Lipophrys Pholis Research Articles

Artificial rockpools create habitat refugia on seawalls at high tide

Rockpools are fundamental habitats on natural rocky shores that provide refugia for marine life at low and high tide. Yet, artificial coastal structures lack the topographical complexity seen in these natural habitats. Eco-engineering, that may include the deployment of artificial rockpools, attempts to address the lack of suitable habitat on coastal infrastructure but most studies focus on species abundance metrics at low tide. It is important to understand how eco-engineering interventions may provide habitat at high tide compared to the surrounding artificial substrate.In this study, we demonstrate how groups of rockpools (1, 3 or 5 rockpools) add habitat complexity at high tide to a concrete seawall in Poole Harbour, UK. Between April and October 2022, eighteen GoPro cameras were deployed to record species richness and abundance in artificial rockpools and the adjacent concrete sea wall. Additionally, the length of time the most abundant fauna (the shanny fish Lipophrys pholis and the European shore crab Carcinus maenas) spent engaging in different behaviour (resting, feeding, moving) was recorded.Overall, there was no significant difference in the abundance and species richness of mobile fauna using the artificial rockpools versus the seawall. However, both the shanny and shore crab generally spent more time in the rockpools than on the seawall. Both crabs and shanny preferentially engaged in feeding behaviours on the seawall, which has been attributed to the high percentage cover of barnacle prey. Crabs and shanny spent more time resting in the rockpools than the seawall and the only reproductive behaviour observed occurred within the rockpools. Our work suggests that artificial rockpools support the habitat needs and multiple life history requirements of these species at high tide. Both the seawall and rockpools provide valuable resources, which further emphasises the need for variety in eco-engineering feature designs.

A comparative study of tissue protein synthesis rates in an Antarctic, Harpagifer antarcticus and a temperate, Lipophrys pholis teleost

The affect of temperature on tissue protein synthesis rates has been reported in temperate and tropical, but not Antarctic fishes. Previous studies have generally demonstrated low growth rates in Antarctic fish species in comparison to temperate relatives and elevated levels of protein turnover. This study investigates how low temperatures effect tissue protein synthesis and hence tissue growth in a polar fish species. Groups of Antarctic, Harpagifer antarcticus and temperate, Lipophrys pholis, were acclimated to a range of overlapping water temperatures and protein synthesis was measure in white muscle (WM), liver and gastrointestinal tract (GIT). WM protein synthesis rates increased linearly with temperature in both species (H. antarcticus 0.16–0.23%.d−1, L. pholis, 0.31–0.76%.d−1), while liver (H. antarcticus 0.24–0.27%.d−1, L. pholis, 0.44–1.03%.d−1) and GIT were unaffected by temperature in H. antarcticus but increased non-linearly in L.pholis (H. antarcticus 0.22–0.26%.d−1, L. pholis, 0.40–0.86%.d−1). RNA to protein ratios were unaffected by temperature in H. antarcticus but increased weakly, in L.pholis WM and liver. In L.pholis, RNA translational efficiency increased significantly with temperature in all tissues, but only in liver in H. antarcticus. At the overlapping temperature of 3 °C, protein synthesis (WM 26%, Liver, 39%, GIT, 35%) and RNA translational efficiency (WM 273%, Liver, 271%, GIT, 300%) were significantly lower in H. antarcticus than L.pholis, while RNA to protein ratios were significantly higher (WM 270%, Liver 170%, GIT 186%). Tissue specific effects of temperature are detectable in both species. This study provides the first evidence, that tissue protein synthesis rates are constrained in Antarctic fishes.

