion publications had to be published in English, before 24 November, 2022 and include at least one measurable/ manipulated environmental variable and a standardized method of BRD detection. In total 12 publications were included in this review. In this second part of the systematic review the environmental variables identified were; temperature (9 publications); relative humidity (8 publications); bedding (5 publications); ventilation (1 publication); air CO2 concentration (1 publication) and air velocity (4 publications). Of the publications that were examined a statistically significant relationship to BRD was identified in 4/9 publications examining temperature, 3/8 examining relative humidity, 2/4 examining air velocity, 2/5 examining bedding, 0/1 examining ventilation rates and 0/1 examining CO2 concentration. From this review it is clear high airspeed at calf level should be avoided as should deep, wet pack bedding. The relationship between BRD prevalence and both high and low temperature requires more investigation to identify temperature thresholds associated with increased risk of BRD as well as the most influential modifiers. An optimal environment for housed calves could not be clearly identified in this review.

Time-course RNA-Seq analysis defines immunological and inflammatory mechanisms influenced by bovine respiratory disease

Bovine respiratory disease (BRD) remains the leading disease in beef cattle. Host gene expression at facility arrival may indi­cate BRD risk, however, time-course RNA-Seq could define how BRD development influences immunological and inflammatory responses. Here, we evaluated blood transcriptomes of high-risk beef cattle at 3 timepoints to illustrate BRD-associated host response.

Impact of the host transcriptome on bovine respiratory disease treatment during backgrounding

Bovine respiratory disease (BRD) continues to be problematic across the beef cattle industry. Marketing strategies made prior to backgrounding may shift the initial treatment for BRD into a different phase of production, and the importance of host gene expression on BRD incidence is poorly understood. Whole blood transcriptomes measured on arrival could inform our ability to better manage these cattle and predict BRD risk. Our objective was to compare host transcriptomes as measured on arrival at a backgrounding facility on the probability of being treated for BRD during the following 45 days on feed.

Effects of Echinacea purpurea supplementation on markers of immunity, health, intake, and growth of dairy calves

Echinacea purpurea (EP) is an herb that has demonstrated immunostimulatory and anti-inflammatory effects with the potential to improve immunity, health, and performance in animals. The objective of this study was to investigate how supplementing calves with EP affects their blood immunity marker profile, health, intake, and growth. Male Holstein calves (n = 240), sourced from local dairy farms or auction, arrived at a rearing facility between 5 and 14 d of age and were kept in individual pens in 1 of 3 rooms (80/room) for 56 d, and then put into groups for the remaining 21 d of the trial. Calves received milk replacer (MR) 2× per day for 56 d (total = 36 kg of MR) and had ab libitum water and starter access. Within room, calves were randomly assigned to 1 of 3 treatments: (1) control (n = 80), (2) 3g of dried (powder) EP extract per day split over 2 milk feedings from experiment d 14-28 (n = 80), and (3) 3 g of dried (powder) EP extract per day split over 2 milk feedings from experiment d 1-56 (E56; n = 80). The powdered EP treatments were mixed into the liquid MR. On d 1, 14, 28, and 57 rectal temperatures and blood were collected from a subset of calves (n = 117; 39 calves/treatment), and blood serum was assessed for serum total protein (d 1), haptoglobin, white blood cells, and cytokines. Failed transfer of passive immunity was defined as serum total protein <5.2 g/dL. Calves were health scored 2× per day, receiving fecal and respiratory scores until d 28 and 77, respectively. Calves were weighed on arrival and then weekly until d 77. Milk replacer and feed refusals were recorded. Supplementation of EP was associated with lower haptoglobin levels, segmented neutrophil counts, segmented neutrophil per lymphocyte ratio, respiratory scores in auction derived calves, and higher lymphocyte counts and d 28 rectal temperature. Of calves with heavier arrival body weight, E56 calves had greater postweaning weekly body weight. There was no detected effect of EP supplementation on total white blood cells, band neutrophil, monocyte, and basophil counts, IL-10, IL-6, and TNF-α levels, fecal scores, risk of receiving diarrhea and respiratory treatment, risk of bovine respiratory disease (calves were deemed at risk for bovine respiratory disease if they had at least 1 respiratory score ≥5), risk of mortality, MR and feed intake, average daily gain, and feed conversion ratio. Overall, EP supplementation to dairy calves was associated with immunomodulation and reduced inflammation, evidenced through blood markers, although only few minor health and growth improvements were observed. Benefits were observed particularly when fed across the whole milk feeding period.

