Biomass Monitoring Research Articles

VODCA v2: multi-sensor, multi-frequency vegetation optical depth data for long-term canopy dynamics and biomass monitoring

VODCA v2: multi-sensor, multi-frequency vegetation optical depth data for long-term canopy dynamics and biomass monitoring

Application of a Novel Disposable Flow Cell for Spectroscopic Bioprocess Monitoring

The evaluation of the analytical capabilities of a novel disposable flow cell for spectroscopic bioprocess monitoring is presented. The flow cell is presterilized and can be connected to any kind of bioreactor by weldable tube connections. It is clamped into a reusable holder, which is equipped with SMA-terminated optical fibers or an integrated light source and detection unit. This modular construction enables spectroscopic techniques like UV-Vis spectroscopy or turbidity measurements by scattered light for modern disposable bioreactors. A NIR scattering module was used for biomass monitoring in different cultivations. A high-cell-density fed-batch cultivation with Komagataella phaffii and a continuous perfusion cultivation with a CHO DG44 cell line were conducted. A high correlation between the sensor signal and biomass or viable cell count was observed. Furthermore, the sensor shows high sensitivity during low turbidity states, as well as a high dynamic range to monitor high turbidity values without saturation effects. In addition to upstream processing, the sensor system was used to monitor the purification process of a monoclonal antibody. The absorption module enables simple and cost-efficient monitoring of downstream processing and quality control measurements. Recorded absorption spectra can be used for antibody aggregate detection, due to an increase in overall optical density.

Monitoring aboveground organs biomass of wheat and maize: A novel model combining ensemble learning and allometric theory

Accurate monitoring of crop organ biomass facilitates optimizing agronomic strategies to maximize yield or economic benefit. Unmanned aerial vehicle (UAV) is extensively employed for aboveground biomass (AGB) monitoring at the farm scale, but previous studies have mostly concentrated on total AGB rather than individual organ biomass. Furthermore, film-mulched crops, a widely used cropping pattern in northwest China, have received less attention for AGB monitoring. We aim to develop a novel model to precisely estimate the AGB of leaf (AGBLeaf), stem (AGBStem), and reproductive organs (AGBR) by UAV for film-mulched wheat and maize. The maize-wheat rotation field experiments with treatments of five nitrogen application amounts and three planting densities were conducted from 2021 to 2023, respectively. Firstly, we constructed allometric models at jointing, heading (tasseling), and grain filling stages by ground sampling data in 2021–2022. Next, the input feature set was obtained by feature selection methods (Lasso and Boruta) using UAV image data, and three traditional methods (partial least squares, ridge regression, and support vector machine) and three ensemble learning models (random forest, extreme gradient boosting, and local cascade ensemble (LCE)) were trained for AGBLeaf inversion based on the physically-based PROSAIL model simulation dataset. Finally, the optimal AGBLeaf inversion hybrid model was coupled with the allometric model to estimate the AGBStem and AGBR in 2022–2023. The results indicated that both wheat and maize organ biomass conformed to the allometric pattern. While feature selection helped reduce computation and complexity, but didn’t improve monitoring accuracy. The normalized root mean square error (NRMSE) of the optimal hybrid model (PROSAIL + Boruta + LCE) on the measured wheat and maize AGBLeaf datasets were 12.72 %–24.93 % and 19.65 %–25.16 %, respectively. After coupling the allometric model, the coefficient of determination (R2) of wheat and maize AGBStem were 0.64–0.85 and 0.63–0.68, and the NRMSE were 15.05 %–25.28 % and 24.10 %–27.06 %, respectively; and the corresponding R2 of AGBR was 0.67–0.76 and 0.72, and the NRMSE were 16.81 %–22.12 % and 21.66 %, for wheat and maize, respectively. Overall, the novel model performed well in film-mulched wheat and maize, providing a cost-effective approach for organ biomass monitoring. In the future, further validation of the model’s transferability is necessary to increase the potential for generalization in production practice.

