Bottom Water O2 Concentrations Research Articles

Nitrogen cycling in sediments on the NW African margin inferred from N and O isotopes in benthic chambers

Benthic nitrogen cycling in the Mauritanian upwelling region (NW Africa) was studied in June 2014 from the shelf to the upper slope where minimum bottom water O2 concentrations of 25 µM were recorded. Benthic incubation chambers were deployed at 9 stations to measure fluxes of O2, dissolved inorganic carbon (DIC) and nutrients (NO3-, NO2-, NH4+, PO43-, H4SiO4) along with the N and O isotopic composition of nitrate (δ15N-NO3- and δ18O-NO3-) and ammonium (δ15N-NH4+). O2 and DIC fluxes were similar to those measured during a previous campaign in 2011 whereas NH4+ and PO43- fluxes on the shelf were 2 – 3 times higher and possibly linked to a long-term decline in bottom water O2 concentrations. The mean isotopic fractionation of NO3- uptake on the margin, inferred from the loss of NO3- inside the chambers, was 1.5 ± 0.4 ‰ for 15/14N (15ϵapp) and 2.0 ± 0.5 ‰ for 18/16O (18ϵapp). The mean 18ϵapp:15ϵapp ratio on the shelf (< 100 m) was 2.1 ± 0.3, and higher than the value of 1 expected for microbial NO3-reduction. The 15ϵapp are similar to previously reported isotope effects for NO3- respiration in marine sediments but lower than determined in 2011 at a same site on the shelf. The sediments were also a source of 15N-enriched NH4+ (9.0 ± 0.7 ‰). A numerical model tuned to the benthic flux data and that specifically accounts for the efflux of 15N-enriched NH4+ from the seafloor, predicted a net benthic isotope effect of N loss (15ϵsed) of 3.6 ‰; far above the more widely considered value of ~0‰. This result is further evidence that the assumption of a universally low or negligible benthic N isotope effect is not applicable to oxygen-deficient settings. The model further suggests that 18ϵapp:15ϵapp trajectories > 1 in the benthic chambers are most likely due to aerobic ammonium oxidation and nitrite oxidation in surface sediments rather than anammox, in agreement with published observations in the water column of oxygen deficient regions.

Sedimentation rate and organic matter dynamics shape microbiomes across a continental margin

Abstract. Marine sedimentation rate and bottom-water O2 concentration control organic carbon remineralization and sequestration across continental margins, but whether and how they shape microbiome architecture (the ultimate effector of all biogeochemical phenomena) across shelf and slope sediments is still unclear. Here we reveal distinct microbiome structures and functions, amidst comparable pore fluid chemistries, along 300 cm sediment horizons underlying the seasonal (shallow coastal; water depth: 31 m) and perennial (deep sea; water depths: 530 and 580 m) oxygen minimum zones (OMZs) of the Arabian Sea, situated across the western Indian margin. The sedimentary geomicrobiology was elucidated by analyzing metagenomes, metatranscriptomes, enrichment cultures, and depositional rates measured via radiocarbon and lead excess dating; the findings were then evaluated in light of the other geochemical data available for the cores. Along the perennial-OMZ sediment cores, microbial communities were dominated by Gammaproteobacteria and Alphaproteobacteria, but in the seasonal-OMZ core communities were dominated by Euryarchaeota and Firmicutes. As a perennial-OMZ signature, a cryptic methane production–consumption cycle was found to operate near the sediment surface, within the sulfate reduction zone; overall diversity, as well as the relative abundances of anaerobes requiring simple fatty acids (methanogens, anaerobic methane oxidizers, sulfate reducers, and acetogens), peaked in the topmost sediment layer and then declined via synchronized fluctuations until the sulfate–methane transition zone was reached. The microbiome profile was completely reversed in the seasonal-OMZ sediment horizon. In the perennial-OMZ sediments, deposited organic carbon was higher in concentration and rich in marine components that degrade readily to simple fatty acids; simultaneously, lower sedimentation rate afforded higher O2 exposure time for organic matter degradation despite perennial hypoxia in the bottom water. The resultant abundance of reduced carbon substrates eventually sustained multiple inter-competing microbial processes in the upper sediment layers. The entire geomicrobial scenario was opposite in the sediments of the seasonal OMZ. These findings create a microbiological baseline for understanding carbon–sulfur cycling in distinct depositional settings and water column oxygenation regimes across the continental margins.

