Australian Mammals Research Articles

Movement and ranging behaviour of long-nosed potoroos (Potorous tridactylus) in south-west Victoria, Australia

Context A comprehensive understanding of movements and space use can underpin the effective management of threatened species. GPS dataloggers can collect large amounts of high-quality movement data, and recent advances in statistical approaches allow for robust estimates of home range size to be generated. Until recently, technological and practical constraints have generally restricted the collection of movement data via GPS dataloggers to larger species. However, reductions in the size and weight of GPS dataloggers now allow for this technology to be applied to smaller species. Aims The aim of this study was to describe the home range and movement patterns of a nationally vulnerable, native Australian ground-dwelling mammal, the long-nosed potoroo (Potorous tridactylus), in south-west Victoria, mainland Australia. Methods We attached GPS dataloggers to 40 long-nosed potoroos between 2020 and 2022 and estimated home range size using dynamic Brownian Bridge movement models. We evaluated the influence of physiological factors such as body mass and sex on home range size and described patterns of home range overlap between and within sexes. Key results Mean home range sizes were estimated to be 13.73 ha (95% CI: 10.9–16.6) and 6.67 ha (95% CI: 5.49–7.85) for males and females respectively. Home range size scaled with body mass in males but not females, and ranges were largely overlapping – although there was some evidence of intrasexual spatial partitioning of core range areas in females. Conclusions Ours is the first application of GPS dataloggers to this species, and our home range estimates are over twice as large as other reported estimates for mainland Australia. Long-nosed potoroos may range across larger areas than previously predicted on mainland Australia. Implications This knowledge may be used to optimise the management of long-nosed potoroo populations before and after fire – a key threatening process for this species. Our study highlights the value of integrating GPS dataloggers and robust home range estimators when describing the movement ecology of a population.

Australian terrestrial mammals: how many modern extinctions?

This note updates the list of extinct Australian terrestrial mammal species and subspecies and, from published scientific literature, reports 40 species and six subspecies that are presumed to have become extinct since European settlement of Australia.

Using eDNA metabarcoding to understand the effect of fire on the diet of small mammals in a woodland ecosystem.

Food acquisition is a fundamental process that drives animal distribution and abundance, influencing how species respond to changing environments. Disturbances such as fire create significant shifts in available dietary resources, yet, for many species, we lack basic information about what they eat, let alone how they respond to a changing resource base. In order to create effective management strategies, faunal conservation in flammable landscapes requires a greater understanding of what animals eat and how this change following a fire. What animals eat in postfire environments has received little attention due to the time-consuming methodologies and low-resolution identification of food taxa. Recently, molecular techniques have been developed to identify food DNA in scats, making it possible to identify animal diets with enhanced resolution. The primary aim of this study was to utilize eDNA metabarcoding to obtain an improved understanding of the diet of three native Australian small mammal species: yellow-footed antechinus (Antechinus flavipes), heath mouse (Pseudomys shortridgei), and bush rat (Rattus fuscipes). Specifically, we sought to understand the difference in the overall diet of the three species and how diet changed over time after fire. Yellow-footed antechinus diets mostly consisted of moths, and plants belonging to myrtles and legume families while bush rats consumed legumes, myrtles, rushes, and beetles. Heath mouse diet was dominated by rushes. All three species shifted their diets over time after fire, with most pronounced shifts in the bush rats and least for heath mice. Identifying critical food resources for native animals will allow conservation managers to consider the effect of fire management actions on these resources and help conserve the species that use them.

Affordable RFID loggers for monitoring animal movement, activity, and behaviour.

