Inorganic Nitrogen Availability Research Articles

Dry season irrigation promotes nutrient cycling by reorganizing Eucalyptus rhizosphere microbiome

In southern China, seasonal droughts and low soil phosphorus content constrain the productivity of Eucalyptus trees. To understand the rhizosphere microbiome response to the dry season, metagenomic sequencing analysis was used to investigate the 6-year-old Eucalyptus rhizosphere microbiome under four different irrigation and fertilization treatments. The results showed that irrigation and fertilization during the dry season significantly altered the composition of microbiome in the rhizosphere soil of Eucalyptus plantations. The soil physicochemical properties and enzyme activity explained 30.73 % and 29.75 % of the changes in bacterial and fungal community structure in Eucalyptus rhizosphere soil, respectively. Irrigation and fertilization during the dry season significantly altered the physicochemical properties of rhizosphere soil. Compared with the seasonal drought without fertilizer treatment (CK), the dry season irrigation with fertilizer treatment (WF) significantly increased the content of total nitrogen (46.34 %), available nitrogen (37.72 %), available phosphorus (440.9 %), and organic matter (35.34 %). Soil organic matter (OM), pH, and available phosphorus (AP) were key environmental factors influencing the microbial community composition. Moreover, irrigation and fertilization promoted carbon fixation and nitrogen and phosphorus mineralization, increasing soil OM content and the availability of inorganic nitrogen and phosphorus. Meanwhile, compared to the CK, the increase of acid phosphatase (16.81 %), invertase (146.89 %)and urease (59.45 %) in rhizosphere soil under irrigation (W) treatment further proves that dry season irrigation promote the soil carbon, nitrogen and phosphorus cycles. Irrigation and fertilization treatment alleviated the constraints of low phosphorus in southern China's soil, which promoted Eucalyptus productivity. In conclusion, we suggest implementing reasonable irrigation and fertilization strategies in the production practice of Eucalyptus and utilizing microbial resources to improve soil fertility and Eucalyptus productivity.

Distinct drivers of bacterial community assembly processes in riverine islands in the middle and lower reaches of the Yangtze River.

Riverine islands are widespread alluvium wetlands developed in large rivers, and bacterial communities are crucial to their ecological function, yet their assembly processes are rarely addressed. The ecosystem services provided by the middle and the lower Yangtze are primarily threatened by pollution discharge from agricultural land use, and resource overutilization (e.g., embankments), respectively. Here, we assessed bacterial community assembly processes and their drivers within riverine islands in the middle Yangtze River (MR islands) and those in the lower reach (LR islands). A significant distance-decay relationship was observed, although the turnover rate was lower than that of the terrestrial ecosystem with less connectivity. Deterministic and stochastic processes jointly shaped community patterns, and the influence of stochastic increased from 26% in MR islands to 59% for those in LR islands. Meanwhile, the bacterial community in MR islands was controlled more by inorganic nitrogen availability, whereas those in LR islands were governed by pH and EC, although those factors explained a limited fraction of variation in the bacterial community. Potential indicator taxa (affiliated with Nocardioides and Lysobacter) characterized the waterway transport pollution. Overall, our study demonstrated that bacterial community dissimilarity and the importance of dispersal limitation increased concurrently along the flow direction, while distinct local factors further determined bacterial community compositions by selecting habitat-specificity taxa and particularly metabolism function. These findings enhanced our understanding of the mechanisms driving changes in bacterial communities of riverine islands subject to increased anthropogenic impacts.IMPORTANCERivers are among the most threatened ecosystems globally and face multiple stressors related to human activity. However, linkages between microbial diversity patterns and assembly processes in rivers remain unclear, especially in riverine islands developed in large rivers. Our findings reveal that distinct factors result in divergent bacterial community compositions and functional profiles in the riverine islands in the middle Yangtze and those in the lower Yangtze, with substantial differentiation in deterministic and stochastic processes that jointly contribute to bacterial community assemblages. Additionally, keystone species may play important metabolic roles in coping with human-related disturbances. This study provides an improved understanding of relationships between microbial diversity patterns and ecosystem functions under environmental changes in large river ecosystems.

The endemic kelp Lessonia corrugata is being pushed above its thermal limits in an ocean warming hotspot.

