Brazilian Atlantic Rainforest Research Articles

Aiouea ombrophila (Lauraceae), a new large tree from the wet mountains of the Atlantic Rainforest, Brazil

The study of tree species in the Brazilian Atlantic Rainforest continues to reveal new discoveries. Herbarium collections often harbor specimens that do not fit into known taxa. During our research, we encountered an unidentified Lauraceae specimen, prompting us to conduct fieldwork in the forest to investigate further. This study describes Aiouea ombrophila Brotto & Völtz, a large tree from the rainiest parts of the mountainous slopes of Minas Gerais, Rio de Janeiro and São Paulo states, Brazil, at elevations between 950 and 2000 m. We provide a comprehensive description of the new species, including illustrations, a distribution map, an extinction risk assessment, and a comparative table distinguishing it from other species.

Begonia tamoiana (Begoniaceae), a new species from Atlantic Forest of Rio de Janeiro State, Brazil

Begonia tamoiana is a new species endemic to Brazilian Atlantic Rainforest, a biome rich in endemism and species diversity, and it is described and illustrated herein. Begonia tamoiana is morphologically similar to B. magdalenensis but differs in having abaxial leaf blades with simple trichomes throughout (vs. 2-branched trichomes throughout) and ovate wings capsule (vs. triangular). A description, ecological comments, illustrations, color photographs, and a provisional IUCN conservation assessment of this species are provided. Begonia tamoiana is preliminarily classified as Vulnerable (VU) due to its very small populations and restricted distribution.

A New Species of Nealiolus Mason, 1974 (Hymenoptera: Braconidae) from Traditional Cocoa Agroforestry and Brazilian Atlantic Rainforest.

The genus Nealiolus Mason, 1974 (Hymenoptera: Braconidae, Brachistinae) is recorded for the first time in the Atlantic forest remnants and traditional cocoa agroforests, Theobroma cacao (Malvaceae) in the northeastern Brazilian region. A new species Nealiolus seb Silva, Shimbori & Fernandes sp. n. is described and named in honor of the "Sociedade Entomológica do Brasil - SEB", on the occasion of its fiftieth anniversary (golden jubilee). Digital images, map and an identification key for all Brazilian species of Nealiolus are provided.

Cultivation of a Wild Strain of Wood Ear Auricularia cornea from Brazil.

Auricularia cornea has become one of the most important cultivated mushrooms worldwide. Although not remarkably flavorful, Auricularia species are very versatile and rehydrate easily after drying, adding a unique and pleasing texture to the dishes. In this study, we collected, identified, and domesticated a wild strain of A. cornea from the Brazilian Atlantic Rainforest. The wild strain was evaluated for mycelial growth at different temperatures and substrates, biological efficiency, and nutritional composition. The temperature that best favored the A. cornea mycelium growth was 30°C, and the substrate was sterile Eucalyptus sawdust. The highest biological efficiency value obtained was 106.90 ± 13.28%. Nutritional analysis showed that the produced wood ears contained 71.02% carbohydrates, 19.63% crude fiber, 11.59% crude protein, 10.19% crude fat, and 4.24% ash on dry matter basis. For the mineral content profile, the elements K and P were the most abundant. This is the first report on cultivation of a wild strain of A. cornea from Brazil.

Trends in admission to the Wildlife Screening Center in Espírito Santo State, Brazil, from 2011 to 2021

Background and Aim: The Wild Animal Screening Center in Espírito Santo State (CETAS-ES), Brazil, treats wildlife from trafficking and illegal trade, accidents, captivity, and rescue from out of their habitat. The present study described the trends in wildlife admission to the CETAS-ES over the past 10 years and discussed the impact of animal exploitation. Materials and Methods: This descriptive study used a database provided by the CETAS-ES with data on animals admitted between 2011 and 2021, including admission year, origin, place of captivity, taxonomic category, sex, life stage, and health status. Results: Over 10 years, 23,176 animals were admitted, with an annual average of 2,106 admissions. Seizing was the most common origin (60.39%), followed by rescues/collections (22.60%) and voluntary delivery (11.7%), whereas 5.3% had unidentified origins. Birds were the most frequently admitted animals (80.6%) and were predominant among those seized (97.5%), rescued/collected (46.7%), and voluntarily delivered (73.2%). Mammals represented 45.0% of rescues/collections and reptiles represented 19.0% of voluntary deliveries. Conclusion: The admissions reveal a vulnerable scenario for wildlife in the Brazilian Atlantic Rainforest of Espírito Santo State, mainly affecting birds. Seizing was a common occurrence over the decade, reinforcing the necessity of actions to prevent wildlife trafficking and illegal trade. Keywords: Atlantic Rainforest, biodiversity, fauna, wildlife trade.

