Beta Region Research Articles

Mosaicism in the alpha-like protein genes of group B streptococci

Members of a family of repeat-containing surface proteins of group B streptococci (GBS) defined by the alpha C and Rib proteins exhibit size variability and cross-reactivity and have been studied as potential vaccine components. We report evidence of horizontal DNA transfer with subsequent recombination as a mechanism generating diversity within this antigen family. Alp2 and Alp3 are additional members of the alpha C protein family identified in strains of the emerging GBS serotypes V and VIII. Each contains an overall genetic organization highly similar to that of the alpha C and Rib proteins, including a tandem repeat region and conserved N- and C-terminal regions. Among different strains, protein size varies according to the number of tandem repeats within the corresponding gene. Unlike the alpha C and Rib proteins, however, the newly described alpha-like proteins contain other regions, including one similar to the IgA-binding region of the GBS beta C protein, a nontandem repeat region, and an isolated repeat highly homologous to the alpha C repeat. Sequence analysis of the regions flanking the alpha C protein gene on a 13.7-kb insert reveals several ORFs that are likely to be involved in basic metabolic pathways. Analysis of corresponding flanking regions in other GBS strains, including the parent strains of the newly described alpha-like proteins, shows striking conservation among all strains studied. These findings indicate that the alpha-like proteins are encoded by mosaic variants at a single genomic locus and suggest that recombination after horizontal DNA transfer is a means of generating diversity within this protein family.

Mutational Analysis of β′260–309, a ς70 Binding Site Located on Escherichia coliCore RNA Polymerase

In eubacteria, the final sigma subunit binds to the core RNA polymerase and directs transcription initiation from any of its cognate set of promoters. Previously, our laboratory defined a region of the beta' subunit that interacts with final sigma(70) in vitro. This region of beta' contained heptad repeat motifs indicative of coiled coils. In this work, we used 10 single point mutations of the predicted coiled coils, located within residues 260-309 of beta', to look at disruption of the final sigma(70)-core interaction. Several of the mutants were defective for binding final sigma(70) in vitro. Of these mutants, three (R275Q, E295K, and A302D) caused cells to be inviable in an in vivo assay in which the mutant beta' is the sole source of beta' subunit for the cell. All of the mutants were able to assemble into the core enzyme; however, R275Q, E295K, A302D were defective for Efinal sigma(70) holoenzyme formation. Several of the mutants were also defective for holoenzyme assembly with various minor final sigma factors. In the recently published crystal structure of Thermus aquaticus core RNA polymerase (Zhang, G., Campbell, E. A., Minakhin, L., Richter, C., Severinov, K. , and Darst, S. A. (1999) Cell 98, 811-824), the region homologous to beta'(260-309) of Escherichia coli forms a coiled coil. Modeling of our mutations onto that coiled coil places the most defective mutations on one face of the coiled coil.

Direct capillary electrophoretic detection of carbohydrate-deficient transferrin in neat serum.

Transferrin, an iron transport protein found in serum and cerebrospinal fluid, is known to be microheterogeneous with respect to its carbohydrate and sialic acid content. The forms of transferrin deficient in sialic acid and/or carbohydrate, termed carbohydrate-deficient transferrin (CDT), have been of clinical interest for almost two decades as a result of the initial finding that elevated CDT concentrations are associated with chronic, excessive alcohol abuse. We demonstrate the utility of capillary electrophoresis for examining the CDT sialoform profile via the direct electrophoresis of serum. The need for negligible preelectrophoresis sample preparation and absence of postelectrophoresis processing dramatically decreases analysis time compared to slab gel-based separations. Using a fluorocarbon-coated capillary containing a hydroxyethyl cellulose/borate buffer, the high resolution separation of serum components is effected in less than 30 min. Under these conditions, the beta region proteins (including transferrin) are well resolved from the alpha-2 and gamma zone proteins in a window where the individual transferrin sialoforms can be detected. The usefulness of this method is demonstrated with the electrophoresis of serum from subjects known to be either non-alcoholic and alcoholic.