Kelps are in global decline due to climate change, which includes ocean warming. To identify vulnerable species, we need to identify their tolerances to increasing temperatures and determine whether tolerances are altered by co-occurring drivers such as inorganic nutrient levels. This is particularly important for those species with restricted distributions, which may already be experiencing thermal stress. To identify thermal tolerance of the range-restricted kelp Lessonia corrugata, we conducted a laboratory experiment on juvenile sporophytes to measure performance (growth, photosynthesis) across its thermal range (4-22°C). We determined the upper thermal limit for growth and photosynthesis to be ~22-23°C, with a thermal optimum of ~16°C. To determine if elevated inorganic nitrogen availability could enhance thermal tolerance, we compared the performance of juveniles under low (4.5 μmol · d-1) and high (90 μmol · d-1) nitrate conditions at and above the thermal optimum (16-23.5°C). Nitrate enrichment did not enhance thermal performance at temperatures above the optimum but did lead to elevated growth rates at the thermal optimum. Our results indicate L. corrugata is likely to be extremely susceptible to moderate ocean warming and marine heatwaves. Peak sea surface temperatures during summer in eastern and northeastern Tasmania can reach up to 20-21°C, and climate projections suggest that L. corrugata's thermal limit will be regularly exceeded by 2050 as southeastern Australia is a global ocean-warming hotspot. By identifying the upper thermal limit of L. corrugata, we have taken a critical step in predicting the future of the species in a warming climate.

Assessing inorganic nitrogen transport in marine phytoplankton assemblages through the 15N-tracer technique and metatranscriptomics

The availability of inorganic nitrogen is considered one of the limiting factors for primary production in the ocean. However, different phytoplankton possess unique strategies to take up and assimilate nitrate and ammonium to cope with environmental changes. To investigate the nitrogen uptake characteristics of different size-fractionated phytoplankton in natural assemblages, 3 research cruises were conducted in the southern East China Sea in 2018 and 2019. The nitrogen uptake characteristics of 2 size-fractionated natural assemblages, microphytoplankton (20-200 µm) and pico-nanophytoplankton (<20 µm), were measured using the 15N-tracer technique. At most of the stations, significantly higher potential maximum uptake rates of ammonium than of nitrate were detected in the pico-nanophytoplankton, indicating that small phytoplankton possess a relatively superior capacity to take up ammonium. By contrast, comparing the potential maximum uptake rate for nitrate between microphytoplankton and pico-nanophytoplankton showed that microphytoplankton exhibit a higher capacity for nitrate uptake as a nitrogen source compared to pico-nanophytoplankton. However, repressed uptake rates of ammonium and nitrate in microphytoplankton were sometimes found at the coastal station even when ambient nitrate concentrations remained high. Metatranscriptomic analysis of nitrogen transporter genes in microphytoplankton suggests that most diatoms utilize regenerated ammonium before nitrate to maintain their populations at the end of blooms. Metatranscriptomic approaches identify the transcriptional responses of dominant diatoms to explain how diatoms regulate their nitrogen transporter genes to cope with environmental changes in natural assemblages.

Gross nitrogen transformation rates in shifting cultivation systems in northern Thailand: Controlling factors and implications for inorganic nitrogen availability

Slash-and-burn practices and subsequent fallow periods affect soil nitrogen (N) availability. Although extensive studies have examined the global temporal patterns of inorganic N after fire, NO3− regulation remains unclear due to ecosystem-dependent responses. Despite inorganic N pool control by NH4+ and NO3− production and consumption, local-scale patterns and mechanisms of gross N transformations, particularly in tropical regions, remain insufficiently understood. Thus, we aimed to elucidate the controlling factors of inorganic N in the shifting cultivation cycle in Northern Thailand, using a 15N pool dilution method on soil samples at 0–10 cm depth collected across various post-burning stages (1, 4, 6, and 7 years after burning) and forest. We found that gross ammonification was enhanced by high soil organic matter and microbial biomass, while gross nitrification was enhanced by greater soil alkalinity. Ammonium immobilization increased with higher microbial biomass, while NO3− immobilization increased with lower NH4+ availability. With increasing fallow period, microbial biomass and consequently gross ammonification increased, boosting the NH4+ pool. Soil acidity, correlated with soil texture, influenced nitrification: coarser-textured soil intensified acidity and decreased gross nitrification, resulting in NH4+-dominance, while finer-textured soil alleviated acidity, promoting nitrification over NH4+ immobilization, leading to NO3−-dominance. Our findings confirm that the fallow stage, along with which microbial biomass increases, was an essential driving factor regulating ammonification, while soil acidity, unrelated to fallow but a function of sand/silt content, was an essential driving factor regulating nitrification under shifting cultivation in Northern Thailand.

