Bond Activation Pathway Research Articles

Selective [3 + 2] C-H/C-H Alkyne Annulation via Dual (Distal) C(β,δ)-H Bond Activation Relay: A Novel Therapeutic Quinazolone-Tethered Benzofulvenes for Oral Cancer.

In contrast to proximal C-H bond activations, distal C-H bond activation is fundamentally more challenging and requires distinctly specialized directing partners or techniques. In this context, we report an unprecedented dual (distal) β-C(benzylic)-H and δ-C(aryl)-H bond activation relay protocol for the chemo-, regio-, and stereoselective construction of heterocycle-tethered benzofulvenes via [3 + 2] CH/CH-alkyne annulation under palladium catalysis. The protocol overrides the more favorable [4 + 2] CH/NH annulation and does not follow the vinylic C-H bond activation pathway. Mechanistic studies provide insight into the favored cyclopalladation of key intermediates (resulting from β-C(benzylic)-H bond cleavage) through relay δ-C(aryl)-H cleavage (vs N-H cleavage) prior to reductive elimination, which is the key to desired annulation. The synthesized new chemical entities (NCEs) constitute a novel scaffold with favorable anticancer activity against oral squamous cell carcinoma (OSCC). Detailed biomolecular studies, including RNA-sequencing and analysis, indicate that these compounds (4e and 4w) arrest the cell cycle at the S-phase and target multiple cancer hallmarks, such as the activation of apoptotic pathways and impairment of mitochondrial activity simultaneously, suggesting their chemotherapeutic potential for oral cancer by addressing the complexity and adaptability of cancer cells in chorus.

Deciphering complexity in Pd–catalyzed cross-couplings

Understanding complex reaction systems is critical in chemistry. While synthetic methods for selective formation of products are sought after, oftentimes it is the full reaction signature, i.e., complete profile of products/side-products, that informs mechanistic rationale and accelerates discovery chemistry. Here, we report a methodology using high-throughput experimentation and multivariate data analysis to examine the full signature of one of the most complicated chemical reactions catalyzed by palladium known in the chemical literature. A model Pd-catalyzed reaction was selected involving functionalization of 2-bromo-N-phenylbenzamide and multiple bond activation pathways. Principal component analysis, correspondence analysis and heatmaps with hierarchical clustering reveal the factors contributing to the variance in product distributions and show associations between solvents and reaction products. Using robust data from experiments performed with eight solvents, for four different reaction times at five different temperatures, we correlate side-products to a major dominant N-phenyl phenanthridinone product, and many other side products.

Expanding the Scope of Aluminum Chemistry with Noninnocent Ligands.

ConspectusAluminum is the most abundant metal in the earth's crust at 8%, and it is also widely available domestically in many countries worldwide, which ensures a stable supply chain. To further the applications of aluminum (Al), such as in catalysis and electronic and energy storage materials, there has been significant interest in the synthesis and characterization of new Al coordination compounds that can support electron transfer (ET) and proton transfer (PT) chemistry. This has been achieved using redox and chemically noninnocent ligands (NILs) combined with the highly stable M(III) oxidation state of Al and in some cases the heavier group 13 ions, Ga and In.When ligands participate in redox chemistry or facilitate the breaking or making of new bonds, they are often termed redox or chemically noninnocent, respectively. Al(III) in particular supports rich ligand-based redox chemistry because it is so redox inert and will support the ligand across many charge and protonation states without entering into the reaction chemistry. To a lesser extent, we have reported on the heavier group 13 elements Ga and In, and this chemistry will also be included in this Account, where available.This Account is arranged into two technical sections, which are (1) Structures of Al-NIL complexes and (2) Reactivity of Al-NIL complexes. Highlights of the research work include reversible redox chemistry that has been enabled by ligand design to shut down radical coupling pathways and to prevent loss of H2 from unsaturated ligand sites. These reversible redox properties have in turn enabled the characterization of Class III electron delocalization through Al when two NIL are bound to the Al(III) in different charge states. Characterization of the metalloaromatic character of square planar Al and Ga complexes has been achieved, and characterization of the delocalized electronic structures has provided a model within which to understand and predict the ET and PT chemistry of the NIL group 13 compounds. The capacity of Al-NIL complexes to perform ET and PT has been employed in reactions that use ET or PT reactivity only or in reactions where coupled ET/PT affords hydride transfer chemistry. As an example, ligand-based PT reactions initiate metal-ligand cooperative bond activation pathways for catalysis: this includes acceptorless dehydrogenation of formic acid and anilines and transfer hydrogenation chemistry. In a complementary approach, ligand based ET/PT chemistry has been used in the study of dihydropyridinate (DHP-) chemistry where it was shown that N-coordination of group 13 ions lowers kinetic barriers to DHP- formation. Taken together, the discussion presented herein illustrates that the NIL chemistry of Al(III), and also of Ga(III) and In(III) holds promise for further developments in catalysis and energy storage.