Effective conservation management strategies require accurate information on the movement patterns and behaviour of wild animals. To collect these data, researchers are increasingly turning to remote sensing technology such as radio-frequency identification (RFID). RFID technology is a powerful tool that has been widely implemented in ecological research to identify and monitor unique individuals, but it bears a substantial price tag, restricting this technology to generously-funded disciplines and projects. To overcome this price hurdle, we provide detailed step-by-step instructions to source the components for, and construct portable RFID loggers in house, at a fraction of the cost (~5%) of commercial RFID units. Here, we assess the performance of these RFID loggers in the field and describe their application in two studies of Australian mammal species; monitoring nest-box use in the Northern quolls (Dasyurus hallucatus) and observing the foraging habits of quenda (Isoodon fusciventer) at feeding stations. The RFID loggers performed well, identifying quenda in >80% of visits, and facilitating the collection of individual-level behavioural data including common metrics such as emergence time, latency to approach, and foraging effort. While the technology itself is not novel, by lowering the cost per unit, our loggers enabled greater sample sizes, increasing statistical power from 0.09 to 0.75 in the quoll study. Further, we outline and provide solutions to the limitations of this design. Our RFID loggers proved an innovative method for collecting accurate behavioural and movement data. With their ability to successfully identify individuals, the RFID loggers described here can act as an alternative or complementary tool to camera traps. These RFID loggers can also be applied in a wide variety of projects which range from monitoring animal welfare or demographic traits to studies of anti-predator responses and animal personality, making them a valuable addition to the modern ecologists' toolkit.

A molecular characterization of marsupial filarioid nematodes of the genus Breinlia.

Here we present the genetic relationships of 26 specimens of the genus Breinlia (Nematoda: Filarioidea) from a range of Australian marsupials using markers in the small subunit of nuclear ribosomal RNA and mitochondrial cytochrome c oxidase subunit 1 (cox1) genes and compare them with morphological determinations. The molecular data support the validity of most of the morpho-species included in the study and provide provisional insights into the phylogeny of the genus in Australian mammals, with dasyuroid marsupials appearing to be the original hosts. The recent discovery of Breinlia annulipapillata in the eye of a human brings this genus of parasites into the group of emerging infectious parasitic diseases.

Distinctive diets of eutherian predators in Australia.

Introduction of the domestic cat and red fox has devastated Australian native fauna. We synthesized Australian diet analyses to identify traits of prey species in cat, fox and dingo diets, which prey were more frequent or distinctive to the diet of each predator, and quantified dietary overlap. Nearly half (45%) of all Australian terrestrial mammal, bird and reptile species occurred in the diets of one or more predators. Cat and dingo diets overlapped least (0.64 ± 0.27, n = 24 location/time points) and cat diet changed little over 55 years of study. Cats were more likely to have eaten birds, reptiles and small mammals than foxes or dingoes. Dingo diet remained constant over 53 years and constituted the largest mammal, bird and reptile prey species, including more macropods/potoroids, wombats, monotremes and bandicoots/bilbies than cats or foxes. Fox diet had greater overlap with both cats (0.79 ± 0.20, n = 37) and dingoes (0.73 ± 0.21, n = 42), fewer distinctive items (plant material, possums/gliders) and significant spatial and temporal heterogeneity over 69 years, suggesting the opportunity for prey switching (especially of mammal prey) to mitigate competition. Our study reinforced concerns about mesopredator impacts upon scarce/threatened species and the need to control foxes and cats for fauna conservation. However, extensive dietary overlap and opportunism, as well as low incidence of mesopredators in dingo diets, precluded resolution of the debate about possible dingo suppression of foxes and cats.

Molecular detection of two new putative species of gammaherpesvirus in petaurid possums.

A molecular survey of herpesviruses in Australian native mammals was conducted, spanning 260 individuals from 27 species. Among the herpesviruses detected, a putative new gammaherpesvirus species was detected in the yellow-bellied glider (Petaurus australis), and another in the critically endangered Leadbeater's possum (Gymnobelideus leadbeateri). In addition, the known host range of the putative species macropodid gammaherpesvirus 3 (MaHV-3) is herein extended to the western grey kangaroo (Macropus fuliginosus). These findings expand our understanding of herpesviruses in Australian mammals and may inform biosecurity protocols for captive and translocated populations.

Observations of interference competition between the introduced black rat and native marsupial gliders in Australia

AbstractIntroduced rodents, particularly the black rat (Rattus rattus), have caused serious ecological impacts due to their ability to interact with native species as both predators, and by eliciting competitive pressure. However, impacts of black rats upon many Australian mammals have yet to be determined, particularly when those mammals are arboreal. Here, we present novel observations in the form of camera trap footage and photographs of interspecific competition between the introduced black rat and two species of arboreal gliding marsupial (sugar gliders (Petaurus breviceps) and squirrel gliders (Petaurus norfolcensis)) in urban bushland reserves in New South Wales, Australia. Gliders were found to flee or were prevented from exploiting food resources due to antagonistic posturing and physical attacks by black rats. While interspecific aggression and interference competition between black rats and native mammal species has been demonstrated previously, this appears to be the first observation of such interactions for Australian gliders. Our findings may have implications for the future management of glider populations in urban bushland where they co‐occur with rats; however, further research needs to be undertaken to determine the extent of this potential threat.