Removal of phosphorus and nitrogen in sediments of the eutrophic Stockholm archipelago, Baltic Sea

Abstract. Coastal systems can act as filters for anthropogenic nutrient input into marine environments. Here, we assess the processes controlling the removal of phosphorus (P) and nitrogen (N) for four sites in the eutrophic Stockholm archipelago. Bottom water concentrations of oxygen (O2) and P are inversely correlated. This is attributed to the seasonal release of P from iron-oxide-bound (Fe-oxide-bound) P in surface sediments and from degrading organic matter. The abundant presence of sulfide in the pore water and its high upward flux towards the sediment surface (∼4 to 8 mmol m−2 d−1), linked to prior deposition of organic-rich sediments in a low-O2 setting (“legacy of hypoxia”), hinder the formation of a larger Fe-oxide-bound P pool in winter. This is most pronounced at sites where water column mixing is naturally relatively low and where low bottom water O2 concentrations prevail in summer. Burial rates of P are high at all sites (0.03–0.3 mol m−2 yr−1), a combined result of high sedimentation rates (0.5 to 3.5 cm yr−1) and high sedimentary P at depth (∼30 to 50 µmol g−1). Sedimentary P is dominated by Fe-bound P and organic P at the sediment surface and by organic P, authigenic Ca-P and detrital P at depth. Apart from one site in the inner archipelago, where a vivianite-type Fe(II)-P mineral is likely present at depth, there is little evidence for sink switching of organic or Fe-oxide-bound P to authigenic P minerals. Denitrification is the major benthic nitrate-reducing process at all sites (0.09 to 1.7 mmol m−2 d−1) with rates decreasing seaward from the inner to outer archipelago. Our results explain how sediments in this eutrophic coastal system can remove P through burial at a relatively high rate, regardless of whether the bottom waters are oxic or (frequently) hypoxic. Our results suggest that benthic N processes undergo annual cycles of removal and recycling in response to hypoxic conditions. Further nutrient load reductions are expected to contribute to the recovery of the eutrophic Stockholm archipelago from hypoxia. Based on the dominant pathways of P and N removal identified in this study, it is expected that the sediments will continue to remove part of the P and N loads.

Uranium reduction and isotopic fractionation in reducing sediments: Insights from reactive transport modeling

Uranium concentrations and isotopic ratios (238U/235U, denoted as δ238U) have been used to provide quantitative information about the degree of oxygenation and de-oxygenation of past oceans. The potential to constrain changes in global redox conditions, in contrast to many other proxies that reflect local conditions, is a particular strength of the uranium isotope approach. Because uranium reduction primarily occurs in sediments underlying anoxic water columns rather than in the anoxic water column itself, the removal of uranium in organic-rich shales is the largest lever on seawater δ238U. Accordingly, accumulation and isotopic fractionation are modulated by local variations in productivity, basin connectivity, sedimentation rate, and bottom-water redox conditions. To isolate the processes at the sediment-water interface that control δ238U and uranium accumulation in reducing sediments, we constructed a reactive transport model that couples biogeochemical reactions to diffusive transport and the burial of solutes and minerals.Using the model framework, we test the sensitivity of authigenic uranium isotopic fractionation and accumulation to oxygenation, permeability, sedimentation rate, organic carbon delivery, and basin restriction. Our results demonstrate that these external forcings produce diagnostic patterns in isotopic fractionation. Specifically, the model predicts that authigenic δ238U is sensitive to productivity because of the associated organic carbon burial rate. Moreover, our results suggest that the isotopic offset does not vary significantly due to changing bottom-water O2 concentrations, but the amount of accumulation does—a result that differs from previous estimates. Water column uranium reduction adds additional complexity to the ultimate δ238U value. The predictive patterns derived from model results can offer insight into local depositional conditions, such as sedimentation patterns. Collectively, these effects—including bottom-water redox conditions and related reducing sediments—alter the isotopic signature of the overlying water column according to the authigenic δ238U value and the diffusive fluxes arising from porewater concentration gradients. More broadly, this work provides important new constraints on the major controls on the δ238U of sediments while also supporting its use as a proxy for global marine redox conditions.