Direct capillary electrophoretic detection of carbohydrate-deficient transferrin in neat serum

Transferrin, an iron transport protein found in serum and cerebrospinal fluid, is known to be microheterogeneous with respect to its carbohydrate and sialic acid content. The forms of transferrin deficient in sialic acid and/or carbohydrate, termed carbohydrate-deficient transferrin (CDT), have been of clinical interest for almost two decades as a result of the initial finding that elevated CDT concentrations are associated with chronic, excessive alcohol abuse. We demonstrate the utility of capillary electrophoresis for examining the CDT sialoform profile via the direct electrophoresis of serum. The need for negligible preelectrophoresis sample preparation and absence of postelectrophoresis processing dramatically decreases analysis time compared to slab gel-based separations. Using a fluorocarbon-coated capillary containing a hydroxyethyl cellulose/borate buffer, the high resolution separation of serum components is effected in less than 30 min. Under these conditions, the beta region proteins (including transferrin) are well resolved from the alpha-2 and gamma zone proteins in a window where the individual transferrin sialoforms can be detected. The usefulness of this method is demonstrated with the electrophoresis of serum from subjects known to be either nonalcoholic and alcoholic.

Crystal structure of a Staphylococcus aureus protein A domain complexed with the Fab fragment of a human IgM antibody: structural basis for recognition of B-cell receptors and superantigen activity.

Staphylococcus aureus produces a virulence factor, protein A (SpA), that contains five homologous Ig-binding domains. The interactions of SpA with the Fab region of membrane-anchored Igs can stimulate a large fraction of B cells, contributing to lymphocyte clonal selection. To understand the molecular basis for this activity, we have solved the crystal structure of the complex between domain D of SpA and the Fab fragment of a human IgM antibody to 2.7-A resolution. In the complex, helices II and III of domain D interact with the variable region of the Fab heavy chain (V(H)) through framework residues, without the involvement of the hypervariable regions implicated in antigen recognition. The contact residues are highly conserved in human V(H)3 antibodies but not in other families. The contact residues from domain D also are conserved among all SpA Ig-binding domains, suggesting that each could bind in a similar manner. Features of this interaction parallel those reported for staphylococcal enterotoxins that are superantigens for many T cells. The structural homology between Ig V(H) regions and the T-cell receptor V(beta) regions facilitates their comparison, and both types of interactions involve lymphocyte receptor surface remote from the antigen binding site. However, T-cell superantigens reportedly interact through hydrogen bonds with T-cell receptor V(beta) backbone atoms in a primary sequence-independent manner, whereas SpA relies on a sequence-restricted conformational binding with residue side chains, suggesting that this common bacterial pathogen has adopted distinct molecular recognition strategies for affecting large sets of B and T lymphocytes.

Effect of interleukin‐1 gene polymorphisms on gingival inflammation assessed by bleeding on probing in a periodontal maintenance population

Bleeding on probing (BOP) is the most significant clinical parameter for the assessment of periodontal inflammation. The aim of this prospective longitudinal trial was to study the association between allelic variants of the IL-1 gene complex and gingival inflammation. Three hundred and twenty-three randomly selected periodontal maintenance patients (64.4% females) received a periodontal examination that included probing depth measurements and BOP at each of 4 supportive periodontal therapy (SPT) appointments. A blood sample taken from each subject was analysed for the presence of specific allotypes of the IL-1 gene complex. Two polymorphisms located at +4845 bp in the IL-1 alpha region and at +3954 bp in the IL-1 beta region were evaluated by a polymerase chain reaction method; 35.3% of the examined subjects were positive for specific combinations of allotypes of the IL-1 gene complex previously associated with an increased risk for severe periodontitis. The population consisted of 90 current smokers and 94 former smokers. An analysis of the association between the IL-1 genotype and BOP in the whole population (including smokers) did not reach statistical significance because of the overriding effect of smoking. A subset analysis of the 139 never smokers indicated that genotype positive patients had a significantly elevated chance of presenting an increase in the BOP% over a 4-appointment recall period (p = 0.03) after correcting for oral hygiene. In fact, patients who were genotype-negative had a 50% smaller chance of showing increases in BOP% during SPT. A further analysis explored the relationship between the genotype and the level of BOP% at the most recent recall visit. A generalized linear model showed a statistically significant effect of the genotype status after correcting for plaque accumulation and prevalence of residual pockets (> or = 5 mm). Genotype-negative subjects had significantly lower BOP% (p = 0.0097). It is concluded that the increased BOP prevalence and incidence observed in IL-1 genotype-positive subjects indicates that some individuals have a genetically determined hyper-inflammatory response that is expressed in the clinical response of the periodontal tissues.