Impacts of commingling preconditioned and auction-derived beef calves on bovine respiratory disease related morbidity, mortality, and weight gain.

Stressors predisposing to bovine respiratory disease (BRD) upon arrival in the feedlot, include the ranch to feedlot transition and mixing cattle from multiple sources. Preconditioning (PC) reduces multiple stressors, but commingling PC and auction-derived (AD) calves in a feedlot may increase BRD risk. Our objective was to evaluate PC calf performance over the first 40 days in the feedlot and determine impacts of commingling with varying proportions of AD calves (25, 50, and 75%). Calves were either preconditioned at one ranch (n = 250) or mixed-source and bought from a local auction (n = 250). At arrival, calves were assigned into 1 of 5 pens: 100 PC, 75 PC, 50 PC, 25 PC, and 0 PC, reflecting the percentage of PC calves in a 100-head pen. Over 40 days, morbidity in pen 100 PC was lower compared to 0 PC (24 vs. 50%, P < 0.001) and varied in commingled pens, being highest (63%) in 25 PC and least (21%) in 50 PC (P < 0.05). There were 3 AD deaths in 0 PC and 2 deaths in 25 PC. The AD calves in 0 PC were 3 times more likely to get BRD than PC calves in 100 PC; however, AD calves gained 0.49 kg/d more than PC calves (P < 0.0001). Ignoring pen placement, AD calves were 2.76 times more likely to get BRD but gained 0.27 kg/d more than PC calves (P < 0.0001). Commingling did not affect morbidity of PC (P = 0.5) or AD calves (P = 0.96), implying commingling did not affect health. Calves in 25 PC were 3.39 times more likely to get BRD than those in the 100 PC (P < 0.001). Furthermore, 25 PC calves gained the most (1.08 kg/d), followed by 50 PC (0.62 kg/d) and 75 PC (0.61 kg/d), compared to 100 PC (P < 0.05). Calf weight at arrival modified ADG (P < 0.05). In conclusion, PC calves had lower morbidity over the first 40 days, irrespective of commingling. With larger variations in arrival weight, there was no advantage of PC for ADG in the first 40 days. The unknown weaning strategies and comparable arrival weights of AD calves may have contributed to greater ADG in AD calves.

Machine-Learning Approach for Risk Estimation and Risk Prediction of the Effect of Climate on Bovine Respiratory Disease

Bovine respiratory disease (BRD) is a major cause of illness and death in cattle; however, its global extent and distribution remain unclear. As climate change continues to impact the environment, it is important to understand the environmental factors contributing to BRD’s emergence and re-emergence. In this study, we used machine-learning models and remotely sensed climate data at 2.5 min (21 km2) resolution environmental layers to estimate the risk of BRD and predict its potential future distribution. We analysed 13,431 BRD cases from 1727 cities worldwide between 2005 and 2021 using two machine-learning models, maximum entropy (MaxEnt) and Boosted Regression Trees (BRT), to predict the risk and geographical distribution of the risk of BRD globally with varying model parameters. Different re-sampling regimes were used to visualise and measure various sources of uncertainty and prediction performance. The best-fitting model was assessed based on the area under the receiver operator curve (AUC-ROC), positive predictive power and Cohen’s Kappa. We found that BRT had better predictive power compared with MaxEnt. Our findings showed that favourable habitats for BRD occurrence were associated with the mean annual temperature, precipitation of the coldest quarter, mean diurnal range and minimum temperature of the coldest month. Similarly, we showed that the risk of BRD is not limited to the currently known suitable regions of Europe and west and central Africa but extends to other areas, such as Russia, China and Australia. This study highlights the need for global surveillance and early detection systems to prevent the spread of disease across borders. The findings also underscore the importance of bio-security surveillance and livestock sector interventions, such as policy-making and farmer education, to address the impact of climate change on animal diseases and prevent emergencies and the spread of BRD to new areas.

