This paper presents the results of an experimental investigation conducted on a compression ignition (CI) engine, modified to run on dual fuel mode, using biogas as a primary fuel and KME (Karanja methyl ester) as a pilot fuel. The biogas was produced by anaerobic digestion of Pongamia pinnata (Karanja) seed cakes. In dual fuel mode, the biogas was inducted at four different flow rates, viz. 0.3kg/h, 0.6kg/h, 0.9kg/h and 1.2kg/h through the intake manifold of the engine. The biogas flow rate of 0.9kg/h gave a better performance and lower emissions, than those of the other flow rates. The NO and smoke emissions were found to be lower by about 34% and 14%, than those of KME operation, at full load. The ignition delay was longer by about 1–2 °CA in the dual fuel operation, than that of KME at full load. The part load performance was found to be better in dual fuel operation, with reduced emissions of NO and smoke, in comparison with KME. The ignition delay at part load in dual fuel operation was also lower than that of KME operation.