A Search for Broad Infrared Recombination Lines in NGC 1068

We report infrared spectroscopy of the prototypical Seyfert 2 galaxy NGC 1068, aiming at detection of broad components of hydrogen recombination lines that originate in the obscured broad-line region. Using the Short Wavelength Spectrometer on board the Infrared Space Observatory, we have observed for the first time the regions of Brackett beta 2.626um and Pfund alpha 7.460um, and present improved data for Brackett alpha 4.052um. No significant broad components are detected, implying an equivalent visual extinction to the broad-line region of at least 50 magnitudes and an obscuring column density of at least 10^23 cm^-2. While consistent with a highly obscured broad-line region, as required by the classical unified scenario, these limits are not yet significant enough to discriminate strongly between different torus models or to constrain properties of the gas causing the very large X-ray obscuration. We discuss the systematic limitations of infrared broad-line region searches and suggest that Brackett alpha may often be the most favorable transition for future searches.

The primary structure of the subunit in Bacillus thermoamyloliquefaciens KP1071 molecular weight 540,000 homohexameric alpha-glucosidase II belonging to the glycosyl hydrolase family 31.

The gene that coded for the subunit of an molecular weight (Mr) 540,000 homohexameric alpha-glucosidase II (alpha-D-glucoside glucohydrolase, EC 3.2.1.20) produced by Bacillus thermoamyloliquefaciens KP1071 (FERM-P8477) growing at 30 to 66 degrees C was expressed in Escherichia coli HB101. The resulting homohexameric enzyme had a half-life of 10 min at 80 degrees C. Its purification and characterization showed that the enzyme was identical with the native one except for the latter deleting 7 N-terminal residues found in the former. The primary sequence of the subunit with 787 residues and an Mr of 91,070 deduced from the gene was 24-34% identical to the corresponding sequences of 15 alpha-glucosidases in the glycosyl hydrolase family 31 from 14 eukaryotic origins and the archaeon Sulfolobus solfataricus 98/2. From the sequence analysis by the neural network method of Rost and Sander [Rost, B. and Sander, C., Proteins: Struct. Funct. Genet., 19, 55-72 (1994)], we inferred that alpha-glucosidase II might make each subunit of 3 secondary structural regions, i.e., one N-terminal beta region, one central alpha/beta region with two catalytic residues Asp407 and Asp484, and one C-terminal beta region.

Change in backbone torsion angle distribution on protein folding

Understanding protein folding requires the determination of the configurational space accessible to the protein at different stages in folding. Here, computer simulation analysis of small angle neutron scattering results is used to probe the change in the distribution of configurations on strong denaturation of a globular protein, phosphoglycerate kinase, in 4 M guanidine hydrochloride solution. To do this atomic-detail ensembles of the unfolded protein chain are modeled and their scattering profiles compared with the experiment. The local conformational statistics are found to strongly influence the experimental intensity at scattering vectors between 0.05 and 0.3 A(-1). Denaturation leads to a reduction in the protein atom-pair distance distribution function over the approximately 3-15 A region that is associated with a quantifiable shift in the backbone torsional angle (phi, psi) distribution toward the beta region of the Ramachandran plot.