Accounting for minimum data required to train a machine learning model to accurately monitor Australian dairy pastures using remote sensing

Precision in grazing management is highly dependent on accurate pasture monitoring. Typically, this is often overlooked because existing approaches are labour-intensive, need calibration, and are commonly perceived as inaccurate. Machine-learning processes harnessing big data, including remote sensing, can offer a new era of decision-support tools (DST) for pasture monitoring. Its application on-farm remains poor because of a lack of evidence about its accuracy. This study aimed at evaluating and quantifying the minimum data required to train a machine-learning satellite-based DST focusing on accurate pasture biomass prediction using this approach. Management data from 14 farms in New South Wales, Australia and measured pasture biomass throughout 12 consecutive months using a calibrated rising plate meter (RPM) as well as pasture biomass estimated using a DST based on high temporal/spatial resolution satellite images were available. Data were balanced according to farm and week of each month and randomly allocated for model evaluation (20%) and for progressive training (80%) as follows: 25% training subset (1W: week 1 in each month); 50% (2W: week 1 and 3); 75% (3W: week 1, 3, and 4); and 100% (4W: week 1 to 4). Pasture biomass estimates using the DST across all training datasets were evaluated against a calibrated rising plate meter (RPM) using mean-absolute error (MAE, kg DM/ha) among other statistics. Tukey’s HSD test was used to determine the differences between MAE across all training datasets. Relative to the control (no training, MAE: 498 kg DM ha−1) 1W did not improve the prediction accuracy of the DST (P > 0.05). With the 2W training dataset, the MAE decreased to 342 kg DM ha−1 (P < 0.001), while for the other training datasets, MAE decreased marginally (P > 0.05). This study accounts for minimal training data for a machine-learning DST to monitor pastures from satellites with comparable accuracy to a calibrated RPM which is considered the ‘gold standard’ for pasture biomass monitoring.

Crop aboveground biomass monitoring model based on UAV spectral index reconstruction and Bayesian model averaging: A case study of film-mulched wheat and maize

Aboveground biomass (AGB) directly reflects crop carbon fixation capacity. Utilizing unmanned aerial vehicle (UAV) remote sensing for high-throughput AGB monitoring offers benefits to agricultural management and food production. This study aimed to develop a method for monitoring AGB in film-mulched crops using UAV multispectral data. A three-year field experiment was conducted using wheat (Exps. 1 and 2 in 2021–2022, and Exps. 5 and 6 in 2022–2023) and maize (Exps. 3 and 4) with varying cropping patterns. Spectral indices (SIs) of different feature reflectances (e.g., vegetation, soil, and mulch pixels) were reconstructed using least absolute shrinkage and selection operator methods. The Bayesian model averaging (BMA) method integrated seven independent machine learning algorithms to construct a Bayesian ensemble model (BEM). The results demonstrated that spectral index reconstruction (SIR) enhanced the correlation between SIs and AGB, while BMA reduced model uncertainty and improved AGB prediction accuracy. The BEM model, based on Exps. 1 and 2 datasets, achieved determination coefficients of 0.78–0.84 and root mean square error (RMSE) of 0.81–0.89 t ha−1. Model validation across years and crops demonstrated the generalization of the SIR + BEM method for AGB estimation. The RMSEs of the model inter-annual transport predictions were 0.83 and 0.93 t ha−1 in Exps. 5 and 6, respectively, and RMSE of the predictions between crops was 1.43 t ha−1 for the maize dataset (Exps. 3 + 4). The approach proposed in this study has great potential for monitoring growth status of film-mulched crops at the farm scale and providing guidance for precision agriculture management.

Estimation of Millet Aboveground Biomass Utilizing Multi-Source UAV Image Feature Fusion

