Atomic Arrangement Research Articles

Research on the Stability of Different Polar Surfaces in Aluminum Nitride Single Crystals

Wurtzite aluminum nitride (AlN) crystal has a non-centrosymmetric crystal structure with only a single axis of symmetry. In an AlN crystal, the electronegativity difference between the Al atom and N atom leads to a distortion of electron cloud distribution outside the nucleus and a spontaneous polarization (SP) along the c-axis direction. The N-polar surface along the directions of [000-1] has higher surface energy than the Al-polar surface along the directions of [0001]. Due to the different atomic arrangement, Al atoms on the Al-polar surface bond with O and OH− in the environment to generate Al2O3·xH2O, which prevents the reaction from occurring inside the crystal. After the Al2O3·xH2O dissolve in an alkaline environment, N atoms have three dangling bonds exposed on the surface, which can also protect OH− from destroying the internal Al-N bonds, so the Al-polar surface is more stable than the N-polar surface.

Connection based novel AL topological descriptors and structural property of the zinc oxide metal organic frameworks

Metal organic frameworks (MOFs) play a vital role in a variety of processes such as heterogeneous catalysis, heterogeneous gas purification and division, biocompatibility, toxicity, and biomedical applications. The Zinc-based MOFs, particularly, have gained prominence in the biomedical industry for applications such as drug delivery, biosensing, and cancer imaging, which has attracted the interest of researchers from around the world. Given the significant influence of molecular structure on the properties of MOFs, it is imperative to model and characterize this structure comprehensively to deepen our understanding and explore avenues for property enhancement. Topological indices are numerical parameters derived from the graph representation of molecules that quantify specific structural features. These indices provide insights into the connectivity and arrangement of atoms or nodes within the structure, offering information about its chemical, physical, or biological properties. In this study, the Zinc Oxide network structures are topologically modeled via connection numbers, and some novel topological descriptors viz. AL 1, AL 2, AL3, AL4, AL5, AL6, AL7andAL8 are computed by deriving mathematical closed form expressions for them. Based on the numerical results, a comparative analysis of the computed topological descriptors is also performed. The prediction potential and chemical applicability of these indices are investigated using the benchmark dataset of Octane Isomers and corresponding experimental values, correlating experimental and computed values through regression models.

Synergistic Combination of Sb2Si2Te6 Additives for Enhanced Average ZT and Single-Leg Device Efficiency of Bi0.4Sb1.6Te3-based Composites.

Thermoelectric materials are highly promising for waste heat harvesting. Although thermoelectric materials research has expanded over the years, bismuth telluride-based alloys are still the best for near-room-temperature applications. In this work, a ≈38% enhancement of the average ZT (300-473K) to 1.21 is achieved by mixing Bi0.4Sb1.6Te3 with an emerging thermoelectric material Sb2Si2Te6, which is significantly higher than that of most BiySb2-yTe3-based composites. This enhancement is facilitated by the unique interface region between the Bi0.4Sb1.6Te3 matrix and Sb2Si2Te6-based precipitates with an orderly atomic arrangement, which promotes the transport of charge carriers with minimal scattering, overcoming a common factor that is limiting ZT enhancement in such composites. At the same time, high-density dislocations in the same region can effectively scatter the phonons, decoupling the electron-phonon transport. This results in a ≈56% enhancement of the thermoelectric quality factor at 373 K, from 0.41 for the pristine sample to 0.64 for the composite sample. A single-leg device is fabricated with a high efficiency of 5.4% at ΔT = 164 K further demonstrating the efficacy of the Sb2Si2Te6 compositing strategy and the importance of the precipitate-matrix interface microstructure in improving the performance of materials for relatively low-temperature applications.