Parasites Diversity, Abundance, Prevalence, and Richness Infecting Didelphis aurita (Didelphimorphia: Didelphidae) in the Atlantic Rainforest, Brazil.

Parasites are key players in ecosystems, influencing population sizes and food webs, yet the impact of environmental factors on their diversity is not well understood. The Atlantic rainforest in Brazil, particularly the Parque Estadual das Fontes do Ipiranga (PEFI), exemplifies a biodiversity hotspot facing significant deforestation, housing diverse animal species such as the synanthropic Brazilian common opossum (Didelphis aurita), which serves as a reservoir for multiple zoonotic pathogens. In this study, we investigated parasite diversity, abundance, prevalence, and richness in free-living D. aurita in the PEFI, São Paulo, Brazil. From January 2015 to January 2017, 101 fecal samples of D. aurita were collected in two areas of PEFI, at the Instituto de Pesquisas Ambientais (IPA) and the Parque de Ciência e Tecnologia (Cientec), and analyzed using three different parasitological methods. In total, 99% of the samples were positive for at least one parasite. The most prevalent parasite belonged to the order Strongylida (82%), followed by Cruzia sp. (77%), the latter having a significantly higher prevalence at IPA. In contrast, Acanthocephala showed greater prevalence at Cientec. Co-infections were common, with some individuals harboring up to seven different parasites. Our findings reveal significant parasite diversity in the D. aurita population at PEFI, including both helminths and protozoan trophozoites, some of which are reported for the first time in this host species. Further research is essential for accurate species identification of the observed parasites.

Contribution to the taxonomy of Oxytrigona Cockerell, 1917 (Apidae, Meliponini)

The stingless bees of the genus Oxytrigona Cockerell are popularly known as “fire bees”, due to their unique habit of spitting a caustic secretion when disturbed. Currently, this neotropical genus includes 11 valid species distributed from southern Brazil, throughout most of South and Central America, reaching southern Mexico. They are especially diverse in the Amazon, where five species are recorded. Although Oxytrigona exhibits a very distinctive morphology in relation to other stingless bees, species are often difficult to identify, having blurred limits due to intraspecific variation. In the present contribution the taxonomy of Oxytrigona is revisited, based on novel findings since the last taxonomic accounts were made. Oxytrigona tataira (Smith, 1863) is reinterpreted on the basis of new evidence regarding the provenance of its type material. The whereabouts of the type material of Oxytrigona cagafogo (Müller, 1874) sp. ressur. are discussed, and the species is resurrected from synonymy, representing a common bee occurring in the Atlantic rainforest of Brazil. Oxytrigona huaoranii Gonzalez & Roubik, 2008 is considered a junior synonym of Oxytrigona mellicolor (Packard, 1869) syn. nov., and the identity of the species is clarified. The whereabouts of the type material of Oxytrigona flaveola (Friese, 1900) are discussed. Three new species are described: Oxytrigona banana sp. nov. from Brazil and Paraguay; Oxytrigona pallida sp. nov. from northern South America and Central America; and Oxytrigona sauronica sp. nov. from Colombia. Distribution maps and a revised key are provided. Although the taxonomy of Oxytrigona species has been improved, questions remain about some species complexes. Implementation of tools from phylogeography is encouraged in order to improve our understanding of the species boundaries.

Does host migration affect host-parasite interaction? Migrant birds harbor exclusive parasites but have similar roles in parasite-host networks.