Laying low: Rugged lowland rainforest preferred by feral cats in the Australian Wet Tropics.

Invasive mesopredators are responsible for the decline of many species of native mammals worldwide. Feral cats have been causally linked to multiple extinctions of Australian mammals since European colonization. While feral cats are found throughout Australia, most research has been undertaken in arid habitats, thus there is a limited understanding of feral cat distribution, abundance, and ecology in Australian tropical rainforests. We carried out camera‐trapping surveys at 108 locations across seven study sites, spanning 200 km in the Australian Wet Tropics. Single‐species occupancy analysis was implemented to investigate how environmental factors influence feral cat distribution. Feral cats were detected at a rate of 5.09 photographs/100 days, 11 times higher than previously recorded in the Australian Wet Tropics. The main environmental factors influencing feral cat occupancy were a positive association with terrain ruggedness, a negative association with elevation, and a higher affinity for rainforest than eucalypt forest. These findings were consistent with other studies on feral cat ecology but differed from similar surveys in Australia. Increasingly harsh and consistently wet weather conditions at higher elevations, and improved shelter in topographically complex habitats may drive cat preference for lowland rainforest. Feral cats were positively associated with roads, supporting the theory that roads facilitate access and colonization of feral cats within more remote parts of the rainforest. Higher elevation rainforests with no roads could act as refugia for native prey species within the critical weight range. Regular monitoring of existing roads should be implemented to monitor feral cats, and new linear infrastructure should be limited to prevent encroachment into these areas. This is pertinent as climate change modeling suggests that habitats at higher elevations will become similar to lower elevations, potentially making the environment more suitable for feral cat populations.

Australia's most imperilled vertebrates

The likelihood of extinction within the next 20 years was determined for 47 Australian mammal, bird, reptile, frog and freshwater fish taxa previously identified as being highly imperilled. A 14-member expert elicitation panel, consisting of a mix of taxon experts and government managers of threatened species, estimated that there was a > 50% chance that nine taxa would be extinct by 2041. The panel estimated that there was a > 50% likelihood that a further 16 taxa (considered extant under Australian legislation), for which there are no recent independently verified records, are already extinct, with four almost certainly extinct. For five of these taxa, there was a > 50% chance that they would persist for 20 more years if they are currently extant, notwithstanding the lack of recent records. Most of the taxa considered occur within conservation areas and in south-eastern Australia, where human population density is highest. All the highly imperilled taxa occur wholly or partly in conservation reserves, within a total reserved area of 1994 km2, 0.13% of the total area conserved in Australia. Highly imperilled taxa also occur on 313 km2 of non-conservation government-owned land, and 242 km2 of private land. The total area that needs management intervention to prevent extinction of Australia's most imperilled vertebrate taxa in the next 20 years represents 0.06% of the area of Australia's terrestrial and freshwater environments.

Sensitivity of the stripe-faced dunnart, Sminthopsis macroura (Gould 1845), to the insecticide, fipronil; implications for pesticide risk assessments in Australia