Ecosystem functioning along gradients of increasing hypoxia and changing soft-sediment community types

Marine ecosystems world-wide are threatened by oxygen deficiency, with potential serious consequences for ecosystem functioning and the goods and services they provide. While the effects of hypoxia on benthic species diversity are well documented, the effects on ecosystem function have only rarely been assessed in real-world settings. To better understand the links between structural changes in macro- and meiofaunal communities, hypoxic stress and benthic ecosystem function (benthic nutrient fluxes, community metabolism), we sampled a total of 11 sites in Havstensfjord and Askeröfjord (Swedish west coast) in late summer, coinciding with the largest extent and severity of seasonal hypoxia in the area. The sites spanned oxic to anoxic bottom water, and a corresponding gradient in faunal diversity. Intact sediment cores were incubated to measure fluxes of oxygen and nutrients (NO3−, NO2−, NH4+, PO43−, SiO4) across the sediment-water interface. Sediment profile imaging (SPI) footage was obtained from all sites to assess structural elements and the bioturbation depth, and additional samples were collected to characterise sediment properties and macro- and meiofaunal community composition. Bottom-water O2 concentration was the main driver of macrofauna communities, with highest abundance and biomass, as well as variability, at the sites with intermediate O2 concentration. Meiofauna on the other hand was less sensitive to bottom-water O2 concentration. Oxygen was the main driver of nutrient fluxes too, but macrofauna as well meiofauna were also significant predictors; DistLM analyses indicated that O2 concentration, macrofaunal abundance or biomass, and meiofaunal abundance collectively explained 63%, 30% and 28% of the variation in sediment O2 consumption, NH4+flux and PO43− flux, respectively. The study provides a step towards a more realistic understanding of the link between benthic fauna and ecosystem functioning, and the influence of disturbance on this relationship, which is important for management decisions aimed at protecting the dwindling biodiversity in the coastal zones around the world.

The effect of oxygen availability on long‐distance electron transport in marine sediments

AbstractCable bacteria are long, multicellular, filamentous bacteria that can conduct electrons over centimeter distances in marine and freshwater sediments. Recent studies indicate that cable bacteria are widely present in many coastal environments, where they exert a major influence on the biogeochemistry of the sediment. Their energy metabolism can be based on the aerobic oxidation of sulfide, and hence to better understand their natural occurrence and distribution, we examined the growth and activity of cable bacteria in relation to bottom water oxygenation. To this end, we conducted laboratory sediment incubations at four different O2 levels in the overlying water (10%, 20%, 40%, and 100% air saturation). The abundance of cable bacteria was determined by fluorescence in situ hybridization, while their activity was assessed via microsensor profiling and geochemical pore‐water analysis. Cable bacteria did not develop in the 10% air saturation O2 incubation but were present and active at all higher O2 levels. These data show that microbial long‐distance electron transport can occur under a wide range of bottom water O2 concentrations. However, the growth rate was notably slower at lower oxygen concentrations, suggesting a reduced metabolic activity of the population when the O2 supply becomes restricted. Finally, in response to lower O2 levels, cable bacteria filaments appear to partially emerge out of the sediment and extend into the overlying water, thus likely enhancing their oxygen supply.