Aboveground biomass (AGB) is a key parameter reflecting crop growth which plays a vital role in agricultural management and ecosystem assessment. Real-time and non-destructive biomass monitoring is essential for accurate field management and crop yield prediction. This study utilizes a multi-sensor-equipped unmanned aerial vehicle (UAV) to collect remote sensing data during critical growth stages of millet, including spectral, textural, thermal, and point cloud information. The use of RGB point cloud data facilitated plant height extraction, enabling subsequent analysis to discern correlations between spectral parameters, textural indices, canopy temperatures, plant height, and biomass. Multiple linear regression (MLR), support vector machine (SVM), and random forest (RF) models were constructed to evaluate the capability of different features and integrated multi-source features in estimating the AGB. Findings demonstrated a strong correlation between the plant height derived from point cloud data and the directly measured plant height, with the most accurate estimation of millet plant height achieving an R2 of 0.873 and RMSE of 7.511 cm. Spectral parameters, canopy temperature, and plant height showed a high correlation with the AGB, and the correlation with the AGB was significantly improved after texture features were linearly transformed. Among single-factor features, the RF model based on textural indices showcased the highest accuracy in estimating the AGB (R2 = 0.698, RMSE = 0.323 kg m−2, and RPD = 1.821). When integrating two features, the RF model incorporating textural indices and canopy temperature data demonstrated optimal performance (R2 = 0.801, RMSE = 0.253 kg m−2, and RPD = 2.244). When the three features were fused, the RF model constructed by fusing spectral parameters, texture indices, and canopy temperature data was the best (R2 = 0.869, RMSE = 0.217 kg m−2, and RPD = 2.766). The RF model based on spectral parameters, texture indices, canopy temperature, and plant height had the highest accuracy (R2 = 0.877, RMSE = 0.207 kg m−2, and RPD = 2.847). In this study, the complementary and synergistic effects of multi-source remote sensing data were leveraged to enhance the accuracy and stability of the biomass estimation model.

Biomass Estimation with GNSS Reflectometry Using a Deep Learning Retrieval Model

GNSS Reflectometry (GNSS-R) is an emerging technique for the remote sensing of the environment. Traditional GNSS-R bio-geophysical parameter retrieval algorithms and deep learning models utilize observables derived from only the peak power of the delay-Doppler maps (DDMs), discarding the rest. This reduces the data available, which potentially hinders estimation accuracy. In addition, reflections from water bodies dominate the signal amplitude, and using only the peak power in those areas is challenging. Motivated by all the above, we propose a novel deep learning retrieval model for biomass estimation that uses the full DDM of surface reflectivity. Experiments using CYGNSS data have illustrated the improvements achieved when using the full DDM of surface reflectivity. Our proposed model was able to estimate biomass, trained using the ESA Climate Change Initiative (CCI) biomass map, outperforming the model that used peak reflectivity. Global and regional analysis is provided along with an illustration of how biomass estimation is achieved when using the full DDM around water bodies. GNSS-R could become an efficient method for biomass monitoring with fast revisit times. However, an elaborate calibration is necessary for the retrieval models, to associate GNSS-R data with bio-geophysical parameters on the ground. To achieve this, further developments with improved training data are required, as well as work using in situ validation data. Nevertheless, using GNSS-R and deep learning retrieval models has the potential to enable fast and persistent biomass monitoring and help us better understand our changing climate.

Evaluating the Research Status of the Remote Sensing-Mediated Monitoring of Forest Biomass: A Bibliometric Analysis of WOS

Forests serve as the largest carbon reservoir in terrestrial ecosystems, playing a crucial role in mitigating global warming and achieving the goal of “carbon neutrality”. Forest biomass is intrinsically related to carbon sinks and sources in forest ecosystems, and thus, the accurate monitoring of forest biomass is of great significance in ensuring ecological security and maintaining the global carbon balance. Significantly, remote sensing is not only able to estimate forest biomass at a large spatial scale but does so quickly, accurately, and without loss. Moreover, it can obtain forest biomass in areas inaccessible to human beings, which have become the main data source for forest biomass estimation at present. For this reason, this study analyzes the current research status, research hotspots, and future research trends in the field of remote sensing monitoring of forest biomass based on 1678 forest biomass remote sensing monitoring results from 1985 to 2023 obtained from the Web of Science Core Collection database. The results showed that the following: (1) The number of publications showed an exponential upward trend from 1985 to 2023, with an average annual growth rate of 2.64%. The top ten journals contributed to 53.76% of the total number of publications and 52.89% of the total number of citations in the field. (2) In particular, Remote Sensing of Environment has maintained a leading position in the field for an extended period, boasting the highest impact factor. Additionally, the author Saatchi S. stands out with the highest total number of citations for articles. (3) Keyword clustering analysis revealed that the main research topics in the remote sensing monitoring of forest biomass can be categorized into the following: optical remote sensing, LiDAR remote sensing, SAR remote sensing, and carbon stock. The explosion of keywords in the last six years indicates that an increasing number of researchers are focusing on carbon, airborne LiDAR data, biomass mapping, and constructing optimal biomass models.

