Bicyclic Peroxy Radicals Research Articles

Theoretical Investigation on Reaction Mechanism and Kinetics of M-xylene Bicyclic Peroxy Radical with HO2

Theoretical Investigation on Reaction Mechanism and Kinetics of M-xylene Bicyclic Peroxy Radical with HO₂

Insights into the Peroxide-Bicyclic Intermediate Pathway of Aromatic Photooxidation: Experimental Yields and NOx-Dependency of Ring-Opening and Ring-Retaining Products.

Aromatic hydrocarbons are important contributors to the formation of ozone and secondary organic aerosols in urban environments. The different parallel pathways in aromatic oxidation, however, remain inadequately understood. Here, we investigated the production yields and chemical distributions of gas-phase tracer products during the photooxidation of alkylbenzenes at atmospheric OH levels with NOx present using high-resolution mass spectrometers. The peroxide-bicyclic intermediate pathway emerged as the major pathway in aromatic oxidation, accounting for 52.1 ± 12.6%, 66.1 ± 16.6%, and 81.4 ± 24.3% of the total OH oxidation of toluene, m-xylene, and 1,3,5-trimethylbenzene, respectively. Notably, the yields of bicyclic nitrates produced from the reactions of bicyclic peroxy radicals (BPRs) with NO were considerably lower (3-5 times) than what the current mechanism predicted. Alongside traditional ring-opening products formed through the bicyclic pathway (dicarbonyls and furanones), we identified a significant proportion of carbonyl olefinic acids generated via the 1,5-aldehydic H-shift occurring in subsequent reactions of BPRs + NO, contributing 4-7% of the carbon flow in aromatic oxidation. Moreover, the observed NOx-dependencies of ring-opening and ring-retaining product yields provide insights into the competitive nature of reactions involving BPRs with NO, HO2, and RO2, which determine the refined product distributions and offer an explanation for the discrepancies between the experimental and model-based results.

Theoretical investigation on the mechanism and kinetics of the OH•‒initiated atmospheric degradation of p-chloroaniline: Addition of [formula omitted] and isomerization of peroxy radicals

Atmospheric oxidation of the p-chloroaniline-OH• adduct [C6H4ClNH2–OH]• (AD-C2) by ∑g−3O2 and internal isomerization processes of peroxy radical [C6H4ClNH2–OH]•-O2 are theoretically investigated at the M06-2X/aug-cc-pVTZ and CBS-QB3//M06-2X/aug-cc-pVTZ level of theories. Potential energy surfaces (PESs) for the most efficient pathways indicated that the oxidation process begins via the complexation of individual reactants in syn mode forming PRCy-iOO-syn (y = 2,5) in an exothermic and endogenic step. The syn mode addition is favored over the anti one due to the formation of internal hydrogen bond between the hydroxyl and peroxy groups. Formation of new C5–OO bond in PRCy-iOO-syn complex is an unimolecular process which is exothermic and exoergic. This pathway is predominated over other internal conversions due to the presence of stronger intramolecular hydrogen bond. Cyclization of the produced [C6H4ClNH2–OH]•-O2 peroxy radical AD-C2-5OO-syn into the bicyclic peroxy radical AD-C2-5,6OO-syn is the last step which is strongly endothermic and endogenic. The rate coefficients are calculated by means of the RRKM theory over the temperature range 250–350 K and at a pressure range of 0.1 bar to the high-pressure limit. The RRKM rate coefficients at the M06-2X/aug-cc-pVTZ level for the first bimolecular and last unimolecular steps are in order of 10−16 cm3 molecule−1 s−1 and 10−7 s−1, respectively, while the obtained rate coefficients at the CBS-QB3//M06-2X/aug-cc-pVTZ are overestimated about two order of magnitude.