Deriving connectivity from relatedness: broad-scale isolation-by-distance in the shanny Lipophrys pholis

Knowledge about the dispersal patterns of marine organisms is vital for understanding population dynamics and designing appropriately scaled protected areas and fisheries management. Assessing the extent to which populations are connected by larval exchange has been traditionally approached by delineating genetically differentiated populations. Inferring these patterns for species with high gene flow remains a challenge, as they often show panmixia over large spatial scales. In these cases, genetic connectivity may be revealed through the combination of population- and kinship-based approaches. Here, we assess the population structure and relatedness of the shanny Lipophrys pholis over 500 km along the Western Iberian Peninsula coastline, using 27 microsatellites developed for this study. As expected, given its long larval duration stage, we found high gene flow throughout the study area. However, a weak pattern of isolation-by-distance was detected by Mantel tests and large-scale relatedness patterns, suggesting decreasing genetic similarity with distance at the scale of the Western Iberian Peninsula. Conversely, we provided evidence of fine-scale connectivity at the smaller scale of the Atlantic Islands of Galicia National Park (Spain). Combining population- and kinship-based approaches may reveal previously undetected genetic differentiation within a well-connected population; however, we stress the importance of careful application and interpretation of relatedness metrics. Our findings may be broadened to other coastal organisms featuring similar life-history traits, including a relatively long larval phase, as well as comparable environmental conditions favoring dispersal by ocean currents, which could be directly applied to the management and conservation of Northeast Atlantic marine species.

Lipophrys pholis is larger, grows faster and is in better condition in protected than in unprotected rocky shores

Abstract Intertidal fish are a key component of littoral food webs, contributing to the diets of birds and commercial fish species. Ascertaining their growth and condition can therefore help understand the health status of local communities. Lipophrys pholis is a fish of the rocky intertidal with a wide distribution throughout the North‐eastern Atlantic (NE Atlantic) that has been recommended for use as an indicator in the environmental biomonitoring of marine ecosystems. However, it is unclear yet if this species is sensitive to the reserve effect. In this study, the size, growth and body condition of specimens caught at protected and unprotected rocky shores of two contrasting marine provinces of the NE Atlantic were analysed to address whether L. pholis is sensitive to the reserve effect. L. pholis were larger, grew faster in weight and were in better condition in the protected shores of both provinces. A faster growth rate was observed in the populations of the warmer province. Inshore waters of unprotected sites in the Northern European Seas sampled in this study have recently been incorporated into a protected area. Thus, these results can help assess the success of the marine conservation programme and the time L. pholis needs to improve its population's health at these shores. Regulating access to shores to avoid trampling and harvesting is a protection measure that can help enhance the health and conservation of L. pholis populations.

Feeding, agonistic and cooperative behavioural responses of shallow-water benthic marine scavengers

ABSTRACT Baited remote underwater video station (BRUVS) investigations of benthic scavenging by fish and invertebrates were conducted in an Irish sea lough. Mackerel (Scomber scombrus) baits were deployed under natural light during the day and under dim red light at night. Ethograms for feeding mechanisms and agonistic behaviours were established for four abundant scavengers (two crabs: the harbour crab Liocarcinus depurator, and the European green crab Carcinus maenas; two fish: the shanny Lipophrys pholis, and the small-spotted catshark Scyliorhinus canicula). Crabs’ feeding mechanisms were similar, with differences reflecting their morphologies. Feeding bouts lasted minutes/tens of minutes. Intraspecific agonistic responses were mild and did not result in mutilation or mortality. Feeding mechanisms on macerated baits focussed on ‘chewing’ (combined use of chelipeds and mouthparts to feed continuously); agonistic behaviour was reduced, especially at night when balls of crabs showed ‘cooperative feeding’. Fish feeding bouts lasted for a few seconds in all cases. Shannies showed anticipatory agonistic behaviour (bait ‘guarding’ and ‘patrolling’ by large shannies) before bait maceration. Catsharks exhibited no intraspecific agonistic behaviour but removed large bait morsels by ‘biting’, ‘chewing’ and ‘spinning’. The common prawns Palaemon serratus only scavenged at night and were invisible to other scavengers; they showed no agonistic behaviours. Kleptoparasitism amongst the scavenger guild was common but intra-community predation was extremely rare. Phoretic feeding on bait scraps by red-speckled anemones (Anthopleura ballii) attached to the carapaces of the edible crab Cancer pagurus was observed.