Strong seasonal patterns of DOC release by a temperate seaweed community: Implications for the coastal ocean carbon cycle.

Release of dissolved organic carbon (DOC) by seaweed underpins the microbial food web and is crucial for the coastal ocean carbon cycle. However, we know relatively little of seasonal DOC release patterns in temperate regions of the southern hemisphere. Strong seasonal changes in inorganic nitrogen availability, irradiance, and temperature regulate the growth of seaweeds on temperate reefs and influence DOC release. We seasonally surveyed and sampled seaweed at Coal Point, Tasmania, over 1 year. Dominant species with or without carbon dioxide (CO2 ) concentrating mechanisms (CCMs) were collected for laboratory experiments to determine seasonal rates of DOC release. During spring and summer, substantial DOC release (10.06-33.54 μmol C · g DW-1 · h-1 ) was observed for all species, between 3 and 27 times greater than during autumn and winter. Our results suggest that inorganic carbon (Ci ) uptake strategy does not regulate DOC release. Seasonal patterns of DOC release were likely a result of photosynthetic overflow during periods of high gross photosynthesis indicated by variations in tissue C:N ratios. For each season, we calculated a reef-scale net DOC release for seaweed at Coal Point of 7.84-12.9 g C · m-2 · d-1 in spring and summer, which was ~16 times greater than in autumn and winter (0.2-1.0 g C · m-2 · d-1 ). Phyllospora comosa, which dominated the biomass, contributed the most DOC to the coastal ocean, up to ~14 times more than Ecklonia radiata and the understory assemblage combined. Reef-scale DOC release was driven by seasonal changes in seaweed physiology rather than seaweed biomass.

Warming, permafrost thaw and increased nitrogen availability as drivers for plant composition and growth across the Tibetan Plateau

Permafrost-affected ecosystems are subject to warming and thawing, which can increase the availability of subsurface nitrogen (N) with consequences in otherwise N-limited tundra and alpine vegetation. Here, we quantify the extent of warming and permafrost thawing and the corresponding effects on nitrogen availability and plant growth based on a 20-year survey across 14 sites on the Tibetan Plateau. The survey showed that most sites have been subject to warming and thawing and that the upper permafrost zone across all sites was rich in inorganic N, mainly as ammonium. We further explore the efficiency of plants to utilize 15N-labelled inorganic N over five years following 15N addition at the permafrost table far below the main root zone. The 15N experiment showed that deep-rooted plant species were able to utilize the labelled N. A SEM model suggests that changes in vegetation can be explained by both active layer warming and permafrost thawing and the associated changes in inorganic nitrogen availability. Our results highlight a feedback mechanism of climate warming, in which released plant-available N may favour deep-rooted plants. This can explain important changes in plant composition and growth across the sites on the Tibetan Plateau.

The influence of ammonium to nitrate ratio on the thermal responses of early life stages of the giant kelp Macrocystis pyrifera

The distribution and productivity of seaweeds, including kelps, are strongly influenced by changes in temperature and inorganic nitrogen (Ni) availability. However, their tolerances, sensitivities, and capacity to adjust to these changes can vary across their complex life cycle (microscopic and macroscopic stages). For the early life stages of Macrocystis, this study investigated the effect of the nitrate: ammonium ratio on physiological traits and gametophyte development at a range of temperatures (6.5 to 26.5 °C). Thermal performance curves (TPCs) were utilized to determine and predict the effect of temperature on meiospore germination success (%), gametophyte size (μm2), sex ratio and physiological traits (photosynthetic efficiency and nitrate and ammonium uptake rates). We found that the presence of NH4+ led to negative NO3− uptake rates in Macrocystis pyrifera gametophytes and reduced growth rates, and results suggest that thermal tolerance windows might vary between developmental stages and physiological traits. Our findings indicate that reduced meiospore germination and gametophyte size induced by suboptimal temperatures and increased NH4+concentrations can lead to lower physiological performance that might subsequently affect adult individuals and populations. Knowledge of the Ni uptake kinetics and source preferences across different life cycle phases can be crucial for conservation and aquaculture purposes as it might increase species productivity and persistence in a changing ocean.