DFT Insight into the Kinetics and Mechanism of OH⋅‐Initiated Atmospheric Oxidation of Catechol: Addition of 3∑g− O2 and Isomerization of Peroxy Radicals

AbstractAtmospheric oxidation mechanism of predominant catechol‐OH adduct [C6H6O2−OH]⋅ (AD2) by oxygen molecule in its triplet electronic ground state and isomerization processes of catechol peroxy radicals [C6H6O2−OH]⋅−O2 into bicyclic peroxy radicals have been studied at the M06‐2X/aug‐cc‐pVTZ level in conjugation with the RRKM theory. The first step begins via the complexation of [C6H6O2−OH]⋅ with oxygen molecule and formation of two pre‐reactive van der Waals complexes in syn and anti modes. Syn mode addition of O2 is more favorable over the anti mode due to the formation of intramolecular hydrogen bond. Kinetically and thermodynamically, addition of O2 at the C5 position in syn mode, namely peroxy radical AD2‐5OO‐syn, is the most efficient process with bimolecular RRKM rate coefficient 2.80×10−16 cm3 molecule−1 s−1 at ambient conditions. Isomerization (cyclization) of peroxy radical AD2‐5OO‐syn into bicyclic peroxy radicals via the formation of −OO− bridge are strongly endothermic and nonspontaneous processes with high activation energies. Ring closure into the bicyclic peroxy radical AD2‐5,6OO‐syn is the most favorable process with unimolecular RRKM rate coefficient 1.41×10−8 s−1 at ambient conditions.

Molecular rearrangement of bicyclic peroxy radicals is a key route to aerosol from aromatics

The oxidation of aromatics contributes significantly to the formation of atmospheric aerosol. Using toluene as an example, we demonstrate the existence of a molecular rearrangement channel in the oxidation mechanism. Based on both flow reactor experiments and quantum chemical calculations, we show that the bicyclic peroxy radicals (BPRs) formed in OH-initiated aromatic oxidation are much less stable than previously thought, and in the case of the toluene derived ipso-BPRs, lead to aerosol-forming low-volatility products with up to 9 oxygen atoms on sub-second timescales. Similar results are predicted for ipso-BPRs formed from many other aromatic compounds. This reaction class is likely a key route for atmospheric aerosol formation, and including the molecular rearrangement of BPRs may be vital for accurate chemical modeling of the atmosphere.

Molecular rearrangement of bicyclic peroxy radicals: key route to aerosol from aromatics

Molecular rearrangement of bicyclic peroxy radicals: key route to aerosol from aromatics

Molecular rearrangement of bicyclic peroxy radicals: key route to aerosol from aromatics

Molecular rearrangement of bicyclic peroxy radicals: key route to aerosol from aromatics

Direct observation of the particle-phase bicyclic products from OH-initiated oxidation of 1,3,5-trimethylbenzene under NOx-free conditions

The OH initiated oxidation of 1,3,5-trimethylbenzene (1,3,5-TMB) under NOx-free conditions has been investigated by using a home-made vacuum ultraviolet (VUV) photoionization aerosol mass spectrometer complemented by high-level theoretical computations. The chemical composition of the nascent particles from the oxidation reaction is measured on-line and the high mass O2-bridged bicyclic compounds in the particle phase are directly observed and determined, with the aid of the deuterated 1,3,5-TMB experiments to confirm the species’ assignment. To illuminate the formation of the O2-bridged bicyclic compounds, the potential energy surfaces of the reaction of the bicyclic peroxy radical (BPR) with the hydroperoxy radical (HO2), and of the self-reaction of the BPR radical, have been theoretically calculated and then their reaction mechanisms are discussed in detail. This study provides direct evidence to support the essential role of the O2-bridged bicyclic compounds in the particle formation from the OH initiated oxidation of 1,3,5-TMB.

Water Significantly Changes the Ring-Cleavage Process During Aqueous Photooxidation of Toluene.

As a major constituent of aromatic compounds, toluene exists widely in environmental aqueous phases. This research investigated the aqueous-phase OH oxidation of toluene to determine how liquid water changes the radical chemistry of ring-cleavage pathways. Results show that ring-cleavage pathways through the C7 bicyclic peroxy radical (BPR) account for about 70% of total aqueous-phase oxidation pathways, which is similar to that in the gas-phase oxidation. However, detailed ring-cleavage pathways in the aqueous phase change significantly compared with those in the gas phase as shown by the decreased production of glyoxal and methylglyoxal and the enhanced production of formic acid and acetic acid as primary products, which can be attributed to the presence of liquid water. Water facilitates the formation of the BPR whose structure is different from that in the gas-phase oxidation and results in different ring-cleavage pathways through hydrogen-shift reactions. Furthermore, water helps the hydration of acyl radicals formed by the BPR to produce organic acids. With the suggested ring-cleavage mechanisms, a box model can simulate aqueous-phase product distributions better than that with the classical ring-cleavage mechanisms. Given the influence of water on reaction mechanisms, aqueous-phase oxidation of hydrophobic organic compounds may be more important than previously assumed.

