Experimental attenuated total reflectance (ATR) and Raman spectra for the synthesized ionic liquid 1-Ethyl-3-methylimidazolium hexafluorophosphate [EMIM+][PF6−] have been combined with the functional hybrid B3LYP and the 6-31G∗ and 6-311++G∗∗ basis sets in order to evaluate the coordination mode of [PF6−] anion and determine the its structural, electronic, topological and vibrational properties. The scaled quantum mechanical force fields (SQMFF) methodology allowed us to obtain a set of scaled force constants fitting the observed wavenumbers because, so far, they have not reported. Experimental ATR and Raman spectra for the ionic liquid [EMIM+][PF6−] in the solid phase are consistent with the corresponding predicted by using both levels of theory. Here, complete vibrational assignments of 72 normal modes of vibration expected for ionic liquid were performed by using B3LYP/6-311++G∗∗ level and considering that the [PF6−] anion adopts a bidentate coordination mode. Atomic Merz-Kollman (MK) charges and bond orders studies have revealed a distorted octahedral symmetry of anion in the ionic liquid and have suggested bidentate coordination of anion by two C–H⋯F hydrogen bonds, as experimentally was also proposed. Natural bond orbital (NBO) and atoms in molecules (AIM) calculations support the high stability of ionic liquid and its high dipole moment value. Frontier orbitals for the three species show that the [PF6−] anion increases the reactivity of ionic liquid. Here, we determine that the B3LYP/6-311++G∗∗ molecular force field for the ionic liquid [EMIM+][PF6−] with the bidentate coordination mode adopted by [PF6−] anion is well represented, as also was supported by the scaled force constants calculated for both C–H⋯F hydrogen bonds.