Influence of the At-Arrival Host Transcriptome on Bovine Respiratory Disease Incidence during Backgrounding

Bovine respiratory disease (BRD) remains the leading disease within the U.S. beef cattle industry. Marketing decisions made prior to backgrounding may shift BRD incidence into a different phase of production, and the importance of host gene expression on BRD incidence as it relates to marketing strategy is poorly understood. Our objective was to compare the influence of marketing on host transcriptomes measured on arrival at a backgrounding facility on the subsequent probability of being treated for BRD during a 45-day backgrounding phase. This study, through RNA-Seq analysis of blood samples collected on arrival, evaluated gene expression differences between cattle which experienced a commercial auction setting (AUCTION) versus cattle directly shipped to backgrounding from the cow-calf phase (DIRECT); further analyses were conducted to determine differentially expressed genes (DEGs) between cattle which remained clinically healthy during backgrounding (HEALTHY) versus those that required treatment for clinical BRD within 45 days of arrival (BRD). A profound difference in DEGs (n = 2961) was identified between AUCTION cattle compared to DIRECT cattle, regardless of BRD development; these DEGs encoded for proteins involved in antiviral defense (increased in AUCTION), cell growth regulation (decreased in AUCTION), and inflammatory mediation (decreased in AUCTION). Nine and four DEGs were identified between BRD and HEALTHY cohorts in the AUCTION and DIRECT groups, respectively; DEGs between disease cohorts in the AUCTION group encoded for proteins involved in collagen synthesis and platelet aggregation (increased in HEALTHY). Our work demonstrates the clear influence marketing has on host expression and identified genes and mechanisms which may predict BRD risk.

Comprehensive Outcomes Affected by Antimicrobial Metaphylaxis of Feedlot Calves at Medium-Risk for Bovine Respiratory Disease from a Randomized Controlled Trial

The objectives were to evaluate the effects of metaphylaxis (META) and pull-and-treat (PT) programs on health, antimicrobial use, beef production, economics, and greenhouse gas emissions in cattle at medium risk for bovine respiratory disease (BRD). A randomized complete block design was used at two US commercial feedlots. Steers and heifers [2366 total; 261 (±11.0) kg initial weight] were blocked by sex and feedlot arrival, and allocated to one of two pens within a block (16 pens total, eight blocks). Pens were randomly assigned to treatment: META, tulathromycin injection at initial processing; or PT, tulathromycin injection only for first clinical BRD treatment. Data were analyzed with linear and generalized linear mixed models. There was greater BRD morbidity in PT than META cattle (17.2% vs. 7.3% respectively; p < 0.01), and greater total mortality (2.5% vs. 1.1% respectively; p = 0.03). Per animal enrolled, 1.1 antimicrobial doses were used for META compared to 0.2 for PT (p < 0.01). Per animal enrolled, final live (p = 0.04) and carcass (p = 0.08) weights were greater for META than PT; however, net returns ($/animal) were not significantly different (p = 0.71). Compared to PT, total lifetime estimated CO2 equivalent emissions from production were reduced by 2% per unit of live weight for META (p = 0.09). While antimicrobial use was reduced with PT, there may be substantial negative impacts on other outcomes if META was not used in this type of cattle population.

Tulathromycin metaphylaxis increases nasopharyngeal isolation of multidrug resistant Mannheimia haemolytica in stocker heifers.