Contrasting fates of organic matter in locations having different organic matter inputs and bottom water O2 concentrations

The goals of this work were to study sedimentary organic matter (OM) composition and transformation since the end of the last deglaciation and to evaluate the influence of contrasting depositional conditions on these parameters. One station was located in the Lower St. Lawrence Estuary (LSLE) where the current bottom waters are hypoxic and receive terrigenous and marine OM. The other station, located in the Gulf of St. Lawrence (GSL), has more oxygenated bottom waters and almost only marine OM inputs. Analyses included enantiomers of amino acids (L and D-AA) and muramic acid that provide different markers of OM alteration state and reactivity and of bacterial contribution to OM composition and diagenesis. The markers clearly indicated the increase in OM alteration state with depth in the sediments of the LSLE and the GSL. The steady decrease in AA yields with depth confirmed the preferential degradation of AA compared to the rest of the OM. The OM in the surface sediment of the LSLE was less altered than that of the GSL and was enriched in bacterial biomass as indicated by much higher muramic acid yields. Results indicated that an important degradation of particulate organic matter occurs in the water column in the GSL, while it takes place mostly in the sediments in the LSLE. The presence of heterogeneous OM and hypoxic conditions in the LSLE likely reduce OM degradation rate in its deep water layer. However, the zone near the water-sediment interface is responsible for large variations in AA composition at both locations. A relatively new redox index, based on AA composition, was tested and appeared robust. This study highlights the importance of ambient conditions in determining the fate of OM and in the biogeochemical cycles of vital elements.

Assessing oxygen depletion in the Northeastern Pacific Ocean during the last deglaciation using I/Ca ratios from multiple benthic foraminiferal species

AbstractPaleo‐redox proxies are crucial for reconstructing past bottom water oxygen concentration changes brought about by ocean circulation and marine productivity shifts in response to climate forcing. Carbonate I/Ca ratios of multiple benthic foraminifera species from Ocean Drilling Program Hole 1017E—a core drilled within the Californian oxygen minimum zone (OMZ), on the continental slope—are employed to reexamine the transition from the well‐oxygenated last glacial into poorly oxygenated modern conditions. The redox and export productivity history of this site is constrained by numerous proxies used to assess sensitivity of I/Ca ratios of benthic foraminifera to changes in bottom and pore water O2 concentrations. Reconstructed iodate (IO3−) availability is from the I/Ca ratio of epifaunal (Cibicidoides sp.), shallow infaunal (Uvigerina peregrina), and deep infaunal (Bolivina spissa) foraminifera. The reconstructed IO3− availability profile is used to determine the contribution of bottom water O2 relative to oxidant demand on pore water O2 concentrations. These results suggest that high export productivity on the California Margin drove low pore water O2 concentrations during the Bølling. In contrast, low bottom water O2 concentrations at 950 m water depth only contributed to reduced sediments during the Allerød. Increased contribution of modified North Pacific Intermediate Water to the California Current System ventilated the California OMZ during the late glacial and the Younger Dryas such that water overlying the site was oxygenated. These results highlight the promising potential of this new proxy for understanding the relative influence of bottom water O2 concentration and pore water oxidant demand on OMZs.

Comparative organic geochemistry of Indian margin (Arabian Sea) sediments: estuary to continental slope

Abstract. Surface sediments from sites across the Indian margin of the Arabian Sea were analysed for their elemental and stable isotopic organic carbon (Corg) and total nitrogen compositions, grain size distributions and biochemical indices of organic matter (OM) source and/or degradation state. Site locations ranged from the estuaries of the Mandovi and Zuari rivers to depths of ~ 2000 m on the continental slope, thus spanning nearshore muds and sands on the shelf and both the oxygen minimum zone (OMZ) on the upper slope (~ 200–1300 m) and the seasonal hypoxic zone that appears on the shelf. Source indices showed mixed marine and terrigenous OM within the estuaries, but consistent predominance (80–100%) of marine OM on the shelf and slope. Thus, riverine terrigenous OM is diluted or replaced by autochthonous marine OM and/or is efficiently re-mineralised, within or immediately offshore of the estuaries. Organic C contents of surface shelf sediments varied from < 0.5 wt% in relict shelf sands to up to ~ 4 wt% for nearshore muds, while upper slope sites within the OMZ showed a wide range (~ 2 to 7 + wt%), progressively decreasing below the OMZ to ≤ 1 wt% at 2000 m. Thus, major variability (~ 5 wt%) was found at slope sites within the OMZ of similar depth and near-identical bottom-water O2 concentrations. A strong relationship between %Corg and sediment grain size was seen for sediments within the OMZ, but lower relative Corg contents were found for sites on the shelf and below the OMZ. Further, Corg loadings, when related to estimated sediment surface area, indicated distinct enrichment of Corg in the OMZ sediments relative to sites above and below the OMZ and to sediments from normoxic margins. Diagenetic indices confirmed that lower Corg content below the OMZ is associated with more extensive OM degradation, but that shelf sediment OM is not consistently more degraded than that found within the OMZ. Together, the results indicate that OM distribution across the margin is controlled by interplay between hydrodynamic processes and varying preservation associated with O2 availability. This inference is supported by multiple regression analysis. Hydrodynamic processes (expressed as %Silt) followed by O2 availability, can explain the large majority of %Corg variability when the shelf and slope are considered as a whole. However, while O2 becomes the primary influence on %Corg for sediments below the OMZ, %Silt is the primary influence across the OMZ and, apparently, the shelf. Thus, reduced O2 exposure is responsible for OM enrichment within the OMZ, but hydrodynamic processes are the overriding control on sediment OM distributions across both the shelf and the OMZ.