Ecological consequences of a single introduced species to the Antarctic: terrestrial impacts of the invasive midge Eretmoptera murphyi on Signy Island

The nutrient-poor soils of Antarctica are sensitive to change. Recent increases in the number of anthropogenic introductions mean that understanding the impact of non-native species on Antarctic soils is pertinent, and essential for developing future risk assessments and management strategies. Through comparative baseline assessments of vegetation, microbes, soil chemistry, substrate composition and micro-arthropod abundance, this study explored if there are detectable terrestrial ecosystem impacts resulting from the introduction of the chironomid midge Eretmoptera murphyi to Signy Island in maritime Antarctica. The key finding was that E. murphyi is the likely driver of an increase in inorganic nitrogen availability within the nutrient-poor soils in which it occurs. When compared with the levels of inorganic nitrogen present in soils influenced by native vertebrate wildlife aggregations, the increase in local nitrate availability associated with E. murphyi was similar to that caused by deposits from seals and giant petrel colonies. Overall, available nitrate has increased by three- to five-fold in soils colonised by the midge, relative to undisturbed soils. This may ultimately impact rates of decomposition as well as the native plant and micro-arthropod communities of Signy Island.

Nutrients and chlorophyll-a in the Gulf of Oman: High seasonal variability in nitrate distribution

As part of comprehensive oceanographic studies on the Persian Gulf and Gulf of Oman, this article documented the seasonal and vertical distribution of nutrients, chlorophyll-a, and nitrogen deficiency in the Strait of Hormuz and northern part of Gulf of Oman. During the three consecutive research cruises of RV Kavoshgar Khalij Fars (Persian Gulf Explorer) in September–October 2018, December 2018, and May 2019, 7–18 stations were surveyed. During the southwest monsoon season, the water column is characterized by a 10–20 m shallow mixed layer and high spatial variation in nutrients and their ratio in the upper 100 m. Shallow remineralization of nitrogen-rich organic matter and lateral advection from the Arabian Sea upwelling system lead to nutrient accumulation, and enrichment of nitrate-nitrogen compared to P and Si in the euphotic zone with some sign of Si limitation. On the other hand, deepening of the mixed layer due to the cool convective mixing during the northeast monsoon, brings nutrients to the surface and stimulate the phytoplankton blooms (i.e. with surface chlorophyll-a maximum of 1.46 ± 0.57 μg l−1). So, the primary production is likely to be controlled by grazing rather than nutrient availability during the northeast monsoon. In the spring inter-monsoon, the multilayer structure of the water column with a less well-characterized mixed layer has a surface layer severely depleted in nitrite and nitrate with low yet detectable concentrations of silicate (0.77 ± 0.44 μM) and phosphate (0.29 ± 0.09 μM). The distribution of surface chlorophyll-a concentration was patchy with generally low concentrations of 0.37 ± 0.10 μg l−1 with highly variable subsurface maxima occurring at 10–25 m depth level. Primary production seemed to be potentially limited by inorganic nitrogen availability in spring inter-monsoon, as severe nitrogen deficiencies extended from the surface to the bottom layer (17.54 ± 4.39 μM at 400–1000 m depth level).

Rice straw biochar alters inorganic nitrogen availability in paddy soil mainly through abiotic processes

Rice straw biochar alters inorganic nitrogen availability in paddy soil mainly through abiotic processes

Diverse Genomic Traits Differentiate Sinking-Particle-Associated versus Free-Living Microbes throughout the Oligotrophic Open Ocean Water Column.

ABSTRACTBacteria and archaea are central to the production, consumption, and remineralization of dissolved and particulate organic matter and contribute critically to carbon delivery, nutrient availability, and energy transformations in the deep ocean. To explore environmentally relevant genomic traits of sinking-particle-associated versus free-living microbes, we compared habitat-specific metagenome-assembled genomes recovered throughout the water column in the North Pacific Subtropical Gyre. The genomic traits of sinking-particle-associated versus free-living prokaryotes were compositionally, functionally, and phylogenetically distinct. Substrate-specific transporters and extracellular peptidases and carbohydrate-active enzymes were more enriched and diverse in particle-associated microbes at all depths than in free-living counterparts. These data indicate specific roles for particle-attached microbes in particle substrate hydrolysis, uptake, and remineralization. Shallow-water particle-associated microbes had elevated genomic GC content and proteome nitrogen content and reduced proteome carbon content in comparison to abyssal particle-associated microbes. An inverse trend was observed for their sympatric free-living counterparts. These different properties of attached microbes are postulated to arise in part due to elevated organic and inorganic nitrogen availability inside sinking particles. Particle-attached microbes also were enriched in genes for environmental sensing via two-component regulatory systems, and cell-cell interactions via extracellular secretion systems, reflecting their surface-adapted lifestyles. Finally, particle-attached bacteria had greater predicted maximal growth efficiencies than free-living bacterioplankton at all depths. All of these particle-associated specific genomic and proteomic features appear to be driven by microhabitat-specific elevated nutrient and energy availability as well as surface-associated competitive and synergistic ecological interactions. Although some of these characteristics have been previously postulated or observed individually, we report them together here in aggregate via direct comparisons of cooccurring free-living and sinking-particle-attached microbial genomes from the open ocean.