New Insights into the Radical Chemistry and Product Distribution in the OH-Initiated Oxidation of Benzene.

Emissions of aromatic compounds cause air pollution and detrimental health effects. Here, we explore the reaction kinetics and products of key radicals in benzene photo-oxidation. After initial OH addition and reaction with O2, the effective production rates of phenol and bicyclic peroxy radical (BCP-peroxy) are experimentally constrained at 295 K to be 420 ± 80 and 370 ± 70 s-1, respectively. These rates lead to approximately 53% yield for phenol and 47% yield for BCP-peroxy under atmospheric conditions. The reaction of BCP-peroxy with NO produces bicyclic hydroxy nitrate with a branching ratio <0.2%, indicating efficient NOx recycling. Similarly, the reaction of BCP-peroxy with HO2 largely recycles HOx, producing the corresponding bicyclic alkoxy radical (BCP-oxy). Because of the presence of C-C double bonds and multiple functional groups, the chemistry of BCP-oxy and other alkoxy radicals in the system is diverse. Experimental results suggest the aldehydic H-shift and ring-closure to produce an epoxide functionality could be competitive with classic decomposition of alkoxy radicals. These reactions are potential sources of highly oxygenated molecules. Finally, despite the large number of compounds observed in our study, we are unable to account for ∼20% of the carbon flow.

Simulated kinetics of the atmospheric removal of aniline during daytime

Oxidations of aniline (AN) initiated by OH-radicals are simulated in the temperature range 200–400 K using DFT/M06-2X/6-311++G(2df,2p) and ab initio ROCBS-QB3 levels. Chemical kinetics of such reactions were investigated based on several approaches including classical transition state theory (TST), conical variational transition state theory (CVT), and Rice-Ramsperger-Kassel-Marcus master equation (RRKM-ME) theories. Under atmospheric conditions, the reaction of OH radical with AN and the subsequent reactions with O2 molecules are investigated. The results indicate that the majority of O2 addition goes to the anti-directions with a branching ratio of 97.7% and produces the bicyclic peroxy radicals (BPRs) that can react with NO radical to form bicyclic alkoxy radicals (BARs). The latter compounds can be stabilized either by cyclization or via ring cleavage.

Mechanism and kinetics of the atmospheric reaction of 1,3,5-trimethylbenzene bicyclic peroxy radical with OH.

The bicyclic peroxy radical (BPR) is the key intermediate during atmospheric oxidation of aromatics. In this paper, the reaction mechanisms and kinetics of the atmospheric reaction of the 1,3,5-trimethylbenzene (1,3,5-TMB) BPR with the OH radical were studied by density functional theory (DFT) and conventional transition-state theory (CTST) calculations. The product channels of formation of the 1,3,5-TMB trioxide (ROOOH), OH-adducts and Criegee intermediate (CI) have been identified, and the geometries and energies of all the stationary points were calculated at the M08-HX/6-311 + g(2df,2p) level of theory. In addition, the rate constants for the individual reaction pathway at 298 K were calculated. The results showed that OH addition reactions including the formation of ROOOH and OH-adducts are the main pathways, whereas Criegee intermediate formation is of minor importance.

Formation of Highly Oxidized Radicals and Multifunctional Products from the Atmospheric Oxidation of Alkylbenzenes

Aromatic hydrocarbons contribute significantly to tropospheric ozone and secondary organic aerosols (SOA). Despite large efforts in elucidating the formation mechanism of aromatic-derived SOA, current models still substantially underestimate the SOA yields when comparing to field measurements. Here we present a new, up to now undiscovered pathway for the formation of highly oxidized products from the OH-initiated oxidation of alkyl benzenes based on theoretical and experimental investigations. We propose that unimolecular H-migration followed by O2-addition, a so-called autoxidation step, can take place in bicyclic peroxy radicals (BPRs), which are important intermediates of the OH-initiated oxidation of aromatic compounds. These autoxidation steps lead to the formation of highly oxidized multifunctional compounds (HOMs), which are able to form SOA. Our theoretical calculations suggest that the intramolecular H-migration in BPRs of substituted benzenes could be fast enough to compete with bimolecular reactions with HO2 radicals or NO under atmospheric conditions. The theoretical findings are experimentally supported by flow tube studies using chemical ionization mass spectrometry to detect the highly oxidized peroxy radical intermediates and closed-shell products. This new unimolecular BPR route to form HOMs in the gas phase enhances our understanding of the aromatic oxidation mechanism, and contributes significantly to a better understanding of aromatic-derived SOA in urban areas.