Analyzing fine scaling quantum effects on the buckling of axially-loaded carbon nanotubes based on the density functional theory and molecular mechanics method

In this paper, the quantum effects of fine scaling on the buckling behavior of carbon nanotubes (CNTs) under axial loading are investigated. Molecular mechanics and quantum mechanics are respectively utilized to study the buckling behavior and to obtain the molecular mechanics coefficients of fine-scale nanotubes. The results of buckling behavior of CNTs with different chiralities with finite and infinite dimensions are given, and a comparison study is presented on them. The differences between finite and infinite nanotubes reflect the quantum effects of fine scaling on the buckling behavior. In addition, the results show that the dimensional changes highly affect the mechanical properties and the buckling behavior of CNTs to certain dimensions. Moreover, dimensional changes have a significant effect on the critical buckling strain. Beside, in addition to the structure dimensions, the arrangement of structural and boundary atoms have a major influence on the buckling behavior.

High Temperature Electron Diffraction on Organic Crystals: In Situ Crystal Structure Determination of Pigment Orange 34.

Small molecule structures and their applications rely on good knowledge of their atomic arrangements. However, the crystal structures of these compounds and materials, which are often composed of fine crystalline domains, cannot be determined with single-crystal X-ray diffraction. Three-dimensional electron diffraction (3D ED) is already becoming a reliable method for the structure analysis of submicrometer-sized organic materials. The reduction of electron beam damage is essential for successful structure determination and often prevents the analysis of organic materials at room temperature, not to mention high temperature studies. In this work, we apply advanced 3D ED methods at different temperatures enabling the accurate structure determination of two phases of Pigment Orange 34 (C34H28N8O2Cl2), a biphenyl pyrazolone pigment that has been industrially produced for more than 80 years and used for plastics application. The crystal structure of the high-temperature phase, which can be formed during plastic coloration, was determined at 220 °C. For the first time, we were able to observe a reversible phase transition in an industrial organic pigment in the solid state, even with atomic resolution, despite crystallites being submicrometer in size. By localizing hydrogen atoms, we were even able to detect the tautomeric state of the molecules at different temperatures. This demonstrates that precise, fast, and low-dose 3D ED measurements enable high-temperature studies the door for general in situ studies of nanocrystalline materials at the atomic level.

Long‐term and short‐term plasticity independently mimicked in highly reliable Ru‐doped Ge2Sb2Te5 electronic synapses

AbstractIn order to fulfill the complex cognitive behaviors in neuromorphic systems with reduced peripheral circuits, the reliable electronic synapses mimicked by single device that achieves diverse long‐term and short‐term plasticity are essential. Phase change random access memory (PCRAM) is of great potential for artificial synapses, which faces, however, difficulty to realize short‐term plasticity due to the long‐lasting resistance drift. This work reports the ruthenium‐doped Ge2Sb2Te5 (RuGST) based PCRAM, demonstrating a series of synaptic behaviors of short‐term potentiation, pair‐pulse facilitation, long‐term depression, and short‐term plasticity in the same single device. The optimized RuGST electronic synapse with the high transformation temperature of hexagonal phase >380°C, the outstanding endurance >108 cycles, the low resistance drift factor of 0.092, as well as the extremely high linearity with correlation coefficients of 0.999 and 0.976 in parts of potentiation and depression. Further investigations also go insight to mechanisms of Ru doping according to thorough microstructure characterization, revealing that Ru dopant is able to enter GST lattices thus changing and stabilizing atomic arrangement of GST. This leads to the short‐term plasticity realized by RuGST PCRAM. Eventually, the proposed RuGST electronic synapses performs a high accuracy of ~94.1% in a task of image recognition of CIFAR‐100 database using ResNet 101. This work promotes the development of PCRAM platforms for large‐scale neuromorphic systems.

Canadian banknotes to explore the phenomenon of diffraction

Gratings and their well-known diffraction patterns are the basis of spectrometers to characterize light sources. Reciprocally, periodic peaks in the diffraction pattern of x-rays scattered by solids bring valuable information about the internal geometry of the crystal lattice, providing details about the arrangement of atoms in the solid. In both cases, periodic gratings are considered. What about non-periodic gratings? Is it possible to reconstruct any grating structure knowing its diffraction pattern? We answer this question by studying diffraction through the hologram hidden in a Canadian banknote. We measure the diffraction of near-infrared light to numerically reconstruct the grating structure using the Gerchberg–Saxton algorithm. We then compare this reconstructed grating structure with the picture of the grating structure observed with a phase-contrast microscope. Such an approach allows us to study diffraction from a perspective different from that usually taught at university.