Parasites comprise a substantial portion of global biodiversity and play critical roles in shaping ecosystems by modulating trophic networks and affecting their hosts' abundance and distribution. The dynamics of host migration introduce new complexity to these relationships. From the host perspective, migratory behavior can either act as a defense mechanism or augment exposure to a broader spectrum of pathogens. Conversely, for parasites, host migration represents a mechanism for their dispersion and an opportunity to infect new host species. This study investigates the complex interplay between migration and parasite-host interactions, focusing on the interaction between hosts and avian malaria and malaria-like parasites in the Brazilian Atlantic Rain Forest. We captured 1466 birds representing 70 different species, uncovering 322 infections with Plasmodium/Haemoproteus parasites. We observed variations in migration timing and fluctuations in host abundance across months. By comparing the observed patterns of interaction of migratory and non-migratory birds to patterns of interaction expected at random, we show that migration affects the roles hosts take in the parasite-host network. Interestingly, despite the fact migratory species hosted more exclusive and distinct parasites, migrants did not occupy central network positions, which are mostly occupied by resident birds. Overall, we highlight the role of resident birds as a key species within parasite-host communities and the high specialization among avian haemosporidians and their hosts.

Eugenia (Myrtaceae) from Reserva Natural Vale, Espírito Santo, a center of plant endemism in the Brazilian Atlantic Rainforest

Eugenia includes ca. 1,100 species worldwide and is the richest angiosperm genus of Brazilian flora with a remarkable biodiversity in the Atlantic Rainforest. In Espírito Santo state, the central-north region conserves the biggest forest fragment and is composed by the lowland coastal forests known as Tabuleiro. Considering the scarcity of studies approaching this vegetation and the high diversity of Eugenia species, this work presents a taxonomic treatment of Eugenia species from Reserva Natural Vale. The study area is located at the municipalities of Linhares and Sooretama, in the northern part of the coastal mesoregion of the state. For the taxonomic treatment, fieldwork was carried out between August 2015 and March 2019 and herbarium collections of BHCB, CVRD, CEPEC, ESA, HRCB, HPL, HUFSJ, ICN, K, MBM, MBML, RB, RBR, SORO, SP, SPF, SPSF, UB, UEC, and VIES were consulted, as well as images of nomenclatural types available online. This work points out the occurrence of 48 species of Eugenia within Reserva Natural Vale, encompassing 48% of the Eugenia species recorded in the Espírito Santo state. Six of them are presented as new occurrences for the reserve (Eugenia arenaria, E. disperma, E. florida, E. handroi, E. pachnantha and E. schottiana); two (E. pachnantha and E. schottiana) are first recorded for the state; E. adenophylla and E. infuscata are described as new. Eugenia adenophylla, E. atlantica, Eugenia cataphyllea, E. flavicarpa, E. hispidiflora, E. ochracea, E. penduliflora, and E. soteriana are endemic to Tabuleiro coastal forest, and E. handroi is the only record for Espírito Santo state. The most useful characters to distinguish the species are hair colours, especially in the floral structures, midvein on the adaxial surface of leaf blades, inflorescence type, connation and persistence of bracteoles, and the presence or absence of indumentum on the flowers’ hypanthia. Furthermore, morphological descriptions, distribution and phenology data, taxonomic comments, species illustrations, and an identification key for the species in the reserve are presented.

Begonia isadorae (Begoniaceae), a new endemic species from Ilha Grande, an island in southeastern Brazil, with notes on leaf anatomy

Begonia isadorae is a new species endemic to an island of Brazilian Atlantic Rainforest, a biome rich in endemism and species diversity, and it is described and illustrated herein. Begonia isadorae belongs to B. sect Pritzelia (Klotzsch) A.DC. and it is morphologically similar to B. rubropilosa A.DC. sharing the same leaf blade shape and habit but differs in its puberulous to glabrescent adaxial leaf blades (vs. scabrous), puberulous tepals (vs. squamulose), and ovary with entire placentae (vs. bilamellate). A diagnosis, description, ecological comments, taxonomic and leaf anatomy notes, illustrations, and color photographs are provided. Begonia isadorae is preliminarily classified as Vulnerable (VU) due to its very small populations and restricted distribution.