Development of 27 new microsatellite markers for the shanny Lipophrys pholis.

The shanny Lipophrys pholis is an intertidal fish that is widely distributed throughout the Northeast Atlantic. Characterized by limited adult mobility and a long pelagic larval duration, the shanny stands as an ideal model to better understand larval dispersal and connectivity dynamics, which are critical parameters with implications for marine conservation and management. To this aim, we developed 27 highly polymorphic microsatellite markers and characterized a population of 42 individuals, presenting an average allelic diversity of 20.1 alleles per locus and heterozygosity ranging from 0.619 to 1. This set of newly developed microsatellite markers will be useful in providing critical insights into the processes which shape L. pholis gene flow and connectivity patterns and can be used to investigate local parentage lineages.

Site fidelity of fish on a rocky intertidal in the south of Portugal

The short-term site fidelity of intertidal fish species was studied in a rocky intertidal zone in southern Portugal using visible implant elastomer tagging. Eleven fish species were caught, tagged and released, seven of which were recaptured. The larger tide pool with the highest complexity level and located at a lower position in the shore level did not have recaptures, while in others the individual fish species recaptured rate ranged from 11.1 to 38.9%, suggesting that the shore height is a dominant factor influencing site fidelity. Although the breeding season seems not to be the only explanation for the recapture rate, the higher mean recapture rates of Parablennius sanguinolentus, Lipophrys pholis and Gobius cobitis may be related to the parental behaviour of these species during that period. Site fidelity of juveniles of Scorpaena porcus in tidepools is reported for the first time, showing the importance of this habitat as a nursery ground.

Life in the freezer: protein metabolism in Antarctic fish.

Whole-animal, in vivo protein metabolism rates have been reported in temperate and tropical, but not Antarctic fish. Growth in Antarctic species is generally slower than lower latitude species. Protein metabolism data for Antarctic invertebrates show low rates of protein synthesis and unusually high rates of protein degradation. Additionally, in Antarctic fish, increasing evidence suggests a lower frequency of successful folding of nascent proteins and reduced protein stability. This study reports the first whole-animal protein metabolism data for an Antarctic fish. Groups of Antarctic, Harpagifer antarcticus, and temperate, Lipophrys pholis, fish were acclimatized to a range of overlapping water temperatures and food consumption, whole-animal growth and protein metabolism measured. The rates of protein synthesis and growth in Antarctic, but not temperate fish, were relatively insensitive to temperature and were significantly lower in H. antarcticus at 3°C than in L. pholis. Protein degradation was independent of temperature in H. antarcticus and not significantly different to L. pholis at 3°C, while protein synthesis retention efficiency was significantly higher in L. pholis than H. antarcticus at 3°C. These results suggest Antarctic fish degrade a significantly larger proportion of synthesized protein than temperate fish, with fundamental energetic implications for growth at low temperatures.

Pleistophora littoralis . [Descriptions of Fungi and Bacteria

Abstract A description is provided for Pleistophora littoralis , one of only 2 microsporidians recorded from Lipophrys pholis , the shanny, or smooth or common blenny, a North Atlantic fish of the order Blenniiformes. Some information on its morphology, dispersal and transmission and conservation status is given, along with details of its geographical distribution (Europe (UK)) and host ( Lipophrys pholis ).

Molecular insights into the identification and phylogenetics of the cosmopolitan marine fish blood parasite, Haemogregarina bigemina (Adeleorina: Haemogregarinidae).