Synthesis of 2-amino-5-methylpyridinium tetrachloridocadmate(II) (C6H9N2)2[CdCl4]: Structure, DFT-calculated descriptors and molecular docking study

In this research paper, (C6H9N2)2[CdCl4], was effectively synthesized using the slow solvent evaporation procedure. Single crystal X-ray diffraction (scXRD) analysis revealed that the compound crystallizes in the triclinic system, specifically in the space group P1¯. Powder XRD (PXRD) of the bulk material showed some minor impurities. The atomic arrangement of the title structure comprises discrete tetrahedral groups [CdCl4]2− linked to the organic entities through weak N(C)H…Cl hydrogen bonds. Solid-state contacts were further studied through Hirshfeld surface analyses, complemented by 2D fingerprint plots. Computational results, obtained using the B3LYP tool with 6-311++G(d,p) + LANL2DZ mixed basis set, demonstrated consistent geometrical, vibrational, and electronic features to the experimental data. Non-covalent interactions were explored in depth using Atoms-In-Molecule (AIM) and Reduced Density Gradient (RDG) analyses. Thermogravimetry (TG) and Differential Scanning Calorimetry (DSC) analyses showed melting at 378 K and decomposition at around 540 K. Furthermore, the inhibition activity of the examined compound was explored in-silico through molecular docking studies targeting the inducible Nitric Oxide Synthase (iNOS) enzymes.

Analysis of bistatic multiphoton quantum radar cross section for the cylindrical surface.

A closed-form model of bistatic multiphoton quantum radar cross section (QRCS) for the cylindrical surface, the main structure of typical aircraft, especially missiles, is established to analyze the system and scattering characteristics. The influence of curvature of the three-dimensional target on QRCS is analyzed. By comparing and analyzing the bistatic multiphoton QRCS for a cylinder and a rectangular plate, we find that the QRCS for the convex surface target is the extension of the QRCS for the planar target with inhomogeneous atomic arrangement intervals and patterns. The characteristics of cylindrical QRCS are discussed by combining the transceiver system and the photon number of the transmitted signal, and the influences of the cylindrical radius, cylindrical length, and incident photon number on QRCS are analyzed. The bistatic results provide guidance on potential strong scattering directions for the target under various directions of photon incidence. Compared with the plane target, the cylindrical target amplifies scattering intensity near the target surface at the scattering angle side in the bistatic system. A bistatic multiphoton quantum radar system can achieve sharpening and amplification of the main lobe of the QRCS for a cylinder in an extensive scattering angle range. Bistatic multiphoton quantum radar has better visibility for the cylinder with a smaller length. These characteristics will provide prior information for research in many fields, such as photonic technology, radar technology, and precision metrology.

Electronic and thermal properties of Nb2CCl2 MXenes

The molten salt synthesis has recently opened up new opportunities to functionalize two-dimensional MXenes with uniform halogen terminations. In this work, we synthesize Nb2CCl2 MXenes by etching the Al layer from the Nb2AlC precursor in the melt of CuCl2 Lewis acid. In Cl-terminated MXenes, intercalation of water is negligible, so that MXenes get closer to ideal, ordered van der Waals solids. We identify the preferential atomic stacking arrangement, which is of the AB type, as opposed to the AA stack assumed in previous works. We combine X-ray absorption near edge spectroscopy with density functional theory to clarify the local chemical environment of Cl atoms. Using vibrating sample magnetometry and specific heat measurements, we confirm that Nb2CCl2 MXenes are superconducting with a transition temperature of 6.0 K and find a Debye temperature of 320 K. We further show that the transition temperature slightly decreases with applied isostatic pressure.