Dielectric spectroscopy with machine learning integrated approach to analysis the influence of N:P ratio on algae growth modeling for forecasting

The task of monitoring algal biomass is a significant challenge in contemporary environmental conservation. A novel technique called dielectric spectroscopy with machine learning integration is an intelligent approach to address this challenge. This work optimized a machine learning supervised PCA, Hierarchical cluster analysis & linear regression model -strengthen the real-time dielectric spectroscopy approach to study the influence of N:P ratios on a model algae Desmodesmus sp. growth for forecasting. As a primary feature, different N:P concentrations (1:1, 2:1, 3:1, 1:2, and 1:3) were utilized to characterize the relationship between dielectric (S11(dB) & ε'') and conventional UV–vis spectroscopy properties (OD686 & Chl-a). The dielectric measurements of S11(dB) & ε'' are consistent with the OD686 & Chl-a value. Highest Desmodesmus sp. OD686 0.87, 0.76 recorded at N:P 3:1, 2:1 ratio respectively. The machine learning based PCA, Hierarchical cluster analysis and linear regression model were applied and found at 0–8 days incubation Desmodesmus sp. growth biomass negatively corelated with S11(dB) & ε“ and positively correlatedly with OD686 & Chl-a respectively, with R2 values > 0.95. While for the 0&8days measured ε”& S11(dB) were −6.169&-0.4765; −7.956 &-0.6775 respectively, the linear regression model was applied to predicted OD686 for 0&8 days was 0.299, 0.234; 0.817, 0.716 respectively, at the ratios N:P (3:1) and the RMES were 0.0047 & 0.0319 respectively. This analysis revealed that the machine learning based integrated approach has high accuracy. Thus, Dielectric spectroscopy and machine learning-integrated method could strengthen to the real-time monitoring of algal biomass or predicting to control the N:P ratios to protecting aquatic ecosystem.

Dynamic monitoring of aboveground biomass in inner Mongolia grasslands over the past 23 Years using GEE and analysis of its driving forces

Aboveground biomass (AGB) in grasslands directly reflects the net primary productivity, making it a sensitive indicator of grassland resource quality and ecological degradation. Accurately estimating AGB over large regions to reveal long-term AGB evolution trends remains a formidable challenge. In this study, we divided Inner Mongolia Autonomous Region (IMAR) grasslands into three study regions based on their spatial distribution of grassland types. We combined remote sensing data with ground-based sample data collected over the past 19 years from 6114 field plots using the Google Earth Engine platform. We constructed random forest (RF) and traditional regression AGB inversion models for each region and selected the best-performing model through accuracy assessment to estimate IMAR grassland AGB for the period 2000–2022. We also examined the trends in AGB changes and identified the driving forces affecting IMAR grasslands through the application of Theil-Sen estimation, Mann-Kendall trend analysis, and the Geodetector model. The main findings are as follows: (1) Compared with the univariate parametric traditional regression model, the AGB monitoring accuracy of the multivariate non-parametric RF model in the three study regions increased by 5.94%, 5.08% and 19.14%, respectively. (2) The average AGB per unit area of IMAR grasslands from 2000 to 2022 was 731.41 kg/hm2, with alpine meadow having the highest average AGB (1271.70 kg/hm2) and temperate grassland desertification having the lowest (469.06 kg/hm2). IMAR grasslands exhibited an overall increasing trend in AGB over the past 23 years (6.01 kg/hm2•yr), with the increasing trend covering 83.52% of the grassland area and the decreasing trend covering 16.48%. (3) Spatially, IMAR grassland AGB showed a gradual decline from northeast to southwest and exhibited an increasing trend with increasing longitude (45.423 kg/hm2 per degree) and latitude (71.9 kg/hm2 per degree). (4) Meteorological factors were the most significant factors affecting IMAR grassland AGB, with precipitation (five-year average q value of 0.61) being the most prominent. In the western part of IMAR, where precipitation is consistently limited throughout the year, the primary drivers of influence were human activities, with particular emphasis on the number of livestock (with a five-year average q value of 0.44). It is evident that reducing human activity disturbance and pressure in fragile grassland areas or implementing near-natural restoration measures will be beneficial for the sustainable development of grassland ecosystems. The results of this research hold substantial reference importance for the protection and restoration of grasslands, the supervision and administration of grassland resources, as well as the development of policies related to grassland management.