Divergent Response of the Supply Capacity and Turnover of Inorganic Nitrogen to Pitaya Cultivation in the Subtropical Karst Region of Southwest China

Determining the availability and supply capacity of soil inorganic nitrogen (N) can effectively guide the appropriate application of N fertilizers during crop cultivation. However, the mechanism underlying soil inorganic N production remains unknown for cash crops in karst regions. In this study, the rates of organic N mineralization to ammonium (NH4+) and NH4+ nitrification to nitrate (NO3−) were determined using a 15N tracing technique to evaluate the supply capacity of inorganic N in soils from woodland and pitaya plantations with different cultivation years (3, 9, and 15 years) in the subtropical karst region of China. The conversion of woodland to pitaya plantations significantly decreased the content of soil organic carbon (SOC), total N, calcium (Ca), and magnesium (Mg), along with the soil pH and cation-exchange capacity (CEC), but significantly increased the content of available potassium, available phosphorus, iron, and aluminum, in a more pronounced fashion with the increasing length of pitaya cultivation. The conversion of woodland to pitaya plantations has not significantly changed soil NH4+ and NO3− content, but this land use has resulted in divergent effects on mineralization and nitrification rates. Compared to woodland (5.49 mg N kg−1 d−1), pitaya cultivation significantly reduced the mineralization rate to 0.62–2.38 mg N kg−1 d−1. Conversely, the nitrification rate significantly increased from 4.71 mg N kg−1 d−1 in soil under woodland to 9.32 mg N kg−1 d−1 in soil under 3-year pitaya cultivation, but this rate decreased to 1.74 mg N kg−1 d−1 under 15-year cultivation. Furthermore, the mean residence time of inorganic N was significantly higher in long-term than in short-term pitaya plantations, indicating the decline in inorganic N turnover with the increasing length of pitaya cultivation. Taken together, long-term pitaya cultivation could significantly decrease the supply capacity and turnover of inorganic N in soil. The Ca, Mg, SOC, and total N content, as well as CEC, were significantly and positively related to the mineralization rate, but negatively related to the mean residence time of NH4+ and NO3−, suggesting that the incorporation of organic matter can accelerate the soil inorganic N supply and turnover for long-term pitaya plantation in subtropical regions.

Hardwood mixtures facilitate leaf litter decomposition and soil nitrogen mineralization in conifer plantations

Productivity in conifer plantations can be increased by hardwood mixture. However, the underlying mechanisms that govern the relationship between hardwood mixture and productivity remain poorly understood, particularly with respect to nutrient cycling. We investigated how and to what extent hardwood mixtures alter nitrogen amounts in leaf litterfall, leaf litter decomposition rates, and soil nitrogen mineralization rates in an experiment that used different thinning intensities (i.e., a non-thinned “control” group with few hardwoods, a 33%-thinned “weak” group with a small amount of hardwoods, and a 67%-thinned “intensive” group with abundant hardwoods) in a conifer Cryptomeria japonica plantation (38-year old). Most of the hardwoods were 15-year old trees that have been regenerated after the first thinning. The annual leaf litterfall amount for the conifer was highest in the control group and lowest in the intensive group, whereas the reverse was true for hardwoods, although the hardwoods’ annual leaf litterfall amount was approximately half that of conifers, even in the intensive group. Consequently, the annual amount of leaf litterfall of hardwoods and conifers combined was lowest in the intensive group. However, the total amount of nitrogen in the annual leaf litterfall of hardwoods and conifers combined did not differ according to thinning intensity, because the mass-based nitrogen concentration in the leaf litterfall of hardwoods was twice that of conifers. The leaf litter decomposition rate in hardwoods was approximately three times faster than that in conifers irrespective of thinning intensity, mainly due to the lower carbon-to-nitrogen (C:N) ratio. Thus, the total amount of nitrogen in the decomposed leaves of hardwoods and conifers combined, calculated by multiplying the total amount of nitrogen in the annual leaf litterfall of hardwoods and conifers by the decomposition rate and summing the results, was highest in the intensive group. In soil from shallow depths (0–10 cm), the nitrogen mineralization rate increased in the order of control, weak, and intensive, attributable primarily to the C:N ratio, which decreased in the same order. The results indicated that increasing the hardwood content by intensive thinning significantly enhances the availability of soil inorganic nitrogen in conifer plantations, by facilitating leaf litter decomposition and soil nitrogen mineralization. These findings indicate that hardwood mixtures can increase forest productivity by enhancing nitrogen cycling.