Haemogregarina bigemina is one of the most prevalent haemogregarines of marine fishes and has long been considered an enigmatic and cosmopolitan species. However, to determine whether H. bigemina truly represents a single global species, or whether it should be partitioned into several species or subspecies, and to confirm its taxonomic status among the Haemogregarina, molecular analysis is required. Here, we provide the first molecular characterisation of H. bigemina from one of its type hosts, Lipophrys pholis, in the UK using 18S rDNA sequences. Phylogenetic and p-distance comparisons of the newly generated H. bigemina sequences with those published from other haemogregarine taxa and related apicomplexans suggest that H. bigemina falls outside of the “Haemogregarina” clade as well as the Adeleorina altogether, forming a separate apicomplexan marine clade, and appears to be in fact more closely related to other non-haemogregarine Apicomplexa genera. Further work including sequences of H. bigemina and H. bigemina-like parasites observed from fishes in other localities is now needed to investigate this further.

Increasing temperature decreases the predatory effect of the intertidal shanny Lipophrys pholis on an amphipod prey.

Interactions between Lipophrys pholis and its amphipod prey Echinogammarus marinus were used to investigate the effect of changing water temperatures, comparing current and predicted mean summer temperatures. Contrary to expectations, predator attack rates significantly decreased with increasing temperature. Handling times were significantly longer at 19° C than at 17 and 15° C and the maximum feeding estimate was significantly lower at 19° C than at 17° C. Functional-response type changed from a destabilizing type II to the more stabilizing type III with a temperature increase to 19° C. This suggests that a temperature increase can mediate refuge for prey at low densities. Predatory pressure by teleosts may be dampened by a large increase in temperature (here from 15 to 19° C), but a short-term and smaller temperature increase (to 17° C) may increase destabilizing resource consumption due to high maximum feeding rates; this has implications for the stability of important intertidal ecosystems during warming events.

Movement, connectivity and population structure of the intertidal fish Lipophrys pholis as revealed by otolith oxygen and carbon stable isotopes

ABSTRACTThe shanny Lipophrys pholis is an intertidal fish commonly found in Portuguese coastal waters. Spawning takes place from early autumn to mid spring, after which demersal eggs hatch and larvae disperse along the coast. Two to three months later, young juveniles return to the tide pools to settle. However, information on fish movement, habitat connectivity and population structure is scarce for this species. One hundred and twenty early juveniles (16–35 mm) were collected in April 2014 from six rocky beaches along the western and south Portuguese coasts (Agudela, Cabo do Mundo, Boa Nova, Peniche, Sines and Olhos de Água). δ18O and δ13C were determined by isotope-ratio mass spectrometry. Data were analysed to determine whether isotopic signatures could be used to assess the degree of separation between individuals collected from different locations. Mean δ13C and δ18O values ranged from −0.02‰ to 1.14‰ and −7.77‰ to −6.62‰, respectively. Both seawater temperature and salinity caused differences in otolith δ18O among the four main sampling areas. The variation among areas in δ13C was most likely related to slight differences in the diet, growth and metabolism of fish. The distinct isotopic signatures, at least for the northern and central areas, suggested low levels of connectivity across large spatial scales during the juvenile stage. Furthermore, similar isotopic signatures within the same area indicated some degree of larval oceanic retention at short spatial scales. This study suggests that stable isotope records in otoliths could provide information about the home residency, movements and habitat connectivity of intertidal fishes.

Population dynamics of two sympatric intertidal fish species (the shanny, Lipophrys pholis and long-spined scorpion fish, Taurulus bubalis) of Great Britain

The shanny/common blenny (Lipophrys pholis) and long-spined scorpionfish/bullhead (Taurulus bubalis) are commonly encountered, sympatric species within much of Great Britain's rocky intertidal zones. Despite being prey items of the cod (Gadus morhua) and haddock (Melanogrammus aeglefinus) respectively, and both contributors to the diet of the near-threatened European otter (Lutra lutra), little is known on the population dynamics of the temperate specimens of Great Britain. It is further less known of the degrees of sympatricity between the two fish species and to what extent they are able to coexist. The current study examines spatio-temporal distributions and abundances at various resolutions: monthly population dynamics of both species along England's Yorkshire coast and seasonal population dynamics along the Yorkshire coast and around the Isle of Anglesey, Wales. Studies of their abundances, sizes, degrees of rock pool co-occurrence and diel activities are further examined, which indicate coexistence is maintained when interspecific co-occurrence takes place only between specimens of similar sizes, thus demoting size-related dominance hierarchies.