Techniques for Theoretical Prediction of Immunogenic Peptides

Small peptides are an important component of the vertebrate immune system. They are important molecules for distinguishing proteins that originate in the host from proteins derived from a pathogenic organism, such as a virus or bacterium. Consequently, these peptides are central for the vertebrate host response to intracellular and extracellular pathogens. Computational models for prediction of these peptides have been based on a narrow sample of data with an emphasis on the position and chemical properties of the amino acids. In past literature, this approach has resulted in higher predictability than models that rely on the geometrical arrangement of atoms. However, protein structure data from experiment and theory are a source for building models at scale, and, therefore, knowledge on the role of small peptides and their immunogenicity in the vertebrate immune system. The following sections introduce procedures that contribute to theoretical prediction of peptides and their role in immunogenicity. Lastly, deep learning is discussed as it applies to immunogenetics and the acceleration of knowledge by a capability for modeling the complexity of natural phenomena.

Effects of the Hydroxy-Regulated Li-Montmorillonite Atomic Interface Arrangement on Li Cycle of Marine Sedimentation and pH.

The reaction of ubiquitous clay is related to the global cycle of the key metals, but the relationship between the Li occurrence interface and the sedimentation in the Li cycle remains unclear. We investigated the atomic interface arrangement of Li-montmorillonite (Li-Mt) during low-temperature water-rock reactions and Li migration. The results show that, in Cl-rich systems, deprotonation and exposure of Na adsorption sites cause Li enrichment and O pairing, which lead to the weakening of the shielding effect of Mt on anions and the formation of a Mt-Li-Cl atomically interfacial arrangement. Only up to 20.3% of the Li is contained in the atomic interface of Li-Mt. In F-rich system, the dehydroxylation of F paired with Al in octahedral sites causes Li accumulation via local crystallization of LiF, and co-complexation of F and Li forms a Mt(Al)-F-Li atomic interface, in which up to 46.8% of the Li is enriched by the Mt. The participation of F and Cl in the complexation intensifies lattice collapse of the Li-Mt edge. The sedimentation velocity decreases with the smaller particle size affected by the Li loading. Lithium leached from igneous rocks serves as the marine Li source, which contributes up to 99.8% and 99.5% of the Li in Cl- and F-rich systems, respectively. The response of Mt(OH) to Li migration with a time accumulating effect may make an important regulatory of oceanic pH by either acidification or alkalization.

Constructing Amorphous-Crystalline Interfacial Bifunctional Site Island-Sea Synergy by Morphology Engineering Boosts Alkaline Seawater Hydrogen Evolution.

The development of efficient and durable non-precious hydrogen evolution reaction (HER) catalysts for scaling up alkaline water/seawater electrolysis is highly desirable but challenging. Amorphous-crystalline (A-C) heterostructures have garnered attention due to their unusual atomic arrangements at hetero-interfaces, highly exposed active sites, and excellent stability. Here, a heterogeneous synthesis strategy for constructing A-C non-homogeneous interfacial centers of electrocatalysts on nanocages is presented. Isolated PdCo clusters on nanoscale islands in conjunction with Co3S4 A-C, functioning as a bifunctional site "island-sea" synergy, enable the dynamic confinement design of metal active atoms, resulting in excellent HER catalytic activity and durability. The hierarchical structure of hollow porous nanocages and nanoclusters, along with their large surface area and multi-dimensional A-C boundaries and defects, provides the catalyst with abundant active centers. Theoretical calculations demonstrate that the combination of PdCo and Co3S4 regulates the redistribution of interface electrons effectively, promoting the sluggish water-dissociation kinetics at the cluster Co sites. Additionally, PdCo-Co3S4heterostructure nanocages exhibit outstanding HER activity in alkaline seawater and long-term stability for 100h, which can be powered by commercial silicon solar cells. This finding significantly advances the development of alkaline seawater electrolysis for large-scale hydrogen production.

Atomic-scale observation and characterization of deformation twins in uniaxial tensile-deformed 120Mn13 steel

High-resolution transmission electron microscope was used to observe and characterize the different formation stages of zero-strain twins in uniaxial tensile-deformed 120Mn13 steel at the atomic scale, which revealed the growth process of zero-strain twins in coarse-grained austenitic manganese steels. Here, plenty of zero-strain twins are observed in deformed 120Mn13 steel and they can be formed by three types of precursors. Their processes of expansion and connection, thickening and thinning can be carried out through the transformation of 9R phase with the matrix and the twin. A new 9R phase with different stacking sequences is firstly discovered and defined as 9R-Ⅱ to distinguish it from the classical 9R phase (9R-Ⅰ). 9R-Ⅰ and 9R-Ⅱ have the same lattice structure but different internal atomic arrangements and satisfy a twin-like relationship. In addition, a new formation mechanism of zero-strain twins based on the 9R phase transformation is proposed.