Rapid Polyolefin Hydrogenolysis by a Single-Site Organo-Tantalum Catalyst on a Super-Acidic Support: Structure and Mechanism.

The novel electrophilic organo-tantalum catalyst AlS/TaNpx (1) (Np=neopentyl) is prepared by chemisorption of the alkylidene Np3 Ta=CHt Bu onto highly Brønsted acidic sulfated alumina (AlS). The proposed catalyst structure is supported by EXAFS, XANES, ICP, DRIFTS, elemental analysis, and SSNMR measurements and is in good agreement with DFT analysis. Catalyst 1 is highly effective for the hydrogenolysis of diverse linear and branched hydrocarbons, ranging from C2 to polyolefins. To the best of our knowledge, 1 exhibits one of the highest polyolefin hydrogenolysis activities (9,800 (CH2 units) ⋅ mol(Ta)-1 ⋅ h-1 at 200 °C/17 atm H2 ) reported to date in the peer-reviewed literature. Unlike the AlS/ZrNp2 analog, the Ta catalyst is more thermally stable and offers multiple potential C-C bond activation pathways. For hydrogenolysis, AlS/TaNpx is effective for a wide variety of pre- and post-consumer polyolefin plastics and is not significantly deactivated by standard polyolefin additives at typical industrial concentrations.

Rapid Polyolefin Hydrogenolysis by a Single‐Site Organo‐Tantalum Catalyst on a Super‐Acidic Support: Structure and Mechanism

AbstractThe novel electrophilic organo‐tantalum catalyst AlS/TaNpx (1) (Np=neopentyl) is prepared by chemisorption of the alkylidene Np3Ta=CHtBu onto highly Brønsted acidic sulfated alumina (AlS). The proposed catalyst structure is supported by EXAFS, XANES, ICP, DRIFTS, elemental analysis, and SSNMR measurements and is in good agreement with DFT analysis. Catalyst 1 is highly effective for the hydrogenolysis of diverse linear and branched hydrocarbons, ranging from C2 to polyolefins. To the best of our knowledge, 1 exhibits one of the highest polyolefin hydrogenolysis activities (9,800 (CH2 units) ⋅ mol(Ta)−1 ⋅ h−1 at 200 °C/17 atm H2) reported to date in the peer‐reviewed literature. Unlike the AlS/ZrNp2 analog, the Ta catalyst is more thermally stable and offers multiple potential C−C bond activation pathways. For hydrogenolysis, AlS/TaNpx is effective for a wide variety of pre‐ and post‐consumer polyolefin plastics and is not significantly deactivated by standard polyolefin additives at typical industrial concentrations.

Binding Small Molecules to a cis-Dicarbonyl 99TcI-PNP Complex via Metal–Ligand Cooperativity

Metal-ligand cooperativity is a powerful tool for the activation of various bonds but has rarely, if ever, been studied with the radioactive transition metal 99Tc. In this work, we explore this bond activation pathway with the dearomatized PNP complex cis-[99TcI(PyrPNPtBu*)(CO)2] (4), which was synthesized by deprotonation of trans-[99TcI(PyrPNPtBu)(CO)2Cl] with KOtBu. Analogous to its rhenium congener, the dearomatized compound reacts with CO2 to form the carboxy complex cis-[99TcI(PyrPNPtBu-COO)(CO)2] and with H2 to form the mono-hydride complex cis-[99TcI(PyrPNPtBu)(CO)2H] (7). Substrates with weakly acidic protons are deprotonated by the Brønsted basic pincer backbone of 4, yielding a variety of intriguing complexes. Reactions with terminal alkynes enable the isolation of acetylide complexes. The deprotonation of an imidazolium salt results in the in situ formation and coordination of a carbene ligand. Furthermore, a study with heterocyclic substrates allowed for the isolation of pyrrolide and pyrazolide complexes, which is uncommon for Tc. The spectroscopic analyses and their solid-state structures are reported.