Bovine respiratory disease (BRD) is a leading cause of disease in feedlot and stocker calves with Mannheimia haemolytica (MH) as one of the most common etiologies. One of the most effective means of controlling BRD is through metaphylaxis, which involves administering antimicrobials to all animals at high risk of developing BRD. However, increasing prevalence of multidrug resistant (MDR) MH may reduce efficacy of metaphylaxis due to decreased susceptibility to drugs used for metaphylaxis. Primarily, this study aimed to determine the effect of tulathromycin metaphylaxis and subsequent BRD treatment on antimicrobial resistance (AMR) in MH isolated from stocker calves. Secondary objectives included evaluating the effect of metaphylaxis and treatment for BRD on animal health and comparing the genetic relationship of MH isolated. Crossbred beef heifers (n = 331, mean weight = 232, SD = 17.8 kg) at high risk for BRD were randomly assigned to receive tulathromycin metaphylaxis (META, n = 167) or not (NO META, n = 164). Nasopharyngeal swabs were collected for MH isolation, antimicrobial susceptibility testing and whole genome sequencing at arrival and 3 (WK3) and 10 (WK10) weeks later. Mixed-effects logistic regression was used to identify risk factors for isolation of MH and MDR MH (resistant to ≥3 antimicrobial drug classes) at 3 and 10 weeks, BRD morbidity, and crude mortality. Animals in the META group had higher odds of isolation of MDR MH at 3 weeks [OR (95% CI) = 13.08 (5-30.9), p < 0.0001] and 10 weeks [OR (95% CI) = 5.92 (1.34-26.14), p = 0.019] after arrival. There was no difference in risk of isolation of any MH (resistant or susceptible) between META and NO META groups at all timepoints. Animals in the NO META group had 3 times higher odds of being treated for BRD [WK3: OR (95% CI) = 3.07 (1.70-5.52), p = 0.0002; WK10: OR (95% CI) = 2.76 (1.59-4.80), p = 0.0002]. Antimicrobial resistance genes found within isolates were associated with integrative conjugative element (ICE) genes. Tulathromycin metaphylaxis increased risk of isolation of MDR MH and in this population, the increase in MDR MH appeared to be associated with ICE containing antimicrobial resistance genes for multiple antimicrobial classes. This may have important implications for future efficacy of antimicrobials for control and treatment of BRD.

Impact of Water Sources and Shared Fence Lines on Bovine Respiratory Disease Incidence in the First 45 Days on Feed.

Bovine respiratory disease (BRD) is a frequent disease in feedlot cattle, but little is known on the role of pen housing conditions. The objective of this research is to use a retrospective analysis with data from 10 U.S. feedlots to determine potential associations between BRD risk during the first 45 days after arrival with pen-level management factors including the number of water sources, shared water sources, and shared fence lines. Generalized linear mixed models were used to evaluate associations between management factors, cattle demographics, and BRD incidence. The effect of shared water sources on BRD risk was modified by arrival weight and cohort size (p &lt; 0.05). Cattle with two water sources had lower BRD morbidity (5.55% ± 0.98) compared to cattle with one water source (8.80% ± 1.50) when arrival weight was 227 kg to 272 kg, while there were few differences in heavier weight cattle. Cattle with two water sources had lower BRD morbidity (3.11% ± 0.56) compared to one water (5.50% ± 0.10) when cohort size was 100-175 head, but there were no BRD morbidity differences when bigger or smaller cohorts were evaluated. Shared fence lines and water sources were associated with BRD risk; however, no biologically meaningful results were identified. The number of water sources was associated with BRD risk, and effects were modified by cohort size and arrival weight.

PSX-B-10 Characterization and Comparison of the Bovine Nasal Microbiome to Exposure of Persistently Infected Bovine Viral Diarrhea Virus