Utilizing Spectral, Structural and Textural Features for Estimating Oat Above-Ground Biomass Using UAV-Based Multispectral Data and Machine Learning.

Accurate and timely monitoring of biomass in breeding nurseries is essential for evaluating plant performance and selecting superior genotypes. Traditional methods for phenotyping above-ground biomass in field conditions requires significant time, cost, and labor. Unmanned Aerial Vehicles (UAVs) offer a rapid and non-destructive approach for phenotyping multiple field plots at a low cost. While Vegetation Indices (VIs) extracted from remote sensing imagery have been widely employed for biomass estimation, they mainly capture spectral information and disregard the 3D canopy structure and spatial pixel relationships. Addressing these limitations, this study, conducted in 2020 and 2021, aimed to explore the potential of integrating UAV multispectral imagery-derived canopy spectral, structural, and textural features with machine learning algorithms for accurate oat biomass estimation. Six oat genotypes planted at two seeding rates were evaluated in two South Dakota locations at multiple growth stages. Plot-level canopy spectral, structural, and textural features were extracted from the multispectral imagery and used as input variables for three machine learning models: Partial Least Squares Regression (PLSR), Support Vector Regression (SVR), and Random Forest Regression (RFR). The results showed that (1) in addition to canopy spectral features, canopy structural and textural features are also important indicators for oat biomass estimation; (2) combining spectral, structural, and textural features significantly improved biomass estimation accuracy over using a single feature type; (3) machine learning algorithms showed good predictive ability with slightly better estimation accuracy shown by RFR (R2 = 0.926 and relative root mean square error (RMSE%) = 15.97%). This study demonstrated the benefits of UAV imagery-based multi-feature fusion using machine learning for above-ground biomass estimation in oat breeding nurseries, holding promise for enhancing the efficiency of oat breeding through UAV-based phenotyping and crop management practices.

Summer Biomass Variability and Spatial Interactions between European Sprat (Sprattus sprattus) and Moon Jellyfish (Aurelia aurita) in the Western Part of the Black Sea

Over the past few decades, various causal connections between commercial small pelagic fish species and gelatinous zooplankton have been reported in the Black Sea, which affect the pelagic ecosystem. Recently, moon jellyfish regained dominance among gelatinous plankton; however, biomass fluctuations and interactions with small pelagic fish remain poorly understood. During the summers of 2019–2022, scientific pelagic trawl surveys in the Western Black Sea enabled simultaneous monitoring of small pelagic fish biomass, with sprat as the key species and moon jellyfish as an incidental catch. In total, 153 trawl hauls were conducted across four depth strata from 15 to 100 m, and a “swept area” method was used for biomass estimation. The sprat stock biomass ranged from 10,698 to 29,177 t, with an average value of 19,432 ± 4834 t. The total biomass of moon jellyfish was 2002 ± 868.73 t, and dense aggregations were observed in the coastal waters during certain years. Two scenarios of spatial interactions between planktivorous species were identified and linked to the formation of A. aurita aggregations. We found that changes in jellyfish density were associated with weak-to-moderate effects on the spatial distribution of sprat assemblages in coastal areas.

Enhancing Forest Security through Advanced Surveillance Applications

Forests established through afforestation are one of the most precious natural resources, especially in harsh and desert-biased conditions. Trees are often exposed to various threats that need to be addressed. Some of the threats are igniting fires, illegal lumberjacking, hunting, using, and crossing prohibited areas, etc. This article delves into the combination of advanced technologies, such as radars, thermal imaging, remote sensing, artificial intelligence, and biomass monitoring systems, in the field of forestry and natural resource security. By examining the parametric assurance technologies described in this paper, the potentials of real-time monitoring, early detection of threats, and rapid response capabilities are examined, which significantly improves the efficiency of forest protection efforts. This article deals with the presentation of advanced algorithms that include radar, thermal cameras, and artificial intelligence, which enable the automatic identification and classification of potential threats with a false alarm rate (FAR) as low as possible. The article presents a systemic solution that optimizes the answer for a parametric security system that is required to work in a complex environment with multiple triggers that can cause false alarms. In addition to this, a presented system is required to be easy to assemble and have the ability to integrate into natural areas and serve as a vulnerable aid in nature as much as possible. In conclusion, this study highlights the transformative potential of security applications in improving forest and natural reserve security while taking into account the complexity of the environment.

