Following a dramatic decline, the lesser kestrel Falco naumanni global population has recently stabilised, although it is still fluctuating in several countries, including Greece. Nestling growth rates and size at fledging greatly influence future survival and reproductive success, and therefore the study of postnatal growth can aid the understanding of population dynamics and the conservation of avian populations. We quantified body mass and morphological traits in female and male lesser kestrel nestlings from a lowland Greek breeding population. Nonlinear mixed models were used to describe and compare growth trajectories. Growth in body mass, tarsus and bill reached asymptotic values before fledging and was best described by the logistic equation, whereas total length grew linearly beyond the fledging phase. Random variation was found in the asymptote in body mass, the inflection point in body mass, tarsus and bill lengths and the intercept in total length, being substantially higher between nests than amongst siblings, implying differences in parental quality between nests and also an even distribution of parental care amongst siblings. Random effects were not observed on the growth rate constant, supporting the hypothesis that it varies little within populations. Females were significantly heavier and had longer bills and total length than males, whereas males were similar to females in tarsus growth. Nonlinear mixed models allowed us to describe a stage of avian life vital for future survival and reproductive output and reveal variation between nests, nestlings and the sexes.