Abstract Bovine viral diarrhea virus (BVDV) is a critical disease negatively impacting many facets of the cattle production system. Cattle infected with the persistent (PI) form of BVDV are the primary reservoirs and source of transmission and may be implicated with an increased risk of bovine respiratory disease (BRD) to exposed calves in feedlots. To date, little to no data exists regarding characterization of the effects PI-BVDV has on the bovine nasal microbiome, an important feature for bovine health. To investigate these effects, Angus-crossbred beef calves were selected and randomly assigned to either continuous exposure (E, n = 3) or non-exposure (NE, n = 3) to an auction market sourced PI-BVDV positive (PI, n = 1) calf from weaning to 112 days post-weaning. Nasal swab samples were collected upon weaning, 56 days post-weaning, and 112 days post-weaning. Next generation sequencing was used to measure the effects of PI-BVDV on the nasal microbiome. Alpha diversity, including Shannon Index and Observed OTUs, and beta diversity, including Bray-Curtis and Jaccard distances, were not different (P &amp;gt; 0.05) between treatments. Next, community structure was assessed at the amplicon sequence variant (ASV) level and LEfSe was used to identify the bacterial biomarkers for each treatment. Results indicated that ASV5-Mycoplasma could be a biomarker for the PI and E treatments due to its high relative abundance in each when compared with the NE treatment. Overall, ASV5-Mycoplasma was identified as a potential biomarker for the prediction and diagnosis of persistently infected bovine viral diarrhea virus among both calves infected with and exposed to the virus and may be an additional biomarker for the increased risk of bovine respiratory disease in exposed feedlot cattle.

PSXIII-B-17 Risk of Bovine Respiratory Disease by Pathogen Incidence

Abstract Bovine respiratory disease (BRD) affects millions of cattle in the US annually. This study sought to identify commensal pathogens in animals without clinical signs that were predictive of clinical BRD using the Wisconsin Health Scoring (WHS) system. Cases were healthy cattle that were later diagnosed with BRD (WHS ≥ 5.0), positive controls (PC) were cattle that were diagnosed with BRD at the time of initial sampling and negative controls (NC) were those that remained healthy throughout the study (WHS ≤ 4.0). Beef feedlot cattle were sampled in Colorado (CO; cases = 13, NC = 500, PC = 488) and Washington (WA; cases = 5, NC = 499, PC = 506). Preweaned Holstein dairy calves were sampled from California (CA; cases = 73, NC = 1017, PC = 1003) and New Mexico (NM; cases = 25, NC = 381, PC = 376). For each animal, mid-nasal and deep pharyngeal swabs were used to test for nine BRD pathogens. ANOVA testing (P&amp;lt; 0.05) and odds ratios (OR) were calculated for each population. In CO, bovine viral diarrhea virus (P = 0.0001, OR = 13.1) and Histophilus somni (P = 0.008, OR = 4.2) were predictive of cattle that would be diagnosed with BRD while bovine respiratory syncytial virus (BRSV; P = 1.1 × 10-6, OR = 40.8) was most predictive in WA. In NM, BRSV (P = 0.005, OR = 5.8) was also predictive of clinical BRD. No pathogen was predictive of BRD risk in CA. Prevalence of the predictive pathogen was higher (P &amp;lt; 0.05) in cases than in PC cattle suggesting that the incidence of pathogens taken at the time of BRD diagnosis may not reflect the pathogen initiating disease. These results also highlight geographical differences in the incidence of BRD pathogens which should be considered when managing to reduce disease.

Efficiency-corrected PCR quantification for identification of prevalence and load of respiratory disease-causing agents in feedlot cattle.

Bovine respiratory disease (BRD) is the most prevalent disease in feedlot cattle worldwide with Bovine alphaherpesvirus 1 (BoAHV1), Histophilus somni, Mannheimia haemolytica, Mycoplasma bovis, Pasteurella multocida and Trueperella pyogenes accepted to be common etiological agents associated with BRD. Although these agents are common in the upper and lower airways in clinical BRD cases, some also exist as normal flora suggesting their presence in the upper airways alone is not necessarily informative with respect to disease status or risk. To determine the relationship between presence, load and disease status, we investigated the relationship between load in the upper airways at induction and active BRD cases in feedlot cattle using efficiency-corrected PCR quantification. By this approach, we were able to accurately determine the prevalence and load of the key BRD agents in the upper respiratory tract showing that cattle in the hospital pen had a higher prevalence, and load, of these agents both singly and in combination compared to cattle sampled at feedlot induction. A combination of agents was the most accurate indicator of BRD risk with cattle with four or more agents detected in the upper airway more likely to be undergoing treatment for BRD than non-BRD ailments. In addition, M. bovis was rarely detected at feedlot induction but was identified at high prevalence in cattle in the hospital pen. These findings present a potential new technological approach for the investigation, analysis and identification of BRD-associated viral and bacterial agents for Australian feedlot systems as well as for BRD disease management and treatment.