A lack of toxicity data quantifying responses of Australian native mammals to agricultural pesticides prompted an investigation into the sensitivity of the stripe-faced dunnart, Sminthopsis macroura (Gould 1845) to the insecticide, fipronil (5-amino-3-cyano-1-(2,6-dichloro-4-trifluoromethylphenyl)-4-trifluoromethylsulfinyl pyrazole, CAS No. 120068-37-3). Using the Up-And-Down method for determining acute oral toxicity in mammals (OECD) median lethal dose estimates of 990 mg kg−1 (95% confidence interval (CI) = 580.7–4770.0 mg kg−1) and 270.4 mg kg−1 (95% CI = 0.0–>20,000.0 mg kg−1) were resolved for male and female S. macroura, respectively. The difference between median lethal dose estimates for males and females may have been influenced by the older ages of two female dunnarts. Consequently, further modelling of female responses to fipronil doses used the following assumptions: (a) death at 2000 mg kg−1, (b) survival at 500 mg kg−1 and (c) a differential response (both survival and death) at 990 mg kg−1. This modelling revealed median lethal dose estimates for female S. macroura of 669.1 mg kg−1 (95% CI = 550–990 mg kg−1; assuming death at 990 mg kg−1) and 990 mg kg−1 (95% CI = 544.7–1470 mg kg−1; assuming survival at 990 mg kg−1). These median lethal dose estimates are 3–10-fold higher than available LD50 values of 94 mg kg−1 for a similarly sized eutherian mammal, Mus musculus (L. 1758) and 97 mg kg−1 for Rattus norvegicus (Birkenhout 1769). Implications for pesticide risk assessments in Australia are discussed.

Genome-wide SNPs detect fine-scale genetic structure in threatened populations of squirrel glider Petaurus norfolcensis

Australian arboreal mammals are experiencing significant population declines, particularly due to land clearing and resulting habitat fragmentation. The squirrel glider, Petaurus norfolcensis, is a threatened species in New South Wales, with a stronghold population in the Lake Macquarie Local Government Area (LGA) where fragmentation due to urbanization is an ongoing problem for the species conservation. Here we report on the use of squirrel glider mitochondrial (385 bp cytochrome b gene, 70 individuals) and nuclear DNA (6,834 SNPs, 87 individuals) markers to assess their population genetic structure and connectivity across 14 locations sampled in the Lake Macquarie LGA. The mitochondrial DNA sequences detected evidence of a historical genetic bottleneck, while the genome-wide SNPs detected significant population structure in the Lake Macquarie squirrel glider populations at scales as fine as one kilometer. There was no evidence of inbreeding within patches, however there were clear effects of habitat fragmentation and biogeographical barriers on gene flow. A least cost path analysis identified thin linear corridors that have high priority for conservation. These areas should be protected to avoid further isolation of squirrel glider populations and the loss of genetic diversity through genetic drift.

Counting the bodies: Estimating the numbers and spatial variation of Australian reptiles, birds and mammals killed by two invasive mesopredators

AbstractAimIntroduced predators negatively impact biodiversity globally, with insular fauna often most severely affected. Here, we assess spatial variation in the number of terrestrial vertebrates (excluding amphibians) killed by two mammalian mesopredators introduced to Australia, the red fox (Vulpes vulpes) and feral cat (Felis catus). We aim to identify prey groups that suffer especially high rates of predation, and regions where losses to foxes and/or cats are most substantial.LocationAustralia.MethodsWe draw information on the spatial variation in tallies of reptiles, birds and mammals killed by cats in Australia from published studies. We derive tallies for fox predation by (i) modelling continental‐scale spatial variation in fox density, (ii) modelling spatial variation in the frequency of occurrence of prey groups in fox diet, (iii) analysing the number of prey individuals within dietary samples and (iv) discounting animals taken as carrion. We derive point estimates of the numbers of individuals killed annually by foxes and by cats and map spatial variation in these tallies.ResultsFoxes kill more reptiles, birds and mammals (peaking at 1071 km−2 year−1) than cats (55 km−2 year−1) across most of the unmodified temperate and forested areas of mainland Australia, reflecting the generally higher density of foxes than cats in these environments. However, across most of the continent – mainly the arid central and tropical northern regions (and on most Australian islands) – cats kill more animals than foxes. We estimate that foxes and cats together kill 697 million reptiles annually in Australia, 510 million birds and 1435 million mammals.Main conclusionsThis continental‐scale analysis demonstrates that predation by two introduced species takes a substantial and ongoing toll on Australian reptiles, birds and mammals. Continuing population declines and potential extinctions of some of these species threatens to further compound Australia's poor contemporary conservation record.