Mirror mode structures and ELF plasma waves in the Giacobini-Zinner magnetosheath

Abstract. We show evidence for mirror mode structures at comet Giacobini-Zinner. These are plasma structures with alternating high ß and low ß regions driven unstable when ß<perp> /ß<parallel> > 1+ 1/<perp>. These structures are detected in a region just adjacent to the magnetic tail and have scale sizes of ≈ 12 H2O group ion cyclotron radii. Calculations are presented to show that mirror mode instability can occur due to the perpendicular pressure associated with H2O+ cometary pickup ions in the region of mirror mode observation. Adjacent regions (in the magnetic tail and further in the sheath) are found to be stable to the mirror mode. Plasma waves are detected in relation with the mirror mode structures. Low frequency 56 to 100 Hz waves are present in the high beta portions, and high frequency, 311 Hz to 10 kHz, waves are present in low beta regions. These may be electromagnetic lion roar waves and electrostatic festoon-shaped waves, respectively, in analogy to plasma waves detected in the Earth's magnetosheath.

Molecular dynamics simulations of polypeptide conformations in water: A comparison of ?, ?, and poly(pro)II conformations

A significant fraction of the so-called "random coil" residues in globular proteins exists in the left-handed poly(Pro)II conformation. In order to compare the behavior of this secondary structure with that of the other regular secondary structures, molecular dynamics simulations, with the GROMOS suite of programs, of an alanine octapeptide in water, in alpha-helix, beta-strand, and left-handed poly(Pro)II conformations, have been performed. Our results indicate a limited flexibility for the alpha-helix conformation and a relatively larger flexibility for the beta-strand and poly(Pro)II conformations. The behavior of oligopeptides with a starting configuration of beta-strand and poly(Pro)II conformations, both lacking interchain hydrogen bonds, were similar. The (phi, psi) angles reflect a continuum of structures including both beta and P(II) conformations, but with a preference for local P(II) regions. Differences in the network of water molecules involved in hydrogen bonding with the backbone of the polypeptide were observed in local regions of beta and P(II) conformations. Such water bridges help stabilize the P(II) conformation relative to the beta conformation. Proteins 1999;36:400-406.

Lack of mutations in DNA polymerase beta of estradiol-induced hamster kidney tumors: sequence of hamster DNA polymerase beta cDNA.

We examined the effects of estradiol (E2), the natural estrogenic hormone, on the structure and expression of DNA polymerase beta (DNA pol beta), a DNA repair gene, from E2-induced primary kidney tumors of twelve Syrian hamsters, their metastases, and from kidney tissues surrounding the tumors. We sequenced the coding region of the hamster DNA pol beta and found it to differ from that of the human by 11%. No mutations were detected in the entire coding region including the catalytic domain of the DNA pol beta from E2-induced primary kidney tumors, their metastases, or from kidney tissues surrounding the tumors. The expression of the DNA pol beta mRNA was also not significantly altered in E2-induced kidney tumors or in kidney tissues surrounding the tumors compared to that of control kidney tissues. These results suggest that mutations in the DNA pol beta gene may not be involved in the induction or malignant progression of hamster kidney tumors induced by E2. The nucleotide sequence of the hamster DNA pol beta described here will be useful for the study of the structure and expression of this gene.