Home sweet home: evidence for nest-fidelity in the rocky intertidal fish, the shanny Lipophrys pholis.

The ability to be faithful to a particular area or site was analysed in the shanny Lipophrys pholis. Using passive integrated transponders, adults from a population of L. pholis at Cabo Raso, Portugal, were followed over a period of 3 years. The findings showed that site fidelity is a consistent behaviour during the breeding season with specific breeding males being found only in particular sectors within the area, and in specific nests throughout the years. The fact that, in general, L. pholis individuals were absent from the study area during the non-breeding season and breeding males were recorded returning to the same nests and sectors for consecutive breeding seasons suggests that they have developed excellent homing abilities. Translocation data corroborate this idea showing that breeding males successfully returned to their nests after a displacement of >100 m. Altogether, these findings highlight the relevance of life-history traits (e.g. nesting) in the conditioning of site fidelity and homing for this species of rocky intertidal fish, and more importantly, provide evidence for the need of a well-developed navigational system.

Pelagic larval duration, size at settlement and coastal recruitment of the intertidal blennyLipophrys pholis

To study some early life history traits ofLipophrys pholis, 110 recruits (TL ≤ 30 mm) were collected in April and May 2013 during the low tide periods in four rocky beaches along the west (Cabo do Mundo, Peniche and Vale do Homem) and south (Olhos de Água) Portuguese coasts. Pelagic larval duration, size at settlement and age at coastal recruitment were back-calculated from the microstructure of otoliths. Pelagic larval duration estimated from micro-increment counts until the settlement marks ranged from 57 to 73 days and showed a latitudinal reduction trend from north to south. This variable seems to be related in 30% with the regional seawater temperatures probably through the direct effect on the somatic growth. Settlement sizes (~19 mm) did not show any regional differences suggesting that this is a more conservative character within species. The mean age at coastal recruitment varied between 69 and 93 days, but northern individuals were recruited at an older age. Back-calculated spawning, hatching and settlement dates appear to be unrelated to the lunar cycle forL. pholis.

Diet as a mechanism of coexistence between intertidal fish species of the U.K.

While the syntopic nature of many intertidal fish communities suggest that resources such as food are shared, little has been done to assess the importance of diet on the coexistence of intertidal fish of the U.K. In this study, six intertidal fish species (shanny, Lipophrys pholis, Blenniidae; long-spined scorpion fish, Taurulus bubalis, Cottidae; two-spotted goby, Gobiusculus flavescens, Gobiidae; rock goby, Gobius paganellus, Gobiidae; plaice, Pleuronectes platessa, Pleuronectidae; butterfish, Pholis gunnellus, Pholidae) were collected from two sites along the east coast of England (Filey and Thornwick Bay) and two sites around the coast of the Isle of Anglesey, North Wales (Rhosneigr and Penrhos), during summer and winter. A comparison of the diets of those in the highest abundances (L. pholis, T. bubalis and G. flavescens) found that, in general, prey preferences were dissimilar between species, albeit with some slight overlap, and therefore it could be said that diet acts as an important mechanism of interspecific coexistence.