The importance of appropriate taxonomy in Australian mammalogy

The use of correct taxonomy to describe and name the earth’s biodiversity is fundamental to conservation and management. However, there are issues that need to be overcome to ensure that the described taxa and their scientific names are both appropriate and widely adopted. Obstacles to this include the use of different species definitions, taxonomic instability due to accumulation of additional specimens in analyses and the progression of science that allows better resolution of species boundaries, and the inappropriate description and naming of new taxa without adequate scientific basis in self-published journals (known as ‘taxonomic vandalism’). In an effort to manage taxonomic instability, the Australasian Mammal Taxonomy Consortium (AMTC), an affiliated body of the Australian Mammal Society, has developed several tools that include: (1) a standardised list of Australian mammal common and scientific names; (2) recommendations for information that should be included in published species descriptions; and (3) support for the publication of aspidonyms (i.e. a scientifically acceptable name proposed to overwrite a pre-existing unscientific name). This review discusses these issues, reaffirms the foundations for appropriate taxonomic research, and provides guidelines for those publishing taxonomic research on Australian mammals.

Regional patterns of continuing decline of the eastern quoll†

Like many other Australian mammals, eastern quolls (Dasyurus viverrinus) were widespread in the south-east of mainland Australia but went extinct there during the 20th century. The species remained abundant in Tasmania until it rapidly declined from 2001 to 2003, coinciding with a period of unsuitable weather. We provide an updated analysis of eastern quoll population trends in Tasmania using a time series of annual spotlight counts (1985–2019) collected across most of the species’ range. Eastern quolls were widespread and abundant in Tasmania until the early 2000s. In addition to the previously documented severe decline in the early 2000s in the east and northeast, we present new evidence of an earlier decline in the north (mid-1990s) and a more recent decline in the south (~2009). Declines have continued unabated during the last decade, resulting in a ~67% decline since the late 1990s in the area with high quoll abundance. Although the major decline in the early 2000s coincided with unfavourable weather, the continuing and more recent declines suggest other undetermined causes are also involved. We can no longer assume the presence of eastern quolls in Tasmania ensures the species’ long-term survival, highlighting the urgent need to conserve the remaining populations in Tasmania.

Population demography of the Tasmanian short-beaked echidna (

Deriving estimates of demographic parameters and the processes driving them is crucial for identifying wildlife management options. The short-beaked echidna (Tachyglossus aculeatus) is the most widely distributed native Australian mammal, yet little is known of its population dynamics due to its cryptic nature. Consequently, assessment of the impacts of climate and threats on echidna populations has been difficult. We analyse 19 years (1996–2014) of mark–recapture data to estimate survival and reproductive rates of a Tasmanian population of short-beaked echidna, and to evaluate the influence of regional weather patterns on its demographics. Population size showed high year-to-year variation, ranging from 1 to 40 echidnas km2 across the study area. Known-fate modelling of radio-tracked individuals suggested that climatic conditions impacted survival; average longevity was estimated at 16.7 years but only 4.8 years when the total spring/summer rainfall was below 125 mm, and 6.25 in years when temperatures more frequently exceeded 32°C. Recruitment, estimated from Pradel analyses, was low in the population (β = 0.08) and not significantly affected by climate. These results are the first quantitative estimates of climate effects, survival, and recruitment for this species, and suggest that climate-enhanced drying and temperature increase would pose a threat to echidna populations in Tasmania.

Temperature variation in nest boxes occupied by arboreal mammals during winter in southern Australia

We investigated nest temperatures in nest boxes occupied by single lactating brush-tailed phascogales (n = 8 boxes) and 1–3 adult sugar gliders (n = 7 boxes) when overnight ambient temperature dropped to <5°C. Temperature in the nest decreased or increased rapidly as animals vacated or re-occupied their nests. In the hour following first night-time departure, temperatures in sugar glider nests dropped by 9°C but only by 4°C in phascogale nests. The slower rate in phascogale nests was due to the presence of nestlings. Phascogales returned repeatedly to the nest during the night, resulting in an average 15°C differential above ambient over the night (2200–0500 h). Gliders returned infrequently during the night, resulting in an average nest-ambient differential of 3–5°C. After departure some glider nests tracked ambient to <0°C. The ability of nests to insulate and moderate temperature fluctuations requires further study. Our study highlights that we have incomplete knowledge of many aspects of the nesting ecology of cavity-using Australian mammals.