Overcoming the lack of distribution data for range‐restricted habitat specialist frogs

AbstractWith over 40% of species threatened with extinction, the distributional range of most amphibians is still unknown, generating uncertainty whether species are naturally rare, under‐sampled, or difficult to detect. We implemented a modelling approach that uses bromeliads as surrogates to predict the distribution of habitat specialist frogs that lack distributional data. We aimed to predict and survey potential new sites for the occurrence of a rare and microendemic bromeliad‐dwelling frog from the Atlantic Rainforest of Brazil. We used Maxent to predict suitable areas based on climate and topographic profiles, combined with 21 occurrence records of bromeliads within which our target frog species (Crossodactylodes itambe) is strictly restricted. The bromeliad‐based models identified four areas potentially suitable, and subsequent surveys revealed an entirely new species of a rare bromeliad‐dwelling frog in one of the areas. We demonstrate that using easy‐to‐survey surrogate species that have a strong relationship with species that are hard to detect has enormous potential to reveal crucial information on the potential ranges and distribution of cryptic taxa. Such a surrogate modelling approach could be extended to other habitat specialist species that lack distribution data, such as amphibians restricted to specific refugia and/or reproduction sites. This could improve the targeting of surveys and increase understanding of the patterns of rarity and the drivers of species distribution, especially for areas with high endemicity and range‐restricted frogs.

Combining LiDAR and Spaceborne Multispectral Data for Mapping Successional Forest Stages in Subtropical Forests

The Brazilian Atlantic Rainforest presents great diversity of flora and stand structures, making it difficult for traditional forest inventories to collect reliable and recurrent information to classify forest succession stages. In recent years, remote sensing data have been explored to save time and effort in classifying successional forest stages. However, there is a need to understand if any of these sensors stand out for this purpose. Here, we evaluate the use of multispectral satellite data from four different platforms (CBERS-4A, Landsat-8/OLI, PlanetScope, and Sentinel-2) and airborne light detection and ranging (LiDAR) to classify three forest succession stages in a subtropical ombrophilous mixed forest located in southern Brazil. Different features extracted from multispectral and LiDAR data, such as spectral bands, vegetation indices, texture features, and the canopy height model (CHM) and LiDAR intensity, were explored using two conventional machine learning methods such as random trees (RT) and support vector machine (SVM). The statistically based maximum likelihood (MLC) algorithm was also compared. The classification accuracy was evaluated by generating a confusion matrix and calculating the kappa index and standard deviation based on field measurements and unmanned aerial vehicle (UAV) data. Our results show that the kappa index ranged from 0.48 to 0.95, depending on the chosen dataset and method. The best result was obtained using the SVM algorithm associated with spectral bands, CHM, LiDAR intensity, and vegetation indices, regardless of the sensor. Datasets with Landsat-8 or Sentinel-2 information performed better results than other optical sensors, which may be due to the higher intraclass variability and less spectral bands in CBERS-4A and PlanetScope data. We found that the height information derived from airborne LiDAR and its intensity combined with the multispectral data increased the classification accuracy. However, the results were also satisfactory when using only multispectral data. These results highlight the potential of using freely available satellite information and open-source software to optimize forest inventories and monitoring, enabling a better understanding of forest structure and potentially supporting forest management initiatives and environmental licensing programs.

Bioluminescence - The Vibrant Glow of Nature and its Chemical Mechanisms.

Bioluminescence, the mesmerizing natural phenomenon where living organisms produce light through chemical reactions, has long captivated scientists and laypersons alike, offering a rich tapestry of insights into biological function, ecology, evolution as well as the underlying chemistry. This comprehensive introductory review systematically explores the phenomenon of bioluminescence, addressing its historical context, geographic dispersion, and ecological significance with a focus on their chemical mechanisms. Our examination begins with terrestrial bioluminescence, discussing organisms from different habitats. We analyze thefireflies of Central Europe's meadows and the fungi in the Atlantic rainforest of Brazil. Additionally, we inspect bioluminescent species in New Zealand, specifically river-dwelling snails and mosquito larvae found in Waitomo Caves. Our exploration concludes in the Siberian Steppes, highlighting the area's luminescent insects and annelids. Transitioning to the marine realm, the second part of this review examines marine bioluminescent organisms. We explore this phenomenon in deep-sea jellyfish and their role in the ecosystem. We then move to Toyama Bay, Japan, where seasonal bioluminescence of dinoflagellates and ostracods present a unique case study. We also delve into the bacterial world, discussing how bioluminescent bacteria contribute to symbiotic relationships. For each organism, we contextualize its bioluminescence, providing details about its discovery, ecological function, and geographical distribution. A special focus lies on the examination of the underlying chemical mechanisms that enables these biological light displays. Concluding this review, we present a series of practical bioluminescence and chemiluminescence experiments, providing a resource for educational demonstrations and student research projects. Our goal with this review is to provide a summary of bioluminescence across the diverse ecological contexts, contributing to the broader understanding of this unique biological phenomenon and its chemical mechanisms serving researchers new to the field, educators and students alike.