Computational Screening of Supported Metal Oxide Nanoclusters for Methane Activation: Insights into Homolytic versus Heterolytic C–H Bond Dissociation

Since its discovery in zeolites, the [CuOCu]2+ motif has played an important role in our understanding of selective methane activation over supported metal oxide nanoclusters. Although there are two known C-H bond dissociation mechanisms, namely, homolytic and heterolytic cleavage, most computational studies on optimizing metal oxide nanoclusters for improved methane activation reactivity have focused only on the homolytic mechanism. In this work, both mechanisms were examined for a set of 21 mixed metal oxide complexes of the form of [M1OM2]2+ (M1 and M2 = Mn, Fe, Co, Ni, Cu, and Zn). Except for pure copper, heterolytic cleavage was found to be the dominant C-H bond activation pathway for all systems. Furthermore, mixed systems including [CuOMn]2+, [CuONi]2+, and [CuOZn]2+ are predicted to possess methane activation activity similar to pure [CuOCu]2+. These results suggest that both homolytic and heterolytic mechanisms should be considered in computing methane activation energies on supported metal oxide nanoclusters.

Regulating the C–H Bond Activation Pathway over ZrO2 via Doping Engineering for Propane Dehydrogenation

The efficient activation of the C–H bond in light alkanes and their catalyst design are significant for alkane-related catalytic processes in view of theoretical and practical aspects. Here, we report the C–H bond activation mechanism and structure–reactivity relationships of Ga-doped ZrO2 catalysts in propane dehydrogenation. Experimental and theoretical calculation results suggest that the introduction of Ga into the framework of ZrO2 alters the C–H bond activation pathway from a stepwise mechanism to a concerted mechanism involving simultaneous cleavage of two C–H bonds in propane, leading to a superior C–H bond activation ability and a lower reaction barrier than state-of-the-art metal oxide catalysts. In addition, a volcano-type dependence of the rate of propene formation on the Ga/Zr ratio is established due to a compromise of intrinsic activity and active site concentration. The strategy of metal incorporation into bulk metal oxide may provide an alternative solution to control the C–H bond activation pathway for efficient propene production.

Pd-Catalyzed Asymmetric Oxidative C-H/C-H Cross-Coupling Reaction between Ferrocenes and Azoles.

The asymmetric C-H bond functionalization reaction is one of the most efficient and straightforward methods for the synthesis of optically active molecules. Herein, our work discovered a Pd-catalyzed asymmetric oxidative C-H/C-H cross-coupling reaction of ferrocenes with azoles such as oxazoles and thiazoles. Mono-N-protected amino acid as chiral ligands with palladium(II) has been demonstrated as an effective catalytic system in a weakly azine-directed asymmetric C-H bond functionalization reaction. This method offers a powerful strategy for constructing various substituted planar chiral ferrocenes via a dual C-H bond activation pathway in medium yields (up to 70%) with good enantioselectivity (up to 95.3:4.7 er) under mild conditions.

Pd(II)-Catalyzed Azine-Assisted Enantioselective Oxidative C-H/C-H Cross-Coupling of Ferrocenes with Various Heteroarenes.

A palladium(II)-catalyzed enantioselective oxidative cross-coupling of ferrocenes with heteroarenes is described. Mono-N-protected amino acids can be used as sources of chirality. With azine as an efficient directing group, various substituted planar chiral ferrocenes were obtained via a dual C-H bond activation pathway in medium yields (up to 72%) with good enantioselectivity (up to 89.4:10.6 er) under mild conditions.

Contrasting E-H Bond Activation Pathways of a Phosphanyl-Phosphagallene.