Benthic nitrogen fluxes and fractionation of nitrate in the Mauritanian oxygen minimum zone (Eastern Tropical North Atlantic)

We present sedimentary geochemical data and in situ benthic flux measurements of dissolved inorganic nitrogen (DIN: NO3−, NO2−, NH4+) and oxygen (O2) from 7 sites with variable sand content along 18°N offshore Mauritania (NW Africa). Bottom water O2 concentrations at the shallowest station were hypoxic (42μM) and increased to 125μM at the deepest site (1113m). Total oxygen uptake rates were highest on the shelf (−10.3mmolO2m−2d−1) and decreased quasi-exponentially with water depth to −3.2mmolO2m−2d−1. Average denitrification rates estimated from a flux balance decreased with water depth from 2.2 to 0.2mmolNm−2d−1. Overall, the sediments acted as net sink for DIN. Observed increases in δ15NNO3 and δ18ONO3 in the benthic chamber deployed on the shelf, characterized by muddy sand, were used to calculate apparent benthic nitrate fractionation factors of 8.0‰ (15εapp) and 14.1‰ (18εapp). Measurements of δ15NNO2 further demonstrated that the sediments acted as a source of 15N depleted NO2−. These observations were analyzed using an isotope box model that considered denitrification and nitrification of NH4+ and NO2−. The principal findings were that (i) net benthic 14N/15N fractionation (εDEN) was 12.9±1.7‰, (ii) inverse fractionation during nitrite oxidation leads to an efflux of isotopically light NO2− (−22±1.9‰), and (iii) direct coupling between nitrification and denitrification in the sediment is negligible. Previously reported εDEN for fine-grained sediments are much lower (4–8‰). We speculate that high benthic nitrate fractionation is driven by a combination of enhanced porewater–seawater exchange in permeable sediments and the hypoxic, high productivity environment. Although not without uncertainties, the results presented could have important implications for understanding the current state of the marine N cycle.

Simple transfer functions for calculating benthic fixed nitrogen losses and C:N:P regeneration ratios in global biogeochemical models

Empirical transfer functions are derived for predicting the total benthic nitrate loss (LNO3) and the net loss of dissolved inorganic nitrogen (LDIN) in marine sediments, equivalent to sedimentary denitrification. The functions are dynamic vertically integrated sediment models which require the rain rate of particulate organic carbon to the seafloor (RRPOC) and a proposed new variable (O2‐NO3)bw (bottom water O2 concentration minus NO3− concentration) as the only input parameters. Applied globally to maps of RRPOC and (O2‐NO3)bw on a 1° × 1° spatial resolution, the models predict a NO3− drawdown of 196 Tg yr−1 (LNO3) of which 153 – 155 Tg yr−1 is denitrified to N2 (LDIN). This is in good agreement with previous estimates using very different methods. Our approach implicitly accounts for fixed N loss via anammox, such that our findings do not support the idea that the relatively recent discovery of anammox in marine sediments might require current estimates of the global benthic marine N budget to be revised. The continental shelf (0 – 200 m) accounts for >50% of global LNO3 and LDIN, with slope (200 – 2000 m) and deep‐sea (>2000 m) sediments contributing ca. 30% and 20%, respectively. Denitrification in high‐nitrate/low‐oxygen regions such as oxygen minimum zones is significant (ca. 15 Tg N yr−1; 10% of global) despite covering only ∼1% of the seafloor. The data are used to estimate the net fluxes of nitrate (18 Tg N yr−1) and phosphate (27 Tg P yr−1) across the sediment‐water interface. The benthic fluxes strongly deviate from Redfield composition, with globally averaged N:P, N:C and C:P values of 8.3, 0.067 and 122, respectively, indicating world‐wide fixed N losses (by denitrification) relative to C and P. The transfer functions are designed to be coupled dynamically to general circulation models to better predict the feedback of sediments on pelagic nutrient cycling and dissolved O2 distributions.