Molecular diversity and polyparasitism of avian trypanosomes in the Brazilian Atlantic Rainforest.

The current study proposes to investigate the diversity and phylogeny of trypanosomes parasitizing wild birds from the Brazilian Atlantic Forest. Cytological examination was carried out by light microscopy of blood smears and positive birds were selected for amplification of the 18S rDNA sequence through PCR. The resulting amplicons were subjected to purification, cloning, and sequencing analysis. Phylogenetic reconstruction was conducted, including all avian trypanosomes representative's lineages. A total of ten bird samples from species of Turdus flavipes (N=1/12), T. albicollis (N=1/8), Tachyphonus coronatus (N=6/121), Thamnophilus caerulescens (N=1/22) and Synallaxis spixi (N=1/8) were positive for Trypanosoma spp. In the six specimens of T. coronatus, five distinct lineages of Trypanosoma spp. 18S-rRNA were observed in ninety sequences obtained, and using the strategy of cloning independent PCR, it was possible to observe that two of them were related to T. avium (JB01/JB02), and three were closed related to T. bennetti (JB03/ JB04/JB05). Addionaly, all fifteen sequences obtained from T. caerulescens/ S. spixi/T. flavipes/T. albicollis were identical. The present research is the first study to access molecular diversity and polyparasitism by avian trypanosomes in Brazil. The current research exhibits the wide genetic variability in avian trypanosomes and its non-specific relationship with its avian hosts.

Substrates and containers influence the growth of Campomanesia phaea (O. Berg. Landrum) seedlings, an endangered Atlantic Rainforest species

Native to the Brazilian Atlantic Rainforest, cambuci fruits can be consumed either in natura or in the processed form, and cambuci trees can be used to recover degraded areas. However, studies regarding cambuci germination and seedling development are scarce. The main aim of this study was to understand how different substrates and containers influence the growth of cambuci seedlings. To this end, two experiments were conducted: five different substrates were tested in the first experiment, and based on the multivariate analysis of the first experiment, the effect of combination of the best-performing substrates and three commonly employed plant growth containers on seedling development was investigated. Overall, good quality cambuci seedlings were obtained when they were grown in the commercial pine bark substrate and peat and perlite mixture in a 260 cm3 container.

Bark wings are related to the primary vascular system: the case of Piptadenia gonoacantha (Leguminosae)

Abstract Bark wings are projections commonly interpreted as plant protective structures against herbivory. Their location in stems has been typically thought to be random, something that here we dispute, using Piptadenia gonoacantha as a case study. We collected stem samples from several specimens in different developmental stages from natural populations in the Brazilian Atlantic rainforest. These stems were studied in detail under light microscopy to determine the formation of bark wings and their possible correlation with other anatomical features. Stems of P. gonoacantha are deeply lobed during primary growth, with each lobe containing a large vascular bundle, alternating with smaller vascular bundles in the interlobes. On top of these lobes, prickles develop, being composed of epidermal tissue and the cortex beneath. Some of the eight lobes merge and a phellogen is installed on top of them, which starts to produce a large sheath of phellem, which will become the conspicuous bark wings of Piptadenia. The phellogen switches on and off, leaving marks resembling growth rings. The bark wings in Piptadenia have very specific positioning, always in the front of five to eight major vascular bundles, indicating that bark wings appear always in very precise locations.

Novelties and nomenclatural notes in Pabstiella (Orchidaceae) from the Brazilian Atlantic Rainforest of Bahia and Espírito Santo

Three new species of Pabstiella from Espírito Santo and Bahia in Brazil are described and illustrated, with digital plates, comparative figures, and annotations on their ecology provided. The species are compared with similar taxa, and their phylogenetic placement is hypothesized based on their morphology. In addition, five species are proposed as synonyms, P. teschiana and P. henrique-aragonii as synonyms of P. crenata, P. wanderbildtiana as synonym of P. aurantiaca, P. osculator as synonym of P. rhombilabia and P. menegattii as synonym of P. decurva. A respective taxonomic discussion is provided for each case, and a lectotype is selected for P. aurantiaca.