The Global Distribution of Wrinkle Ridges on Venus

New digital mapping of over 65,000 wrinkle ridges of the plains of Venus shows a strong correlation between the location and orientation of these long, low-amplitude compressive anticlines and major features of the geoid and long-wavelength topography. Regions with wrinkle ridges occupy 43% of the plains and are strongly skewed toward low elevations and negative geoid anomalies. About 93% of the wrinkle ridge plains lie below mean planetary radius and 72% have negative geoid anomalies. In contrast, the extensional rift zones of Venus are strongly skewed toward high elevations and positive geoid anomalies. Thus compressive deformation dominates the topographic and geoid lows, whereas extensional rifting is generally restricted to the highs. These observations are consistent with geoid-based stress models that predict compression in geoid lows and extension in geoid highs. The orientations of wrinkle ridges are generally consistent over regions extending for 1000–10,000 km. Many regions have multiple sets of wrinkle ridges of different orientations reflecting multiple episodes and directions of compression; however, about 80% of the regions display a single dominant wrinkle ridge orientation, with secondary orientations subordinate. The dominant wrinkle ridge orientations in many regions follow the contours of long-wavelength topography and geoid or lie along the axes of troughs in the geoid. Thus the maximum horizontal compression recorded by the folds is commonly parallel to the present-day gradient in geoid and topography, although some regions are strong exceptions, perhaps reflecting changes in topography and geoid with time. The dominant wrinkle ridge trends ring several major geoid and topographic swells, especially Western Aphrodite Terra and Lada Terra, with ring diameters of 75–120° (8000–13,000 km). In addition there are smaller rings of wrinkle ridges around the swells in Themis, Eistla, and Bell regiones, especially Gula Mons, with ring diameters of 25–45° (2500–5000 km). In contrast, there are no rings of compressive deformation surrounding some other geoid/topographic highs, including Beta and Atla regiones, which have been proposed to be the youngest swells and display the largest peak geoid/topography ratios and largest geoid gradients. These observations are consistent with the idea that not all the major topographic/geoid swells existed on Venus at the time of wrinkle ridge formation.

Properties of He+ beams observed by Geotail in the lobe/mantle regions: Comparison with O+ beams

In the lobe/mantle regions of Earth's magnetotail (<210 RE), the Geotail spacecraft sometimes observed multicomposition ion flows consisting of both ionospheric (H+/He+/O+) and solar wind (H+/He++) ions. Statistics on the He+ beams show that they were observed under similar conditions to those of the O+ beams reported previously. Namely, the heavy ion beams of ionospheric origin tend to exist during geomagnetically active periods in the mantle‐like regions of high plasma beta, where ions of solar wind origin are the major component. The total duration of identified He+ events amounts to 3% of the total observation time in the lobe/mantle region, while that of O+ events amounts to 13%. A remarkable point is that on a short timescale, the He+ and O+ beams often appear to exist nearly exclusively. That is to say, their densities sometimes vary in an opposite sense, even when He+ and O+ coexist. If the O+ and He+ ions are given the same energy in a source region, the initial distribution function of He+ has twice the peak velocity of that of O+, and their alternating appearance and density anticorrelation in the lobe/mantle are easily explained due to the velocity filter effect. Thus the anticorrelation of their densities may suggest that ionospheric ions have undergone an energization which leads to a different velocity for different ion species. A mechanism leading to the same velocity, on the other hand, would require an alternating enhancement of the He+ and O+ fluxes in a source region to explain the anticorrelation of the densities.

Trans-dominant mutations in the 3'-terminal region of the rpoB gene define highly conserved, essential residues in the beta subunit of RNA polymerase: the GEME motif.

The multimeric DNA-dependent RNA polymerases are widespread throughout nature. The RNA polymerase of Escherichia coli, which is the most well characterized, consists of a holoenzyme with subunit stoichiometry of alpha2betabeta'sigma. The beta subunit is conserved and has been implicated in all stages of transcription. The extreme C-terminus of the beta subunit, which includes two well-conserved sequence segments, contributes to the active centre and has been proposed to act in transcriptional termination. We describe a genetic system for further characterizing the role of the extreme C-terminus of the beta subunit of E. coli RNA polymerase. This involves random, PCR (Polymerase Chain Reaction)-mediated mutagenesis of the 3' region of rpoB encoding the C-terminal 116 amino acids of beta, followed by the isolation and characterization of trans-dominant-negative mutations. Substitutions of conserved residues in this region were obtained that exhibited different degrees of growth inhibition in a host expressing the chromosomal-encoded wild-type form of the beta subunit. A number of different substitutions were isolated within the highly conserved sequence motif GEME (residues 1271-->1274 of the E. coli beta subunit). In addition, substitutions were obtained in the extreme C-terminal (surface-exposed) region of beta and at two residues previously proposed to be in the active site (H1237, K1242). The properties of the purified mutant holoenzymes, assessed by transcription assays in vitro, suggested a promoter blockading action. We have identified an important, highly conserved motif in the beta subunit, GEME (residues 1271-->1274). The nature and effect of the amino acid substitutions at the Gly residue in GEME emphasize the importance of a small, uncharged residue at this position. The in vitro properties of the most extreme trans dominant-negative mutants altered in the GEME motif (and the mutant characteristics in vivo) were similar to those of certain previously identified active-site mutants, suggesting that the altered RNA polymerases were capable of promoter binding and RNA chain initiation but were deficient in the subsequent transcriptional stage.