Seasonal nitrogen fluxes of the Lena River Delta

The Arctic is nutrient limited, particularly by nitrogen, and is impacted by anthropogenic global warming which occurs approximately twice as fast compared to the global average. Arctic warming intensifies thawing of permafrost-affected soils releasing their large organic nitrogen reservoir. This organic nitrogen reaches hydrological systems, is remineralized to reactive inorganic nitrogen, and is transported to the Arctic Ocean via large rivers. We estimate the load of nitrogen supplied from terrestrial sources into the Arctic Ocean by sampling in the Lena River and its Delta. We took water samples along one of the major deltaic channels in winter and summer in 2019 and sampling station in the central delta over a one-year cycle. Additionally, we investigate the potential release of reactive nitrogen, including nitrous oxide from soils in the Delta. We found that the Lena transported nitrogen as dissolved organic nitrogen to the coastal Arctic Ocean and that eroded soils are sources of reactive inorganic nitrogen such as ammonium and nitrate. The Lena and the Deltaic region apparently are considerable sources of nitrogen to nearshore coastal zone. The potential higher availability of inorganic nitrogen might be a source to enhance nitrous oxide emissions from terrestrial and aquatic sources to the atmosphere.

Growth responses of ectomycorrhizal and arbuscular mycorrhizal seedlings to low soil nitrogen availability in a tropical montane forest

Abstract Differences in nutrient acquisition pathways between arbuscular mycorrhizal (AM) and ectomycorrhizal (EM) fungi are associated with greater soil organic matter accumulation and reduced inorganic nitrogen (N) availability in EM‐dominated forests. These plant–soil feedbacks are expected to influence seedling recruitment and the maintenance of diversity. Montane forests of Central America are characterized by a mosaic of AM and EM dominance. We used a seedling transplant and soil manipulation experiment on Volcán Barú, Panama, to evaluate whether patches of oak (EM‐dominated) forest and mixed (AM‐dominated) forest affect seedling growth. We predicted that (a) plant–soil feedbacks would result in lower soil inorganic N availability in oak than in mixed forests, (b) consequently AM seedlings would grow more slowly and have lower foliar N concentrations in oak forest and (c) dependence of EM seedlings on organic N uptake via mycorrhiza would mean that inorganic N addition would increase seedling performance for AM but not EM (i.e. oak) seedlings. As soil organic matter accumulation may affect seedling performance beyond altering nutrient supply, we also tested whether organic matter removal differentially affected AM and EM seedlings. Nitrogen availability was six times lower and the soil organic layer three times deeper in oak‐dominated stands compared to mixed stands. Foliar N was lower for AM seedlings growing in oak than in mixed forest, but did not differ for oak seedlings and was increased only marginally by N addition for both AM and EM seedlings growing in both AM and EM forests. Seedling growth did not respond to N addition or organic matter removal. However, AM seedlings generally grew slower in oak forest compared with AM forest, consistent with lower foliar N concentration and low‐light availability. These results suggest that changes in soil nitrogen availability have a limited effect on seedling growth. In the neotropics, EM tree communities occur at high elevation. Future upslope migration of trees may result in AM‐dominated tree communities encountering unfavourable soil conditions generated by EM‐dominated canopies. While longer term experiments are needed, our results suggest that AM seedlings may not be able to tolerate conditions associated with EM forest. A free Plain Language Summary can be found within the Supporting Information of this article.