Combining Multisource Data and Machine Learning Approaches for Multiscale Estimation of Forest Biomass

Forest biomass is an important indicator of forest ecosystem productivity, and it plays vital roles in the global carbon cycling, global climate change mitigating, and ecosystem researches. Multiscale, rapid, and accurate extraction of forest biomass information is always a research topic. In this study, comprehensive investigation of a larch (Larix olgensis) plantation was performed using remote sensing and field-based monitoring methods, in combination with LiDAR-based multisource data and machine learning methods. On this basis, a universal, multiscale (single tree, stand, management unit, and region), and unit-high-precision continuous monitoring method was proposed for forest biomass components. The results revealed the following. (1) Airborne LiDAR point cloud variables exhibited significant correlation with the aboveground components (except leaves) and the whole-plant biomass (Radj2 &gt; 0.91), suitable for extraction or estimation of forest parameters such as biomass and stock volume. (2) In terms of biomass monitoring at forest stand and management unit scale, a random forest model performed well in fitting accuracy and generalization ability, whereas a multiple linear regression model produced clearer explanation regarding the biomass of each forest component. (3) Using seasonal phenological characteristics in the study area, larch distribution information was extracted effectively. The overall accuracy reached 90.0%, and the kappa coefficient reached 0.88. (4) A regional-scale forest biomass component estimation model was constructed using a long short-term memory model, which effectively reduced the probability of biomass underestimation while ensuring good estimation accuracy, with R2 exceeding 0.6 for the biomass of the aboveground and whole-plant components. This research provides theoretical support for rapid and accurate acquisition of large-scale forest biomass information.

2 Satellite-Based Decision Support Tools to Assist Grazing Cattle Production

Abstract Grasslands cover approximately 40.5% of the surface of the earth and 80% of agriculturally productive land. After forests, grasslands are the primary carbon sink source and the most used feed source for livestock production. Regularly monitoring grasslands assures efficient management and sustainability of pasture-based production systems. Conventional ground-based methods to monitor grassland production and management rely on field measurements, which are time-consuming and usually restricted to small-scale assessment. Using satellite information allows for large-scale monitoring of grasslands and capturing the spatial variability of the land surface with high temporal resolution. Various methods for grassland monitoring based on satellite data can be applied, such as classifications, correlations/regression analyses, and time series analyses. Depending on the purpose of the application, these methods are sometimes combined to derive grassland management and production information. The ability of satellite-based data to quantify vegetation characteristics depends on the type of sensor and instrumentation features, such as spectral, radiometric, spatial, and temporal resolution, polarization, and angularity. The models to estimate grassland biomass based on remote sensing have been chiefly focused on optical systems. The spectral reflectance of raw bands and vegetation indices were used as proxies to investigate spatial and temporal patterns of grassland production. Optical (multispectral or hyperspectral) sensors are passive and require sunlight, so they depend highly on the weather (cloud) and light conditions. Thus, there has been increasing interest in active sensors, such as Synthetic Aperture Radar (SAR) and Light Detection and Ranging (LIDAR) sensors, which are not constrained due to clouds but are more complex. Using satellite data in combination with field measurements has commonly yielded regression models (e.g., linear, power, logarithmic, multiple linear) for estimating grassland biomass or biophysical characteristics (e.g., chlorophyll, leaf area index) of different types of grasslands. The exponential evolution of digital computers has pushed forward machine learning-based regression methods to estimate biomass. Random forest, support vector machines, and artificial neural networks are the most used algorithms. The possibility of accurate mapping and monitoring of biomass and nutritional attributes of grasslands based on satellite provides essential insights into the decision support system for pasture management. A better understanding of the nitrogen status of pastures, forage biomass, and its nutritive value is instrumental in livestock and forage management. Timely prediction of these variables can help improve decision-making by grazing land managers on, for instance, the adjustment of stocking rate or adequate supplementation to match the needs of animals toward more sustainable production. Future use of satellite-based grazing models in tandem with ruminant nutrition models will enable to development of decision-support tools to assist with many aspects of livestock production in diverse environmental conditions and accounting for temporal variability. (FAPESP #2020/14367-7)