Na,K-ATPase mRNA beta 1 expression in rat myocardium--effect of thyroid status.

The abundance of Na,K-ATPase and its alpha and beta subunit mRNAs is upregulated in cardiac and other target tissue by thyroid hormone (T3). Multiple Na,K-ATPase mRNA beta 1 species encoding an identical beta 1 polypeptide are expressed in the heart. The different mRNA beta 1 species result from utilization of two transcription start-sites in the first exon and multiple (five) poly(A) signals in the terminal exon of the beta 1 gene. In the present study we identify the mRNA beta 1 species that are expressed in rat ventricular myocardium under basal conditions, and determine whether they are differentially regulated by T3. mRNA beta 1 species were identified by 3'-RACE followed by DNA sequencing, and by Northern blotting using probes derived from different regions of rat cDNA beta 1. Five mRNA beta 1 species are expressed in rat heart: mRNA beta 1 species that are initiated at the first transcription start-site and end at the first, second and fifth poly(A) sites (resulting in mRNAs of 1630, 1810, and 2780 nucleotides), and mRNA beta 1 species initiated at the second transcription start-site and ending at the second and fifth poly(A) sites (resulting in mRNAs of 1500 and 2490 nucleotides); in order of increasing length, the five mRNAs constitute 0.04, 0.15, 0.38, 0.11 and 0.32 of total mRNA beta 1 content. In hypothyroid rats (induced by addition of propyl-thiouracil to the drinking water for 3 weeks), total mRNA beta 1 content decreased to 0.18 euthyroid levels, which was associated with a disproportionate 7.5-fold decrease in the abundance of the longest transcript (P < 0.05); transcripts initiating at the first transcription start-site and ending at the second poly(A) signal in hypothyroid hearts were 0.26 euthyroid levels (P < 0.05). Hyperthyroidism induced by injection of normal rats with three doses of 100 micrograms T3/100 g body weight every 48 h resulted in an overall approximately 2-fold increase in mRNA beta 1 content with no change in the fractional contribution of any of the mRNA beta 1 species. The results indicate a complex heterogeneity in the expression of mRNA beta 1 in myocardium.

傾斜圧延法によるTi-6Al-4V合金継目無管の製造条件検討

Manufacturing conditions for Ti-6Al-4V alloy seamless pipes by inclined rolling process were investigated on laboratory scale. Elevated temperature torsion tests and piercing tests were carried out on Ti-6Al-4V alloy ingot and forged materials after various conditions. A portion of the pierced shell were hot rolled and annealed to predict microstructure and tensile properties of products by the inclined rolling process. The results were as follows.(1) Grain size affects deformability at elevated temperatures. Material with finer grain size possesses higher deformability as well as wider temperature range of high deformability in alpha+beta temperature region.(2) The material forged in beta region with coarse grain size possesses sufficient deformabilities for the piercing operation. There is no effect of the forging conditions on tensile properties after piercing operation.(3) The microstructure on the final products consists of fine acicular structure and their tensile properties satisfy the specification for Ti-6Al-4V seamless pipes.(4) Piercing temperature at 1373K and reheating temperature at 1223K are recommended for the inclined rolling process to avoid formation of grain boundary alpha phase which detoriorates ductility of the products.