Ectomycorrhizal fungal decay traits along a soil nitrogen gradient

The extent to which ectomycorrhizal (ECM) fungi decay soil organic matter (SOM) has implications for accurately predicting forest ecosystem response to climate change. Investigating the distribution of gene traits associated with SOM decay among ectomycorrhizal fungal communities could improve understanding of SOM dynamics and plant nutrition. We hypothesized that soil inorganic nitrogen (N) availability structures the distribution of ECM fungal genes associated with SOM decay and, specifically, that ECM fungal communities occurring in inorganic N-poor soils have greater SOM decay potential. To test this hypothesis, we paired amplicon and shotgun metagenomic sequencing of 60 ECM fungal communities associating with Quercus rubra along a natural soil inorganic N gradient. Ectomycorrhizal fungal communities occurring in low inorganic N soils were enriched in gene families involved in the decay of lignin, cellulose, and chitin. Ectomycorrhizal fungal community composition was the strongest driver of shifts in metagenomic estimates of fungal decay potential. Our study simultaneously illuminates the identity of key ECM fungal taxa and gene families potentially involved in the decay of SOM, and we link rhizomorphic and medium-distance hyphal morphologies with enhanced SOM decay potential. Coupled shifts in ECM fungal community composition and community-level decay gene frequencies are consistent with outcomes of trait-mediated community assembly processes.

Internal nitrogen dynamics in stormwater pond sediments are influenced by pond age and inorganic nitrogen availability

Internal nitrogen dynamics in stormwater pond sediments are influenced by pond age and inorganic nitrogen availability

Interactive effects of light and nutrients on stream algal growth modified by forest management in boreal landscapes

Boreal forests account for 30% of the world’s total forest cover and in many places are subject to intensive forest management, which often involves complete removal of overstory vegetation by clear-cutting. However, we still do not fully understand how forest management affects aquatic ecosystems in these landscapes. Here we asked how forest management-induced changes in environmental conditions, such as incident light and nutrient availability, affect benthic algal growth and nutrient limitation in boreal headwater streams of northern Sweden. We answered this question using a combination of correlative and experimental approaches across a range of forested streams spanning a gradient of site (e.g. canopy openness and water chemistry) and catchment-level (e.g. age of forest regrowth) parameters, with variation among the study streams influenced by different forest management histories and underlying natural variation. We found that benthic algal growth in these forested streams was largely driven by local interactions between dissolved inorganic nitrogen (N) availability and incident light reaching benthic surfaces. Greater water temperature and shallower depths were also associated with greater algal growth. Although high dissolved organic carbon (DOC) concentrations often play a role in reducing light availability to autotrophs in boreal aquatic systems, it was not an important predictor of algal growth in small forested streams despite a large DOC concentration gradient (5 – 32 mg/L). Results from experimental nutrient additions supported the role of N as a key limiting nutrient, but also revealed both spatial and seasonal factors that modulate the effects of altered nutrient availability. Overall, our results suggest that differences in how light regimes and nutrient loading respond to forest management generate small-scale variation in the controls over stream primary productivity, which likely shift in relative importance at the time scale of a forest rotation (60 to 100 years).

Nonlinear carbon cycling responses to precipitation variability in a semiarid grassland

Changes in precipitation amount and variability would profoundly affect carbon (C) cycling in arid and semiarid grasslands. However, compared to the effects of precipitation amounts, little is understood about the impacts of precipitation temporal variability on terrestrial C cycling. To explore relationships between precipitation variability and C cycling processes and the underlying mechanisms, we conducted a 3-year field experiment and a 12-year model simulation, in which the constant seasonal precipitation amount was temporally manipulated with four and six levels of precipitation variability, respectively, in a semiarid grassland. Based on the manipulative experiment, we found various nonlinear relationships between C cycling processes and the coefficient of precipitation variability (Pcv), including a trinomial relationship for soil respiration (tipping point: 3 and 4.3), convex relationships for gross and net ecosystem production (peak at 3.5) as well as belowground biomass (peak at 4) and a nonlinear negative relationship for ecosystem respiration (peak at 2.5). Such relationships were regulated by seasonal averaged soil water content (SWC), early-growing season precipitation amount, soil inorganic nitrogen availability (SIN), and both SWC and SIN, respectively. However, these results from the manipulative experiment did not match those from the model simulation, in which ecosystem C cycling processes, dominated only by SWC responses, showed positive linear responses to Pcv. Our results mirror that the nonlinear responses of grassland C cycling to precipitation variability as regulate by SWC and SIN should be incorporated into models to forecast future ecosystem shifts under climate change.