Landscape-Scale Effects of Fire, Cats, and Feral Livestock on Threatened Savanna Mammals: Unburnt Habitat Matters More Than Pyrodiversity

Northern Australia has undergone significant declines among threatened small and medium-sized mammals in recent decades. Conceptual models postulate that predation by feral cats is the primary driver, with changed disturbance regimes from fire and feral livestock in recent decades reducing habitat cover and exacerbating declines. However, there is little guidance on what scale habitat and disturbance attributes are most important for threatened mammals, and what elements and scale of fire mosaics actually support mammals. In this study, we test a series of hypotheses regarding the influence of site-scale (50 × 50 m) habitat and disturbance attributes, as well as local-scale (1 km radius), meta-local scale (3 km), landscape-scale (5 km) and meta-landscape scale (10 km) fire mosaic attributes on mammal abundance and richness. We found that habitat cover (rock, perennial grass, and shrub cover) at the site-scale had a positive effect, and disturbance factors (feral cats, fire, feral livestock) had a negative influence on mammal abundance and richness. Models supported site-scale habitat and disturbance factors as more important for mammals than broader-scale (local up to meta-landscape scale) fire mosaic attributes. Finally, we found that increasing the extent of ≥ 4 year unburnt habitat, and having an intermediate percentage (ca. 25%) of recently burnt (1-year burnt) habitat within the mosaic, were the most important functional elements of the fire mosaic at broad scales for mammals. Contrary to expectations, diversity of post-fire ages (‘pyrodiversity’) was negatively associated with mammal abundance and richness. These results highlight the need for management to promote retention of longer unburnt vegetation in sufficient patches across savanna landscapes (particularly of shrub and fruiting trees), maintain low-intensity patchy fire regimes, reduce the extent of intense late dry season wildfires, and to reduce the impact of feral livestock. This study provides further evidence for the role of feral cats in northern Australian mammal declines, and highlights the need for increased research into the efficacy of cat control methodologies in reducing biodiversity impacts in these extensive landscapes.

Introduction to the special edition on overabundant macropods

Introduction to the special edition on overabundant macropods

Occupancy of chainsaw-carved hollows by an Australian arboreal mammal is influenced by cavity attributes and surrounding habitat

The creation of mechanically carved tree cavities to provide supplementary shelter for hollow-dependent wildlife is increasingly popular in conservation management programs. However, there is limited empirical evidence quantifying how the features of their design and broader placement within the landscape influence use by target fauna. In this study, we took a multi-scale approach to investigating the use of chainsaw hollows (CHs) by a target native arboreal marsupial, Krefft’s Glider Petaurus notatus. We hypothesized that Krefft’s Gliders would respond to attributes of: (1) the CH itself; (2) the tree into which it was installed; and (3) the habitat within the reserve in which it was located. We monitored occupancy (over 2.7 years, using a pole camera) of 48 CHs installed in live Eucalyptus trees across multiple reserves in Melbourne, Australia, plus visitation (over ∼3 months, using camera traps) to 40 of the CHs. Mixed models were used to relate the occupancy of CHs by Krefft’s Gliders to field-collected data on various attributes of CHs at all three scales. From a total of 35,219 visitations across the 40 CHs, we recorded 13 native hollow-dependent species (five mammals, eight birds) visiting CHs. During 14 pole-camera inspections, Krefft’s Glider occupied 60% of the 48 CHs at least once, with 4% used as maternal dens during breeding. Four exotic species were also recorded visiting and/or occupying CHs. Orientation and volume both significantly affected occupancy: Krefft’s Gliders were more likely to occupy larger CHs, and those facing north and west (possibly related to microclimate). Tree-scale attributes did not affect occupancy, but Krefft’s Gliders were more likely to occupy CHs further from reserve edges, and where local density of Black Wattles (Acacia mearnsii: an important food resource) and low vegetation cover (100–200 cm above ground) was increased. Our findings show that CHs can provide supplementary shelters for Krefft’s Gliders when natural hollows are limited. Practitioners should consider both the physical characteristics of the cavity (e.g. volume) and the surrounding habitat (e.g. availability of foraging resources) to enhance the use of CHs by target species. The ongoing availability of CHs to target species will also be influenced by their use by exotic species, and potential for closure as woundwood grows. In an Australian context, a lack of knowledge about the specific features of natural hollows to which hollow-dependent fauna respond, means it is critical for policy and management to prioritize the retention of mature hollow-bearing trees.