Optimizing Drone-Based Surface Models for Prescribed Fire Monitoring

Prescribed burning and pyric herbivory play pivotal roles in mitigating wildfire risks, underscoring the imperative of consistent biomass monitoring for assessing fuel load reductions. Drone-derived surface models promise uninterrupted biomass surveillance but require complex photogrammetric processing. In a Mediterranean mountain shrubland burning experiment, we refined a Structure from Motion (SfM) and Multi-View Stereopsis (MVS) workflow to diminish biases in 3D modeling and RGB drone imagery-based surface reconstructions. Given the multitude of SfM-MVS processing alternatives, stringent quality oversight becomes paramount. We executed the following steps: (i) calculated Root Mean Square Error (RMSE) between Global Navigation Satellite System (GNSS) checkpoints to assess SfM sparse cloud optimization during georeferencing; (ii) evaluated elevation accuracy by comparing the Mean Absolute Error (MAE) of six surface and thirty terrain clouds against GNSS readings and known box dimensions; and (iii) complemented a dense cloud quality assessment with density metrics. Balancing overall accuracy and density, we selected surface and terrain cloud versions for high-resolution (2 cm pixel size) and accurate (DSM, MAE = 57 mm; DTM, MAE = 48 mm) Digital Elevation Model (DEM) generation. These DEMs, along with exceptional height and volume models (height, MAE = 12 mm; volume, MAE = 909.20 cm3) segmented by reference box true surface area, substantially contribute to burn impact assessment and vegetation monitoring in fire management systems.

Above ground tree biomass modeling using machine learning algorithms in western Terai Sal Forest of Nepal

The monitoring of forest biomass is a crucial biophysical parameter in forest ecosystems, as it provides valuable information for managing forests sustainably and tracking carbon circulation statistics. To achieve sustainable forest management, it is essential to monitor and study forest resources, particularly biomass. This study aimed to model above ground tree biomass (AGTB) using Machine Learning Algorithms (MLAs) in the western terai Sal forest of Nepal. AGTB was calculated using a systematic inventory sample plot, while spectral and textural variables were processed and masked for the study area using Sentinel-2A satellite imagery. Three MLAs namely support vector machine (SVM), random forest (RF), and stochastic gradient boosting (SGB), were employed for modeling with eight categorized variable datasets. Among the MLAs, the RF algorithm with a combination of gray-level co-occurrence matrix (GLCM) and raw bands (RB) dataset variable demonstrated the best performance, with a low RMSE value of 78.81 t ha−1 in the test data. However, the AGTB range from this model ranged from 118.34 to 425.97 t ha−1. The study found that traditional indices, raw bands, and GLCM texture from near-infrared were important variables for AGTB. Nevertheless, the RF algorithm and the dataset combination of GLCM plus raw bands (RB) exhibited excellent performance in all model runs. Thus, this pioneering study on comparative MLAs-based AGTB assessment with multiple datasets variables can provide valuable insights for new researchers and the development of novel approaches for biomass/carbon estimation techniques in Nepal.

Crucial roles of the optimal time-scale of water condition on grassland biomass estimation on Qinghai–Tibet Plateau

The effect of the time-scale of water conditions on vegetation productivity has been widely studied by the academic community. However, the relationship between the time-scale of water conditions and the vegetation growth rhythm and the effect of this relationship on vegetation biomass estimation have rarely been discussed. Here, we analyzed the occurrence times of major phenological events on alpine grasslands using the widely distributed “site-dominant species” dataset and set a series of time-scales for accumulated precipitation and standardized precipitation evapotranspiration index based on phenological information. Then, we combined large-scale aboveground/belowground biomass datasets to evaluate the role of the optimal time-scale for water conditions in aboveground/belowground biomass estimation. The results showed that (1) the optimal time-scale for water conditions with the greatest effects on aboveground biomass was on the month before the end of flowering or the onset of fruit maturity. The optimal time-scale for water condition effects on belowground biomass was earlier and longer than that for the aboveground biomass. The optimal time-scales for accumulated precipitation and standardized precipitation evapotranspiration index effects on belowground biomass were at five months before the end of flowering or the beginning of fruit ripening and the three months before the first flowering, respectively. (2) The aboveground and belowground biomass were underestimated by 11 % and 9 %, respectively, when the water conditions at the optimal time-scales were ignored. (3) The interannual variability in aboveground/belowground biomass was more effectively captured by considering the optimal time-scales of water conditions, especially in water-restricted areas. Overall, this study indicated that terrestrial carbon cycle models should incorporate information on the lag-effects of the water conditions in previous periods. In the future, increasing the number of belowground biomass observations and conducting monthly belowground biomass monitoring sooner will be key to revealing the mechanisms of the belowground biomass response to climate change.