Sediment-water fluxes of dissolved inorganic carbon, O2, nutrients, and N2 from the hypoxic region of the Louisiana continental shelf

Globally, hypoxic areas (<63 mmol O2 m−3) in coastal waters are increasing in number and spatial extent. One of the largest coastal hypoxic regions has been observed during the summer in the bottom-water of the Louisiana continental shelf. The shelf receives the sediments, organic matter, and nutrients exported from the Mississippi River watershed, and much of this material is ultimately deposited to the sea floor. Hence, quantifying the rates of sediment-water dissolved inorganic carbon (DIC), oxygen (O2), and nutrient fluxes is important for understanding how these processes relate to the development and maintenance of hypoxia. In this study, the sediment-water fluxes of DIC, O2, nutrients, and N2 (denitrification) were measured on the Louisiana shelf during six cruises from 2005 to 2007. On each cruise, three to four sites were occupied in or directly adjacent to the region of the shelf that experiences hypoxia. DIC fluxes, a proxy for total sediment respiration, ranged from 7.9 to 21.4 mmol m−2 day−1 but did not vary significantly either spatially or as a function of bottom-water O2 concentration. Overall, sediment respiration and nutrient flux rates were small in comparison to water-column respiration and phytoplankton nutrient demand. Nitrate fluxes were correlated with bottom-water O2 concentrations (r = 0.69), and there was evidence that decreasing O2 concentrations inhibited coupled nitrification-denitrification. Denitrification rates averaged 1.4 mmol N m−2 day−1. Scaled to the area of the shelf, the denitrification sink represented approximately 39% of the N load from the Mississippi River watershed. The sediment-water fluxes reported from this study add substantial information on the spatial and temporal patterns in carbon, O2, and nutrient cycling available for the Louisiana continental shelf and, thus, improve the understanding of this system.

Bottom-water Hypoxia Effects on Sediment–Water Interface Nitrogen Transformations in a Seasonally Hypoxic, Shallow Bay (Corpus Christi Bay, TX, USA)

Bottom-water hypoxia effects on sediment–water interface nitrogen (N) transformations in Corpus Christi Bay (TX, USA) were examined using continuous-flow intact sediment core incubations. Sediment cores were collected from three sites in August 2002 (summer hypoxia) and April 2003 (normoxia). Oxygen (O2) and hydrogen sulfide (H2S) depth profiles were generated with microelectrodes. Membrane inlet mass spectrometry was used to measure sediment O2 demand and net N2 flux and combined with isotope pairing to determine potential denitrification and N fixation. Potential dissimilatory nitrate reduction to ammonium (DNRA) was measured using high-performance liquid chromatography. Sediment O2 penetration depths ranged from 5 to 10 mm. H2S ranged from being present in overlying water and throughout the sediment column in August to not detectable in overlying water or sediment in April. Sediment O2 demand was higher during bottom-water normoxia conditions versus hypoxia. Sediments were a significant source of \({\text{NH}}_{\text{4}}^{\text{ + }} \) to overlying water during hypoxia but not during normoxia. Net N2 fixation was observed at one station in August and all stations in April. Denitrification rates were significantly higher during hypoxia at two of three sites. Potential DNRA was observed during both oxic states, but rates were significantly higher during hypoxia, which may reflect sulfide enhancement and absence of cation exchange with \(^{{\text{14}}} {\text{NH}}_{\text{4}}^{\text{ + }} \). DNRA may contribute to formation and maintenance of bottom-water hypoxic events in this system. These results show that N transformation pathways and rates change when bottom-water O2 concentrations drop to hypoxic levels. Since south Texas is a semiarid region with few episodic runoff events, these results indicate that Corpus Christi Bay sediments are a N source most of the year, and denitrification may drive N limitation between episodic runoff events.