The reactivity of the phosphanyl‐phosphagallene, [H2C{N(Dipp)}]2PP=Ga(Nacnac) (Nacnac=HC[C(Me)N(Dipp)]2; Dipp=2,6‐ i Pr2C6H3) towards a series of reagents possessing E−H bonds (primary amines, ammonia, water, phenylacetylene, phenylphosphine, and phenylsilane) is reported. Two contrasting reaction pathways are observed, determined by the polarity of the E−H bonds of the substrates. In the case of protic reagents (δ−E−Hδ+), a frustrated Lewis pair type of mechanism is operational at room temperature, in which the gallium metal centre acts as a Lewis acid and the pendant phosphanyl moiety deprotonates the substrates. Interestingly, at elevated temperatures both NH2 i Pr and ammonia can react via a second, higher energy, pathway resulting in the hydroamination of the Ga=P bond. By contrast, with hydridic reagents (δ+E−Hδ−), such as phenylsilane, hydroelementation of the Ga=P bond is exclusively observed, in line with the polarisation of the Si−H and Ga=P bonds.

Contrasting E−H Bond Activation Pathways of a Phosphanyl‐Phosphagallene

AbstractThe reactivity of the phosphanyl‐phosphagallene, [H2C{N(Dipp)}]2PP=Ga(Nacnac) (Nacnac=HC[C(Me)N(Dipp)]2; Dipp=2,6‐iPr2C6H3) towards a series of reagents possessing E−H bonds (primary amines, ammonia, water, phenylacetylene, phenylphosphine, and phenylsilane) is reported. Two contrasting reaction pathways are observed, determined by the polarity of the E−H bonds of the substrates. In the case of protic reagents (δ−E−Hδ+), a frustrated Lewis pair type of mechanism is operational at room temperature, in which the gallium metal centre acts as a Lewis acid and the pendant phosphanyl moiety deprotonates the substrates. Interestingly, at elevated temperatures both NH2iPr and ammonia can react via a second, higher energy, pathway resulting in the hydroamination of the Ga=P bond. By contrast, with hydridic reagents (δ+E−Hδ−), such as phenylsilane, hydroelementation of the Ga=P bond is exclusively observed, in line with the polarisation of the Si−H and Ga=P bonds.

C-H Bond Functionalization of (Hetero)aryl Bromide Enabled Synthesis of Brominated Biaryl Compounds.

Aryl bromide is one of the most important compounds in organic chemistry, because it is widely used as synthetic building blocks enabling quick access to a wide array of bioactive molecules, organic materials, and polymers via the versatile cutting-edge transformations of C-Br bond. Direct C-H bond functionalization of aryl bromide is considered to be an efficient way to prepare functionalized aryl bromides; however, it is rarely explored possibly due to the relatively low reactivity of aryl bromide toward C-H bond activation. We herein report a palladium-catalyzed coupling reaction between aryl iodide and aryl bromide for preparing brominated biaryl compounds via a silver-mediated C-H bond activation pathway.

Hydrogenation and C[sbnd]S bond activation pathways in thiophene and tetrahydrothiophene reactions on sulfur-passivated surfaces of Ru, Pt, and Re nanoparticles

Thiophene-H2 reactions proceed via sulfur removal and hydrogenation routes on dispersed metal nanoparticles that become decorated by refractory S adlayers during catalysis. The identity and kinetic relevance of the required elementary steps are described here based on rates measured at S-chemical potentials set by H2S/H2 ratios similar to those prevalent during practical catalysis on Re, ReSx, Ru, and Pt catalysts. The free energies of formation of S adatoms from H2S/H2 reactants are large and negative at low coverages (< −50 kJ mol−1 on Pt(111) and < −150 kJ mol−1 on Re(0001) and Ru(0001)), but strong repulsion among adatoms prevents full saturation, leading to sub-monolayer coverages and to passivated surfaces that expose uncovered interstices. The residual interstitial spaces (*) within adlayers of unreactive S-atoms (S′) bind intermediates and transition states reversibly, thus allowing these passivated surfaces to carry out catalytic turnovers. These interstices are larger on Pt than on Ru or Re surfaces, leading to concomitantly higher turnover rates for thiophene hydrogenation and desulfurization routes. The identity and kinetic relevance of elementary steps for desulfurization (to form C4 hydrocarbons) and hydrogenation (to form tetrahydrothiophene; THT) are similar among these catalysts; they involve kinetically-relevant H-addition steps of thiophene-derived intermediates that cleave their CS bonds or “over-hydrogenate” to THT in one surface sojourn. THT undergoes CS bond cleavage in secondary reactions that correct this over-hydrogenation to form the more unsaturated species that cleave CS bonds. THT/C4 product ratios are insensitive to H2S/H2 ratios and thiophene pressure, even though active interstitial spaces are covered by kinetically-detectable S* and bound thiophene; therefore, primary and secondary reactions must occur on the same active ensembles. The observed increase in THT/C4 ratios with H2 pressure shows that THT formation transition states involve a larger number of H-atoms than for CS cleavage. CS bonds cleave in species with partial unsaturation (H-contents between those in THT and thiophene), in processes that are reminiscent of the requirement to add or remove H-atoms from C and O atoms in cleaving CC and CO bonds in alkanes and alkanols, as well as CO bonds in CO hydrogenation reactions. The rate and selectivity data and the mechanistic conclusions described here show that thiophene hydrogenation and desulfurization routes require similar binding interstices within refractory S adlayers and that metal-sulfur bond energies act as indirect descriptors of reactivity because they determine the number, size, and binding properties of the exposed weakly-binding ensembles that stabilize the relevant transition states and enable catalytic turnovers.