Assessment of Diversity of Antimicrobial Resistance Phenotypes and Genotypes of Mannheimia haemolytica Isolates From Bovine Nasopharyngeal Swabs.

The threat of bovine respiratory disease (BRD) for cattle operations is exacerbated by increasing prevalence of antimicrobial resistance (AMR) in Mannheimia haemolytica, a leading cause of BRD. Characterization of AMR in M. haemolytica by culture and susceptibility testing is complicated by uncertainty regarding the number of colonies that must be selected to accurately characterize AMR phenotypes (antibiograms) and genotypes in a culture. The study objective was to assess phenotypic and genotypic diversity of M. haemolytica isolates on nasopharyngeal swabs (NPS) from 28 cattle at risk for BRD or with BRD. NPS were swabbed onto five consecutive blood agar plates; after incubation up to 20 M. haemolytica colonies were selected per plate (up to 100 colonies per NPS). Phenotype was determined by measuring minimum inhibitory concentrations (MIC) for 11 antimicrobials and classifying isolates as resistant or not. Genotype was indirectly determined by matrix-assisted laser desorption/ionization time of flight mass spectroscopy (MALDI-TOF MS). NPS from 11 of 28 cattle yielded at least one M. haemolytica isolate; median (range) of isolates per NPS was 48 (1–94). NPS from seven cattle yielded one phenotype, 3 NPS yielded two, and 1 NPS yielded three; however, within a sample all phenotypic differences were due to only one MIC dilution. On each NPS all M. haemolytica isolated were the same genotype; genotype 1 was isolated from three NPS and genotype two was isolated from eight. Diversity of M. haemolytica on bovine NPS was limited, suggesting that selection of few colonies might adequately identify relevant phenotypes and genotypes.

Predicting Bovine Respiratory Disease Risk in Feedlot Cattle in the First 45 Days Post Arrival.

Bovine respiratory disease (BRD) is the leading cause of morbidity in feedlot cattle. The ability to accurately identify the expected BRD risk of cattle would allow managers to detect high-risk animals more frequently. Five classification models were built and evaluated towards predicting the expected BRD risk (high/low) of feedlot cattle within the first 45 days on feed (DOF) and incorporate an economic analysis to determine the potential health cost advantage when using a predictive model compared with standard methods. Retrospective data from 10 U.S. feedlots containing 1733 cohorts representing 188,188 cattle with known health outcomes were classified into high- (≥15% BRD morbidity) or low- (<15%) BRD risk in the first 45 DOF. Area under the curve was calculated from the test dataset for each model and ranged from 0.682 to 0.789. The economic performance for each model was dependent on the true proportion of high-risk cohorts in the population. The decision tree model displayed a greater potential economic advantage compared with standard procedures when the proportion of high-risk cohorts was ≤45%. Results illustrate that predictive models may be useful at delineating cattle as high or low risk for disease and may provide economic value relative to standard methods.

Scoping Review on Risk Factors and Methods for the Prevention of Bovine Respiratory Disease Applicable to Cow-Calf Operations.

