Proppant-laden fluid injection has been applied to many low permeability reservoirs, such as coal seams, to enhance permeability and thus production. While there are several laboratory-scale experimental studies on proppant placement in hydraulic fractures, the possible infiltration of proppant into natural fractures and its effect on overall permeability has received little attention. We study proppant injection into a naturally fractured coal sample by a combination of experimental and digital rock technologies. The sample was imaged using a helical X-ray computed tomography (micro-CT) scanner in as-received condition. Then, proppants of different size ranges were gradually injected into the sample, using a purpose-built X-ray transparent core flooding system, and the permeability was measured at different effective stresses. Subsequently, the propped sample was re-imaged and registered to the as-received image to map the internal changes. The experimental results indicated almost no permeability change of the sample after proppant injection. While proppant collection in the outlet proved passage of the proppant through the sample, observation of the sample indicated that some of the proppants were accumulated on the inlet face of the core and created a filter leading to no permeability increment. Micro-CT images confirmed that proppants were effectively placed in the sample and kept the fractures open. Numerical computation of permeability, using the digital coal sample in which accumulated proppants at the coal surface were excluded, indicated a significant increase in the sample permeability. Such an increase resulted from the opening of the fractures, particularly in the outlet region. This demonstrated the significance of proppant size selection for coal seam hydraulic fracturing. While proppants were successfully placed in the fractures, the experiment measured the permeability of the system, including proppants accumulated on the inlet, and could not effectively map the internal changes. This, therefore, needs to be considered when an experimental program for proppant injection is executed. To accurately monitor the internal changes, application of digital rock technology is recommended for such experiments.