Imidazole-aryl coupling reaction via C[sbnd]H bond activation catalyzed by palladium supported on modified magnetic reduced graphene oxide in alkaline deep eutectic solvent

Abstract By employing reusable heterogeneous catalyst, modified magnetic reduced graphene oxide-supported palladium catalyst (MRGO@ DAP- AO-Pdll), the regioselective C-5 arylation of imidazoles via C H bond activation pathway for the preparation of C5-arylated imidazoles has been successfully achieved in alkaline deep eutectic solvent made of potassium carbonate and glycerol under aerobic conditions. Compared to previous procedures, significant improvements of this new protocol demonstrated by the high catalytic efficiency, easy recovery of catalyst, broad substrate scope and sustainable reaction condition using green solvent.

Cyclic(alkyl)(amino) Carbene-Promoted Ring Expansion of a Carbodicarbene Beryllacycle.

Recent synthetic efforts have uncovered several bond activation pathways mediated by beryllium. Having the highest charge density and electronegativity, the chemistry of beryllium often diverges from that of its heavier alkaline earth metal congeners. Herein, we report the synthesis of a new carbodicarbene beryllacycle (2). Compound 2 converts to 3 via an unprecedented cyclic(alkyl)(amino) carbene (CAAC)-promoted ring expansion reaction (RER). While CAAC activates a carbon-beryllium bond, N-heterocyclic carbene (NHC) coordinates to beryllium to give the tetracoordinate complex 4, which contains the longest carbeneC-Be bond to date at 1.856(4) Å. All of the compounds were fully characterized by X-ray crystallography, Fourier transform infrared spectroscopy, and 1H, 13C, and 9Be NMR spectroscopy. The ring expansion mechanism was modeled with both NHC and CAAC using density functional theory calculations. While the activation energy for the observed beryllium ring expansion with CAAC was found to be 14 kJ mol-1, the energy barrier for the hypothetical NHC RER is significantly higher (199.1 kJ mol-1).

A Systematic Study on Bond Activation Energies of NO, N2, and O2 on Hexamers of Eight Transition Metals

AbstractCatalytic bond activation pathways of diatomic molecules on small metal clusters have been studied by density functional theory calculations. The focus of this study is dissociation of NO, N2, and O2 on hexamers of eight transition metals (Ni, Cu, Rh, Pd, Ag, Ir, Pt, and Au). For all the 24 cases, the lowest energy structures at the molecular‐adsorption state, bond dissociation transition state (TS), and dissociative‐adsorption state were identified by a systematic procedure. At TS of 20 cases, the transition metal hexamer moiety took a different shape from bare transition metal hexamers. The results support the importance of metastable cluster structures in catalytic activity, recently proposed in several catalytic systems. Furthermore, using the obtained dataset, a simple linear regression analysis was made to explore the applicability of the Brønsted‐Evans‐Polanyi principle to flexible metal cluster catalysts.