The atmospheric oxidation mechanism and kinetics of 1,3,5-trimethylbenzene initiated by OH radicals – a theoretical study

The atmospheric fate of 1,3,5-trimethylbenzene is determined by OH-radical addition, and subsequent bicyclic peroxy radical ring closure and ring breaking pathways.

Reaction mechanisms and kinetics of the isomerization processes of naphthalene peroxy radicals

The isomerization processes of naphthalene peroxy radicals [C10H8–OH]–O2 into bicyclic peroxy or oxy hydroperoxide radicals via ring closure and intramolecular hydrogen transfers have been studied computationally using density functional theory, along with various exchange–correlation functionals and an extremely large basis set. The calculated energy profiles have been supplemented with calculations of kinetic rate constants under atmospheric pressure and in the fall-off regime, using transition state theory (TST) and statistical Rice–Ramsperger–Kassel–Marcus (RRKM) theory. The cyclization of the R1-2OO-syn peroxy radical into the R1-2,9OO-syn bicyclic peroxy radical through formation of an O–O bridge is endothermic and reversible. Both from a thermodynamic and kinetic view points, the two most favorable processes for the R1-2OO-syn peroxy radical are ring closure into the R1-2,9OO-syn bicyclic peroxy radical species, and conversion through hydrogen transfer into the R1-P2O1-syn oxy hydroperoxide radical. Among all studied reaction channels, the latter process is the kinetically most competitive one. Also, in view of the computed rate constants, the R1-2OO-syn peroxy radical appears to be chemically much more reactive than the R1-4OO-syn species. All in all, the atmospheric oxidation mechanisms of naphthalene appear at this reaction stage to be quite different from that of benzene and its derivatives.

The Atmospheric Oxidation Mechanism of &lt;i&gt;o&lt;/i&gt;-Xylene Initiated by Hydroxyl Radicals

The atmospheric oxidation mechanism of o-xylene(oX) initiated by hydroxyl(OH) radicals has been investigated by using quantum chemistry,transition state theory,and unimolecular theory(RRKMME) calculations.Molecular structures of reactants,transition states,and products are optimized at M06-2X/6-311++G(2df,2p) level,and the electronic energies are calculated at the ROCBS-QB3 level.The classical transition state theory is employed to predict the rates or rate constants for all the reaction steps as well as the branching ratios of the reaction pathways.RRKM-ME calculations are employed to explore the pressure-dependence of the reaction kinetics.Under atmospheric conditions,the oxidation of o-xylene is dominated by OH addition to the C_1 and C_3 positions,forming adducts oX-1-OH(R1) and oX-3-OH(R3),which will readily react with atmospheric oxygen.The reactions of R1 and R3 with O_2 can proceed by irreversible H-abstraction to dimethylphenols(R3 only),or by reversible addition to form bicyclic radicals,which recombine with atmospheric oxygen to form bicyclic peroxy radicals(BPRs).BPRs will react with NO and/or HO_2 in the atmosphere,forming organonitrate,hydroperoxides(ROOH),and bicyclic alkoxy radicals(BARs),of which the BARs eventually transfer to the final products,including biacetyl,butenedial,methylglyoxal,4-oxo-2-pentenal,epoxy-2,3-butenedial,and a small amount of glyoxal.The products ROOH and methylglyoxal are considered to contribute to the formation of secondary organic aerosols.A new oxidation mechanism of oX in the atmosphere is proposed,based on the current theoretical predictions and previous experimental measurements,and the predicted product yields under high NO conditions are compared with previous experimental measurements.The effect of temperature on the oxidation mechanism is also discussed.

Atmospheric oxidation mechanism of m-xylene initiated by OH radical.