Undoing band anticrossing in highly mismatched alloys by atom arrangement

The electronic structures of three highly mismatched alloys (HMAs)—GeC(Sn), Ga(In)NAs, and BGa(In)As—were studied using density functional theory with HSE06 hybrid functionals, with an emphasis on the local environment near the mismatched, highly electronegative atom (B, C, and N). These alloys are known for their counterintuitive reduction in the bandgap when adding the smaller atom, due to a band anticrossing (BAC) or splitting of the conduction band. Surprisingly, the existence of band splitting was found to be completely unrelated to the local displacement of the lattice ions near the mismatched atom. Furthermore, in BGaAs, the reduction in the bandgap due to BAC was weaker than the increase due to the lattice constant, which has not been observed among other HMAs but may explain differences among experimental reports. While local distortion in GeC and GaNAs was not the cause for BAC, it was found to enhance the bandgap reduction due to BAC. This work also found that mere contrast in electronegativity between neighboring atoms does not induce BAC. In fact, surrounding the electronegative atom with elements of even smaller electronegativity than the host (e.g., Sn or In) consistently decreased or even eliminated BAC. For a fixed composition, moving Sn toward C and In toward either N or B was always energetically favorable and increased the bandgap, consistent with experimental annealing results. Such rearrangement also delocalized the conduction band wavefunctions near the mismatched atom to resemble the original host states in unperturbed Ge or GaAs, causing the BAC to progressively weaken. These collective results were consistent whether the mismatched atom was a cation (N), anion (B), or fully covalent (C), varying only with the magnitude of its electronegativity, with B having the least effect. The effects can be explained by charge screening of the mismatched atom's deep electrostatic potential. Together, these results help explain differences in the bandgap and other properties reported for HMAs from different groups and provide insight into the creation of materials with designer properties.

Diverse high-pressure chemistry in Y-NH3BH3 and Y-paraffin oil systems.

The yttrium-hydrogen system has gained attention because of near-ambient temperature superconductivity reports in yttrium hydrides at high pressures. We conducted a study using synchrotron single-crystal x-ray diffraction (SCXRD) at 87 to 171 GPa, resulting in the discovery of known (two YH3 phases) and five previously unknown yttrium hydrides. These were synthesized in diamond anvil cells by laser heating yttrium with hydrogen-rich precursors-ammonia borane or paraffin oil. The arrangements of yttrium atoms in the crystal structures of new phases were determined on the basis of SCXRD, and the hydrogen content estimations based on empirical relations and ab initio calculations revealed the following compounds: Y3H11, Y2H9, Y4H23, Y13H75, and Y4H25. The study also uncovered a carbide (YC2) and two yttrium allotropes. Complex phase diversity, variable hydrogen content in yttrium hydrides, and their metallic nature, as revealed by ab initio calculations, underline the challenges in identifying superconducting phases and understanding electronic transitions in high-pressure synthesized materials.

Orientation Relationship of Intergrowth Al2Fe and Al5Fe2 Intermetallics Determined by Single-Crystal X-ray Diffraction

Although the Al2Fe phase has similar decagonal-like atomic arrangements as that of the orthorhombic Al5Fe2 phase, no evidence for intergrowth samples of Al2Fe and Al5Fe2 has been reported. In the present work, the co-existence of Al2Fe and Al5Fe2 phases has been discovered from the educts obtained with a nominal atomic ratio of Al:Fe of 2:1 by arc melting. First, single-crystal X-ray diffraction (SXRD) as well as scanning electron microscope (SEM) equipped with energy-dispersive X-ray spectroscopy (EDX) measurements have been utilized to determine the exact crystal structures of both phases, which are refined to be Al12.48Fe6.52 and Al5.72Fe2, respectively. Second, the orientation relationship between Al2Fe and Al5Fe2 has been directly deduced from the SXRD data sets, and the co-existence structure model has been constructed. Finally, four pairs of parallel atomic planes and their unique orientation relations have been determined from the reconstructed reciprocal-space precession images of (0kl), (h0l), and (hk0) layers. In addition, one kind of interface atomic structure model is constructed by the orientation relations between two phases, correspondingly.