Palladium-Catalyzed Synthesis of Diaryl Ketones from Aldehydes and (Hetero)Aryl Halides via C–H Bond Activation

We developed a palladium-catalyzed C–H transformation that enabled the synthesis of ketones from aldehydes and (hetero)aryl halides. The use of picolinamide ligands was key to achieving the transformation. Heteroaryl ketones, as well as diaryl ketones, were synthesized in good to excellent yields, even in gram-scale, using this reaction. Results of density functional theory (DFT) calculations support the C–H bond activation pathway.

Computational Studies on the Mechanism of Rh‐Catalyzed Decarbonylative [5+2–1] Reaction between Isatins and Alkynes: High Selectivity by Directing Group

DFT calculations are used to investigate the mechanism and regioselectivity of Rh‐catalyzed decarbonylative [5+2–1] cycloaddition reaction between isatins and alkynes. Computational calculations provide mechanistic insights into C–C and C–H bond cleavage pathways leading to the two products observed experimentally: (1) the C–C bond cleavage pathway involves four steps including decarbonylation, alkyne insertion, and reductive elimination to complete the C–C bond activation cycle. Alkyne insertion is the rate‐determining step for the favorable C–C bond‐activation pathway. (2) Three steps, namely C–H bond cleavage, alkyne insertion, and reductive elimination, are essential for the C–H bond‐cleavage pathway and the alkyne insertion process is also the rate‐determining step. The results of our calculations are consistent with the experimentally observed major product from C–C bond activation for both 3‐methyl‐2‐pyridyl and 2‐pyridyl as directing groups in the reactants, with the former directing group leading to higher product selectivity than obtained with the latter. The origin of the regioselectivity of alkyne insertion is revealed by a distortion/interaction model. The results reveal that the regioselectivity is mainly controlled by the interaction energies.

Synthesis, structures, and reactivity studies of cyclometalated N-heterocyclic carbene complexes of ruthenium.

An unusual cyclometalation reaction results from a C-C bond activation in Cp*(IPr)RuCl to give Cp*(IPr')Ru(L) featuring a NHC-C(sp2) chelating ligand (5-L; L = propene, N2; IPr = 1,3-bis(2,6-diisopropylphenyl)imidazol-2-ylidene; IPr' = 1-(6-isopropylphenyl)-3-(2,6-diisopropylphenyl)imidazol-2-ylidene). DFT calculations were employed to elucidate the C-C bond activation pathway. Reactions of cyclometalated ruthenium complexes bearing NHC-C(sp2) and NHC-C(sp3) ligands (5-L and Cp*(IXy-H)Ru(N2), 1a, respectively where IXy = 1,3-bis(2,6-dimethylphenyl)-imidazol-2-ylidene; IXy-H is the deprotonated form of (IXy)) are reported. Deprotonation of 1a by an equimolar mixture of benzyl potassium and 18-crown-6 afforded a doubly-cyclometalated complex [Cp*(IXy-2H)Ru][K(18-crown-6)] (7). A lower CO stretching frequency in Cp*(IXy-H)Ru(CO) (8) vs. Cp*(IPr')Ru(CO) (9) suggests that the NHC-C(sp3) ligand is more electron donating. Complexes 5-L reacted with H2 to give the dihydride Cp*(IPr')RuH2 (11). In comparison, after an initial oxidative addition of H2, complex 1a with its more reactive Ru-C(sp3) bond underwent C-H bond reductive elimination, and a second oxidative addition of H2 afforded the trihydride Cp*(IXy)RuH3 (10). Reaction of 1a with B(C6F5)3 resulted in a zwitterionic complex Cp*Ru(IXy'') (12; IXy'' = 1-[2-((C6F5)3BCH2)C6H3-6-methyl]-3-(2,6-dimethylphenyl)imidazol-2-ylidene-1-yl) by the formation of a new C-B bond. In contrast, B(C6F5)3 abstracted a hydride from 5-L and promoted a very unusual C-C bond formation involving insertion of an allyl ligand into a Ru-C bond to form [Cp*Ru(IPr'')][HB(C6F5)3] (IPr'' = 1-[2-(CH2[double bond, length as m-dash]CHCH2)C6H3-6-isopropyl]-3-(2,6-diisopropyl)imidazol-2-ylidene-1-yl) (13).