Estimating potato above-ground biomass by using integrated unmanned aerial system-based optical, structural, and textural canopy measurements

Rapid and non-destructive potato above ground biomass (AGB) monitoring is a crucial step in the development of smart agriculture because AGB is closely related to crop growth, yield, and quality. Compared to time-consuming and laborious field surveys, unmanned aerial vehicle (UAV) remote sensing provides a new direction for large-scale AGB monitoring. However, estimating AGB using an optical remote sensing technique usually does not work well because of spectral saturation, but multi-source remote sensing feature fusion (e.g., fusing spectral and structural features) can mitigate that problem. Due to potato crop canopy structure and AGB change greatly during growth, the potential of fusing optical, textural (TFs), and structural features (SFs) for calculating potato AGB at multiple growth stages was unknown. In addition, the ability of optical features, TFs, and SFs and their combinations to estimate potato AGB had not been examined. Vegetation indices (RGB-VIs), TFs, and SFs were extracted from ultra-high spatial resolution RGB images and compared their performances for estimating potato AGB with those of hyperspectral vegetation indices (H-VIs) obtained from UAV hyperspectral images. The results revealed that each type of feature had its own advantages and limitations for potato AGB estimation. Except for canopy volume (CV) in SFs, the best H-VI, RGB-VI, and TF for estimating AGB in both single growth stages and the entire growth period were inconsistent. When estimating AGB with only a single type of feature, the model accuracy in descending order was SFs, TFs, H-VIs, and RGB-VIs. The fusion of any two types of remote sensing features improved AGB estimation model accuracy. Among them, TFs combined with SFs provided the best estimation performance. The fusion of RGB-VIs, TFs, and SFs produced the best AGB estimates precision (R2 = 0.81, RMSE = 207 kg/hm2, NRMSE = 17.40%). Since AGB was effectively estimated under different treatments in the field, the model applicability was confirmed. Using different types of remote sensing features, the Gaussian process regression method produced better estimation results than the partial least squares regression method did. This study provides an economic and effective method for monitoring the potato growth in the field, and thus helps improve farmland production and guide fertilization management.

Allometric relationships between stem diameter, height and crown area of associated trees of cocoa agroforests of Ghana

Allometric models which are used to describe the structure of trees in agroforestry systems are usually extrapolated from models developed for trees in forest ecosystems. This makes quantitative assessment of the functions of shade trees in agroforestry systems challenging since increased availability of light and space in these systems may induce structural differences from those growing under forest conditions. We addressed this issue by providing species-specific allometric information on the structural characteristics of associated shade trees on cocoa agroforestry systems and assessed if allometries conformed to theoretical predictions. At the plot level, stand and soil characteristics affecting tree structural characteristics were assessed. The study was conducted in cocoa agroforestry systems at Suhum, Ghana. The height-diameter at breast height (H-DBH) allometry had the best fits (R2 = 53–89%), followed by the crown area (CA)-DBH allometry (R2 = 27–87%) and then the CA-H allometry (R2 = 22–73%). In general, the scaling exponents of the CA-DBH, H-CA and H-DBH allometries conformed to the metabolic scaling theory (MST). However, both the CA-DBH and H-DBH allometries diverged from the geometric similarity model. Though forest tree species had similar crown areas as fruit trees, they were slenderer than fruit trees. Tree slenderness coefficients were positively correlated with soil P, Ca, Cu and the ratios (Ca + Mg):K, (Ca + Mg):(K + Na) and Ca:Mg, but not C:N while DBH and H were correlated with soil P and C:N ratio. Our results show that critical soil nutrients and their ratios affects shade tree structural attributes (e.g. slenderness and CA), which possibly restrict variations in species-specific allometries to a narrow range on cocoa systems. Furthermore, shade tree species richness and density are better predictors of relative canopy projection area (a proxy for shade intensity) than tree species diversity. In conclusion, the results have implications for shade tree species selection, monitoring of woody biomass and maintenance of biodiversity.