The atmospheric oxidation mechanism of m-xylene (mX) initiated by the OH radical is investigated at M06-2X and ROCBS-QB3 levels, coupled with reaction kinetics calculations by using transition state theory and unimolecular RRKM-ME theory. The calculations show that the reaction between OH and mX is dominated by OH addition to the C2 and C4 positions, forming adducts mX-2-OH (R2) and mX-4-OH (R4). In the atmosphere, R2 and R4 react with O2 by irreversible H-abstraction to dimethylphenols or by reversible additions to bicyclic radical intermediates, which would recombine again with O2 to form bicyclic peroxy radicals, to bicyclic alkoxyl radicals by reacting with NO or HO2, and eventually to final products such as glyoxal, methylglyoxal, and their coproducts. The effects of reaction pressure and temperature are explored by RRKM-ME calculations. A mechanism at 298 K is proposed on the basis of current predictions and previous experimental and modeling results. The predicted product yields support the values in the SAPRC mechanism, even though the predicted yield of 1.0% for glyoxal is lower than the value of ∼11% from the experimental measurements.

The atmospheric oxidation mechanism of 1,2,4-trimethylbenzene initiated by OH radicals.

The atmospheric oxidation mechanism of 1,2,4-trimethylbenzene (1,2,4-TMB) initiated by OH radicals is investigated using quantum chemistry calculations at M06-2X and ROCBS-QB3 levels. The calculations show that the initiation of the reaction is dominated by OH addition to C1, C3 and C5 to form 1,2,4-TMB-OH adducts R1, R3, and R5 with branching ratios of 0.22, 0.19, and 0.38, respectively, using ROCBS-QB3 energies. In the troposphere, the adducts react with O2 by irreversible H-abstraction to form phenolic compounds and by reversible addition to TMB-OH-O2 peroxy radicals, which will cyclize to bicyclic radicals, similar to those in benzene, toluene, and xylenes. The bicyclic radicals can further recombine with O2 to generate bicyclic peroxy and alkoxyl radicals. The bicyclic alkoxyl radicals would break the ring directly to form 1,2-dicarbonyl products and unsaturated 1,4-dicarbonyl co-products, or undergo another cyclization to form an epoxy group, followed by the ring-breakage to form 1,2-dicarbonyl products and epoxy-1,4-dicarbonyl co-products. The predicted yields of products agree reasonably with the previous experimental measurements, while considerable discrepancies also exist for the yields of nitrates, biacetyl, 4-oxo-2-pentenal, and butenedial, etc. Our mechanism also predicts a new type of epoxy-1,4-dicarbonyl compounds with a total yield of ∼0.32. The epoxy-1,4-dicarbonyl compounds have not been suggested or reported in previous studies.

Kinetics Study of the Aromatic Bicyclic Peroxy Radical + NO Reaction: Overall Rate Constant and Nitrate Product Yield Measurements

The measurements of the overall bicyclic peroxy radical + NO rate constant for the 1,3,5-trimethylbenzene (1,3,5-TMB) system and of the nitrate product yields for the benzene, toluene, p-xylene, and 1,3,5-TMB systems were performed via the turbulent flow chemical ionization mass spectrometry technique. While the overall rate constant was found to be consistent with the value used in the most detailed aromatic oxidation kinetic model (Master Chemical Mechanism, MCM), the nitrate product yields were found to be generally lower than predicted by the MCM and to have a different aromatic species-specific dependence than the MCM predicts.

Comprehensive NO-Dependent Study of the Products of the Oxidation of Atmospherically Relevant Aromatic Compounds

A comprehensive product study, performed via the turbulent flow chemical ionization mass spectrometry (TF-CIMS) technique, of the primary OH-initiated oxidation of many of the atmospherically abundant aromatic compounds was performed. The bicyclic peroxy radical intermediate, a key proposed intermediate species in the Master Chemical Mechanism (MCM) for the atmospheric oxidation of aromatics, was detected in all cases, as were stable bicyclic species. The NO product yield dependences suggest a potential role for bicyclic peroxy radical + HO(2) reactions at high HO(2)/NO ratios, which are postulated to be a possible source of the inconsistencies between previous environmental chamber results and predictions from the MCM for ozone production and OH reactivity. The TF-CIMS product yield results are also compared to previous environment chamber results and to the latest MCM parametrization.