Literature about filling layer self-compacting concrete (FLSCC) has indicated that FLSCC plays a crucial role in its application to Chinese railway track system III (CRTS-III). It is apparent that the damage characteristics of FLSCC have not been clearly investigated, as the actual working conditions are not considered enough. There exists a remaining gap about the mechanical properties and fracture behaviors of FLSCC under bending loads. In order to fill this gap, in this study, three-point bending (TPB) tests on the FLSCC beams with precast notches were performed based on the real bending situation of FLSCC in CRTS-III. Acoustic emission (AE), strain gauges and a digital camera were utilized to monitor the fresh evolutionary laws of micro- and macro-cracks as well as the corresponding damage morphology. The study presents that the monitored load-crack mouth opening displacement (P-CMPD) curves, load-strain (P-ε) curves and AE activity curves all exhibited similar distributions, including four stages with increasing bending loads. In term of the AE activities, the first apparent crack in the interior and warning point of failure can be detected by analyzing the captured AE activities of the FLSCC beams. In addition, the dominant failure mode of the specimens was determined as tensile cracks according to the rising angle-average frequency (RA-AF) criterion for potential FLSCC application in terms of the limiting ratios. This failure mode indicates that under pure bending loads, the mid-span section is subjected to the maximum bending moment, and the specimen experiences tensile damage. Therefore, for future practical application, the structural health state of FLSCC in CRTS-III could be nondestructively real-time monitored by the AE technique. Meanwhile, the calculated fracture parameters of the FLSCC specimen can reflect the cracks stability of the specimen. This study can also present experimental and theoretical references for further studies on FLSCC in CRTS-Ⅲ under other types of loads.