Seasonal dynamics of benthic O2 uptake in a semienclosed bay: Importance of diffusion and faunal activity

The benthic O2 uptake and the O2 microdistribution in a coastal sediment of Aarhus Bay, Denmark, were investigated during a seasonal study. Measurements were performed in situ by a profiling lander and a flux chamber lander, as well as on recovered sediment cores. The O2 penetration depth, the diffusive O2 uptake, and the volumespecific O2 consumption rate strongly depended on the seasonal changes in bottom water O2 concentration and the sedimentation of organic carbon. The in situ O2 penetration depth varied between 0.5 mm in summer and 4.5 mm in winter. The diffusive O2 uptake varied between 8 and 30 mmol m−2 d−1, whereas the volume‐specific O2 consumption rate varied by a factor of 13. The O2 distribution was very sensitive to environmental controls, and microprofiles obtained in the laboratory tended to overestimate the in situ O2 penetration depths and underestimate the in situ diffusive O2 uptake. Three‐dimensional O2 flux calculations based on in situ microtopographic mapping showed that the actual diffusive exchange rate was ~10% higher than the simple one‐dimensional, microprofilederived diffusive O2 exchange. The total O2 uptake measured in the laboratory showed less distinct seasonal variation, but on the average, it was ~20% higher than the diffusive O2 uptake. The difference reflected the microtopography of the sediment surface and the contribution from benthic macrofauna. In situ total O2uptake was generally twice as high as laboratory rates, reflecting a higher fauna‐related O2 consumption in the larger enclosures incubated in situ. Annually, the in situ three‐dimensional diffusive O2 consumption was 6.2 mol O2 m−2, whereas the additional benthos‐mediated O2 uptake was 3.9 mol O2 m−2. Thus, 40% of the total O2 uptake was due to faunal activity and respiration. The present study demonstrates the importance of realistic faunal representation during sediment incubations in order to obtain correct benthic mineralization rates.

Factors controlling the burial of organic carbon in laminated and bioturbated sediments off NW Mexico: implications for hydrocarbon preservation

Factors controlling the burial of organic carbon (OC) in Late Quaternary sediments on the NW Mexican continental margin are assessed using a suite of box and piston cores strategically located on the shelf-slope rise with respect to the intense oxygen minimum in this region. An OC concentration maximum occurs on the mid-slope, below the core of an intense water-column O2 minimum, due to current winnowing on the outer shelf, the preferential accumulation of organic matter in fine-grained deposits, and the offshore decrease in the settling flux of organic detritus. The organic matter at all water depths is overwhelmingly marine. Hydrogen indices (HI) are higher on the slope (>300 mg HC/g TOC) than on the shelf (<300 mg HC/g TOC), where current winnowing has promoted organic matter degradation, but there is no difference in HI in slope sediments accumulating under well oxygenated and O2-deficient conditions. The degree of winnowing appears to be the primary factor affecting the preservational quality of organic matter deposited on this margin.Rates of accumulation of OC and opal are all higher in the interglacial intervals when compared with the glacial deposits over the last 140,000 yr. However, matrix-corrected HI values in the mid- and lower-slope cores are invariant and are similar to values in the laminated intervals from the oxygen-minimum site. Thus, cyclic changes in organic carbon accumulation on this margin have been controlled by production variations rather than differential preservation. HI values in Late Quaternary sediments from several continental margins, including NW Mexico, and euxinic basins correspond to type II kerogen, irrespective of bottom water O2 concentrations. Therefore, the preservation of oil-prone kerogen in productive margin settings does not appear to be restricted to sediments deposited under conditions of low bottom water O2 concentrations as envisioned in models of petroleum source-rock deposition.