Variation in a Darwin Wasp (Hymenoptera: Ichneumonidae) Community along an Elevation Gradient in a Tropical Biodiversity Hotspot: Implications for Ecology and Conservation.

Understanding how biodiversity varies from place to place is a fundamental goal of ecology and an important tool for halting biodiversity loss. Parasitic wasps (Hymenoptera) are a diverse and functionally important animal group, but spatial variation in their diversity is poorly understood. We survey a community of parasitic wasps (Ichneumonidae: Pimplinae) using Malaise traps up a mountain in the Brazilian Atlantic Rainforest, and relate the catch to biotic and abiotic habitat characteristics. We find high species richness compared with previous similar studies, with abundance, richness, and diversity peaking at low to intermediate elevation. There is a marked change in community composition with elevation. Habitat factors strongly correlated with elevation also strongly predict changes in the pimpline community, including temperature as well as the density of bamboo, lianas, epiphytes, small trees, and herbs. These results identify several possible surrogates of pimpline communities in tropical forests, which could be used as a tool in conservation. They also contribute to the growing evidence for a typical latitudinal gradient in ichneumonid species richness, and suggest that low to medium elevations in tropical regions will sometimes conserve the greatest number of species locally, but to conserve maximal biodiversity, a wider range of elevations should also be targeted.

Taxonomic Revision of Serpocaulon (Polypodiaceae)

We present a taxonomic revision of Serpocaulon A. R. Sm. (Polypodiaceae), a tropical American fern genus. Our work is based on a morphological analysis of 56 characters recorded from 2167 specimens deposited in 41 herbaria. Field trips were carried out in Argentina, Bolivia, Brazil, Colombia, Costa Rica, Ecuador, Panama, and Peru, where observations on the habit and habitat of several species were made. Digital images were also consulted. A total of 260 names were found and their nomenclatural types were studied, resulting in the lectotypification of 47 names (first-step 30, second-step 17 names). We recognize 37 species and five hybrids in Serpocaulon; one of the hybrids is given a new status (S. ×semipinnatifidum (Fée) A. R. Sm.) and another one is described (S. ×tabuleirense D. Sanín & Salino). Moreover, 19 names are newly synonymized, five species are excluded, 17 names are considered as of uncertain application, and five as nomina nuda. We document for 22 species a total of 62 chorological novelties in different countries. The elevational range of the genus is 0–4200 m. The Andes of Ecuador and Colombia are the main center of diversity and endemism; secondarily, the Atlantic Rain Forest of Brazil has five endemic species. We provide a taxonomic key, descriptions, discussions, local names, uses, illustrations, photographs of the plants in the field, microphotographs of the rhizome scales and the spores, and distribution maps of all species.

Eoscyphella luciurceolata gen. and sp. nov. (Agaricomycetes) Shed Light on Cyphellopsidaceae with a New Lineage of Bioluminescent Fungi.

During nocturnal field expeditions in the Brazilian Atlantic Rainforest, an unexpected bioluminescent fungus with reduced form was found. Based on morphological data, the taxon was first identified as belonging to the cyphelloid genus Maireina, but in our phylogenetic analyses, Maireina was recovered and confirmed as a paraphyletic group related to genera Merismodes and Cyphellopsis. Maireina filipendula, Ma. monacha, and Ma. subsphaerospora are herein transferred to Merismodes. Based upon morphological and molecular characters, the bioluminescent cyphelloid taxon is described as the new genus Eoscyphella, characterized by a vasiform to urceolate basidiomata, subglobose to broadly ellipsoid basidiospores, being pigmented, weakly to densely encrusted external hyphae, regularly bi-spored basidia, unclamped hyphae, and an absence of both conspicuous long external hairs and hymenial cystidia. Phylogenetic analyses based on ITS rDNA and LSU rDNA support the proposal of the new genus and confirm its position in Cyphellopsidaceae. Eoscyphella luciurceolata represents a new lineage of bioluminescent basidiomycetes with reduced forms.