Simple SummaryBovine respiratory disease (BRD) is common in cattle populations and has been named as one of three diseases where antibiotics are most frequently used in cow–calf operations in California. Antibiotics are typically used to treat or prevent the disease, but recent concerns about antibiotic resistance of pathogens in animals or spreading from animals to people have led to the call for more judicious use of these drugs. The present review summarizes the English scientific literature on articles about risk factors for the disease as well as ways to prevent BRD that are applicable to cow–calf operations. Numerous management and animal factors have been identified as increasing the risk for BRD. Vaccinations, metaphylactic use of antibiotics, and feed supplements are areas of research into the prevention of BRD. Genetics have also been explored to determine the heritability of BRD resistance. While vaccinations and metaphylactic use of antibiotics have been evaluated in multiple systematic reviews and meta-analyses, these types of summaries are missing for commonly studied feed supplements, such as yeast and trace minerals, and the use of nitric oxide releasing substance to prevent BRD. Further, it would be beneficial to summarize the knowledge on management related risk factors in literature reviews.The presented scoping review summarizes the available research evidence and identifies gaps in knowledge for bovine respiratory disease (BRD) prevention. Published literature on BRD from 1990 to April 2021 was searched in online databases, including Medline, CAB s, Scopus, Biosis, and Searchable Proceedings of Animal Conferences. Citations were systematically evaluated in a three-stage approach using commercial software and summarized in a scoping review format. A total of 265 publications were included in this review with herd/farm management (27.9%) as the most prevalent factors studied, followed by metaphylaxis (24.5%), vaccinations (24.1%), diet formulations, and nutritional supplementations (17.7%), animal characteristics (10.2%), and less common interventions and risk factors (6.4%). A high proportion of studies under herd/farm management (73%), metaphylaxis (86%), vaccinations (70%), animal characteristics (78%), and less common interventions and risk factors (59%) showed either significant effects on reducing BRD morbidity or significant differences of BRD between treatments. However, diet and nutritional supplementations reduced BRD only in 30% of research publications. Most studies on BRD were performed in feedlot populations, and more studies in cow–calf populations are needed. We further suggest meta-analyses on the use of yeast and trace mineral supplementation, and nitric oxide-releasing solution for BRD prevention.

Additive Bayesian network analysis of the relationship between bovine respiratory disease and management practices in dairy heifer calves at pre-weaning stage

BackgroundNursery farms that accept nursing and growing pre-weaned heifer calves from private dairy farms must work to prevent bovine respiratory disease (BRD). Knowledge of the BRD-associated risk factors related to calf management and calves’ condition will help to develop appropriate neonatal management practices at original farms and to identify calves at higher risk for BRD at nursery farms. In this study, the relationship between BRD and calf management practices (colostrum feeding, dam parity, serum total protein concentration at introduction (TP), body weight at introduction, introduction season, and daily average growth) was investigated using observational data from pre-weaned dairy calves introduced into a nursery farm in Hokkaido, Japan between 2014 and 2018 (n = 3185). Using additive Bayesian network (ABN) analysis, which is a multivariate statistical modelling approach, the direct and indirect associations between these factors were assessed.ResultsColostrum feeding contributed to an increase in TP (correlation 1.02 [95 % CI, 0.94;1.10]), which was negatively associated with BRD directly (log odds ratio − 0.38 [− 0.46;−0.31]) and indirectly through increasing daily growth (correlation 0.12 [0.09;0.16]). Calves of multiparous dams had higher body weight at introduction (correlation 0.82 [0.74;0.89]), which indirectly reduced BRD risk through the increasing daily growth (correlation 0.17 [0.14;0.21]). Calves introduced during winter had the highest risk for BRD (log odds ratio 0.29 [0.15;0.44]), while those introduced in summer had the lowest risk (log odds ratio − 0.91 [− 1.06;−0.75]). The introduction season was also associated with BRD indirectly through dam parity, body weight at introduction, and daily growth.ConclusionsThe following calf management practices are recommended for preventing BRD in pre-weaned calves at nursery farms: (1) encouraging colostrum feeding to neonatal calves at their original farms; and (2) identifying calves with higher BRD risk, i.e., those without feeding colostrum, born to primiparous cattle, with low body weight at introduction, and/or introduced in winter, and paying intensive attention to the calves for rapid detection of BRD. ABN analysis applied enabled us to understand the complex inter-relationships between BRD incidence and the risk factors, which will help to reduce BRD incidence and to rear healthy calves at nursery farms.