Crystal-Like Atomic Arrangement and Optical Properties of 25La2O3-75MoO3 Binary Glasses Composed of Isolated MoO42.

Transparent and brown La2O3-MoO3 binary glasses were prepared in bulk form using a levitation technique. The glass-forming range was limited, with the primary composition being approximately 25 mol % La2O3. The 25La2O3-75MoO3 glass exhibited a clear crystallization at 546 °C, while determining its glass transition temperature was difficult. Notably, despite its amorphous nature, the glass possessed a density and packing density comparable to those of crystalline La2Mo3O12. X-ray absorption fine structure and Raman scattering analyses revealed that the glass structure closely resembles La2Mo3O12 due to the presence of isolated MoO42- units, whereas disordered atomic arrangement around La atoms was confirmed. The glass demonstrated transparency ranging from 378 to 5500 nm, and the refractive index at 1.0 μm was estimated to be 2.0. The optical bandgap energy was 3.46 eV, which was slightly smaller than that of La2Mo3O12. Additionally, the glass displayed a transparent region ranging from 6.5 to 8.0 μm. This occurrence results from the decreased diversity of MoOn units and connectivity of Mo-O-Mo, which resulted in the reduced overlap of multiphonon absorption. This glass formation, with its departure from conventional glass-forming rules, resulted in distinctive glasses with crystal-like atomic arrangements.

Uniaxial-Oriented Perovskite Films with Controllable Orientation.

Perovskite films with large crystal size, preferred orientation, and facile fabrication process, combining advantages of single-crystal and polycrystalline films, have gained considerable attention recently. However, there is little research on the facet properties of perovskite films. Here, (111)- and (001)-oriented perovskite films with bandgaps ranging from 1.53 to 1.77eV, and systematically investigated their orientation-dependent properties are achieved. The (111)-oriented films show electron-dominated traps and the (001)-oriented films show hole-dominated traps, which are related to their atomic arrangement at the surface. Compared with the (001)-oriented films, the (111)-oriented films exhibit lower work function and superior water/oxygen robustness. For the wide-bandgap films, the lattice of the (001)-oriented film provides an unobstructed passage for ion migration. Comparably, the (111)-oriented films exhibit suppressed ion migration and excellent phase stability. The optimized unencapsulated solar cells based on both (001) and (111) orientations show a similar high efficiency of ≈23%. The (111)-oriented solar cell exhibits excellent stability, maintaining 95% of its initial efficiency after 1500h maximum power point (MPP) tracking test, and 97% initial efficiency after 3000h aging in ambient conditions. This work paves the way for the rational design, controllable synthesis, and targeted optimization of uniaxial-oriented perovskite films for various electronic applications.

Nanoscale Localized Phonons at Al2O3 Grain Boundaries.

Nanoscale defects like grain boundaries (GBs) would introduce local phonon modes and affect the bulk materials' thermal, electrical, optical, and mechanical properties. It is highly desirable to correlate the phonon modes and atomic arrangements for individual defects to precisely understand the structure-property relation. Here we investigated the localized phonon modes of Al2O3 GBs by combination of the vibrational electron energy loss spectroscopy (EELS) in scanning transmission electron microscope and density functional perturbation theory (DFPT). The differences between GB and bulk obtained from the vibrational EELS show that the GB exhibited more active vibration at the energy range of <50 meV and >80 meV, and further DFPT results proved the wide distribution of bond lengths at GB are the main factor for the emergence of local phonon modes. This research provides insights into the phonon-defect relation and would be of importance in the design and application of polycrystalline materials.