Expression of elongation factor 1 beta' in Escherichia coli and its interaction with elongation factor 1 alpha from silk gland.

Silk gland elongation factor 1 (EF-1) consists of four subunits: alpha, beta, beta', and gamma. EF-1 beta beta' gamma catalyzes the exchange of GDP for GTP on EF-1 alpha and stimulates the binding of EF-1 alpha-dependent aminoacyl-tRNA to ribosomes. The carboxy-terminal regions of the EF-1 beta subunits from various species are highly conserved. We examined the region of EF-1 beta' that binds to EF-1 alpha by in vitro binding assays, and examined the GDP/GTP exchange activity using deletion mutants of a GST-EF1 beta' fusion protein. We thereby suggested a pivotal amino acid region, residues 189-222, of EF-1 beta' for binding to EF-1 alpha.

On large amplitude MHD waves in high‐beta plasma

Downstream of quasi‐parallel shocks, the magnetosheath is often observed as a region of high plasma beta, of the order of 10, with large magnetic field fluctuations and relatively weak thermal pressure fluctuations. Since the wave steepening results from the nonlinearity in the plasma thermal properties, these nonlinear magnetic fluctuations that are accompanied by linear pressure fluctuations in a high‐beta plasma do not necessarily lead to wave steepening. We develop a nonlinear theory based on MHD and observational evidence to describe such a system. We first perturb the MHD equations assuming the reciprocal of beta and the perturbed pressure to be small parameters and retaining nonlinear terms for the magnetic arid velocity perturbations. We then Fourier expand the perturbations and retain terms up to the first order. A nonpropagating mode is present that has the characteristics of a series of tangential discontinuities. A purely incompressible mode is present that propagates obliquely to the background field and is nondispersive and independent of the plasma beta. The field perturbations do not need to be coplanar with the background field and the wave vector. A nonlinear compressible mode is also found. In the limit of small field perturbations, the mode is similar to the linear slow mode in high‐beta plasmas. The first harmonic field perturbation is coplanar with the background field and the wavevector. When the mode propagates along the field, the density and field strength fluctuations are small at the primary frequency of the wave and are significant at a frequency twice the primary frequency. This frequency doubling phenomenon is most severe for parallel propagation. The compressibility of the mode makes it possible to couple the energy across the magnetopause into the magnetosphere. We show observational evidence for the existence of such modes.

Antigen-specific T-cell receptor V beta expression in Porphyromonas gingivalis-specific T-cell lines.

FACS analysis was used to determine the expression of 15 T-cell receptor V beta families on CD4 and CD8 cells in Porphyromonas gingivalis specific T-cell lines established from eight P. gingivalis-positive adult periodontitis and seven P. gingivalis-positive healthy or gingivitis subjects. All 15 T-cell receptor V beta families were expressed by the T-cell lines, although a significantly higher proportion of the CD4 cells expressed the 5.2-3 V beta region compared with the other 14 families, including the 5.3 region, suggesting that it is the 5.2 family which is overexpressed. This was also true for the CD8 cells, with the exception of the 3.1 region in adult periodontitis T-cell lines and the 3.1, 13.1/13.3 and 21.3 regions in healthy or gingivitis lines. Between the two clinical groups, a significantly lower percentage of 13.1/13.3-positive CD8 cells was noted in the adult periodontitis lines compared with the healthy or gingivitis lines. There was a significant reduction in DNA synthesis by the lines in the presence of P. gingivalis outer membrane antigens and fixed irradiated lymphoblastoid cell lines compared with cultures containing untreated irradiated lymphoblastoid cell lines and in cultures containing anti-class II major histocompatibility complex antibody in comparison with all other cultures. The results of this study have shown that P. gingivalis preferentially induces the T-cell receptor V beta 5.2 family on CD4 and CD8 cells in P. gingivalis-specific T-cell lines and that activation of T cells by P. gingivalis outer membrane antigens may be by antigen-specific rather than superantigen activity.