Genetic Structure and Effective Population Size through Time: A Tale on Two Coastal Marine Species with Contrasting Life-History Patterns

Background: Species with planktonic larvae are more likely to show temporal genetic variation, due to differences in larval mortality and dispersal ability. The shanny Lipophrys pholis is a typical benthic rocky intertidal fish with its dispersion limited to a long larval stage. In contrast, the sand smelt Atherina presbyter has a very short planktonic life, small size and weak swimming capabilities, which translates into reduced dispersion potential. Methods: A total of 226 shanny specimens (collected in 2003, 2013 and 2014) and 281 sand smelts (collected in 2005, 2012, 2013 and 2014) were screened for genetic variation using the mitochondrial control region. Genealogies, genetic diversities, temporal structures and contemporary effective population sizes were assessed. Results: Haplotype networks showed deep genealogies with multiple levels of diversification and no temporal structure. Genetic diversity indices showed little variation among sampling periods and were generally high. For L. pholis significant genetic differentiation was detected between 2013 and 2014, while no significant differences were detected between sampling periods in A. presbyter. The shanny showed lower effective population size per generation when compared to the sand smelt (which yielded lack of evidence for genetic drift for the first two periods of the study). Conclusion: These results highlight the fact that temporal changes in the gene pool composition need to be considered when evaluating population structure, especially for species with long pelagic larval dispersion, more vulnerable to fluctuations in the recruitment.

The first use of Fulton's K for assessing and comparing the conditions of inter‐tidal fish populations

AbstractFulton's K condition factor was applied, for the first time, to inter‐tidal specimens of the shanny (Lipophrys pholis) and long‐spined scorpion fish (Taurulus bubalis) from two English rocky shore and two Welsh rocky shore sites during summer 2010 and winter 2011. As both species contribute to the diet of commercial species such as cod (Gadus morhua) and near‐threatened species such as the European otter (Lutra lutra), their condition may affect that of these predators. Fulton's K found that inter‐tidal Welsh fish maintained a ‘good’ condition between seasons, whereas the inter‐tidal English fish were in a poorer condition during winter. Although condition also changed amongst the sites on each coast, further studies are needed into fish morphologies, environmental parameters, prey availabilities and abundances, and fish specimen sex and maturities.

Validation of otolith daily increments in early juveniles of shanny Lipophrys pholis

To assess the periodicity of micro-increment formation in otoliths of Lipophrys pholis, 90 early juveniles were immersed in alizarin red S or tetracycline hydrochloride for 24 h and sacrificed after 10, 20 and 30 days. The number of micro-increments viewed under light microscopy was significantly related to the duration of the experimental period, and the slopes of the linear regressions were not significantly different from 1. This study indicates that micro-increments in sagittae were deposited daily and can be used as reliable sources of age information for L. pholis.

Ammonia excretion and expression of transport proteins in the gills and skin of the intertidal fish Lipophrys pholis

Intertidal pools are intensely challenging environments, due to rapid and extreme fluctuations in water conditions during the tidal cycle. Emersion is another challenge intertidal fishes may face. Mechanisms of ammonia excretion and ion regulation were studied in the resident amphibious blennid Lipophrys pholis. The ammonia transporters Rhcg1 and Rhcg2 were cloned and characterized. Fish were challenged for 24h to 1) emersion, 2) fresh water (FW), and 3) high environmental ammonia (HEA; 1mM NH4Cl), or 4) ammonia loading (1.5μmol/g NH4HCO3). When air exposed, L. pholis maintained aquatic ammonia excretion rates (JAmm) while branchial Na+/K+-ATPase (NKA) activity increased, but no changes at the protein or mRNA levels of transporters were noted. In FW, JAmm decreased and osmotic problems were encountered. Skin NKA activity decreased, branchial Rhcg2, and skin Rhcg1 and Rhcg2 increased. Exposure to HEA only increased branchial Rhcg2 levels. Although internal ammonia loading only led to a modest non-significant increase in JAmm, skin NKA (activity and α-subunit), carbonic anhydrase protein levels, and branchial Rhcg1 levels increased. In summary, variable responses were observed involving both gill and skin but given the instability of its habitat, the constitutive expression of transporters is likely also of importance.