Arsenic-contaminated Soil Research Articles

New clusters of arsenite oxidase and unusual bacterial groups in enrichments from arsenic-contaminated soil

In the present study cultivation-dependent and molecular methods were applied in combination to investigate the arsenite-oxidizing communities in enrichment cultures from arsenic and lead smelter-impacted soils with respect to both 16S rRNA and arsenite oxidase gene diversity. Enrichments with arsenite as the only electron donor resulted in completely different communities than enrichments with yeast extract and the simultaneous presence of arsenite. The lithoautotrophic community appeared to be dominated by Ferrimicrobium-related Actinobacteria, unusual Acidobacteria, Myxobacteria, and α-Proteobacteria but the heterotrophic community comprised many Dokdonella-related γ-Proteobacteria. Gene sequences of clones encoding arsenite oxidase from the enrichment for lithoautotrophs belonged to three major clusters with sequences from non-cultivated microorganisms. So, primers used to detect arsenite oxidase genes could amplify the genes from many α-, β- and γ-Proteobacteria, but not from various strains of the other phyla present in the enrichment for lithotrophs. This was also observed for the isolates where arsenite oxidase genes from new proteobacterial isolates of the genera Burkholderia, Bosea, Alcaligenes, Bradyrhizobium and Methylobacterium could be amplified but the genes of the new Rhodococcus isolate S43 could not. The results indicate that the ability to oxidize arsenite is widespread in various unusual taxa, and molecular methods for their detection require further improvement.

Genetic effect on phytoaccumulation of arsenic in Brassica juncea L

The presence of excessive amounts of heavy metals such as arsenic in the environment is a problem in many parts of the world. Many countries e.g., Bangladesh are already severely affected by arsenic contamination of soil and groundwater. Phytoaccumulation is a method in which plants are used to uptake heavy metals from soil. The genus Brassica has many species that can efficiently accumulate arsenic. Despite many studies on phytoaccumulation, little is known about the genetics of phytoaccumulation of Brassica. This study investigated the genetic effect on phytoaccumulation of arsenic in Brassica juncea L. and attempted to identify any morphological trait(s) for phytoaccumulation. Two cultivars of B. juncea namely, B. juncea cv. Rai and B. juncea cv. BARI-11 were chosen as parents for the study. A set of their morphological characteristics were selected to evaluate their potential as marker(s) for phytoaccumulation. A single concentration, 15 ppm of arsenic was used to study the genetic effect on phytoaccumulation using quantitative genetics. The results revealed that phytoaccumulation of arsenic (by the root and shoot systems) is heritable in the broad sense and polygenic in nature. The stem diameter was also found to be heritable in the broad sense and path analysis indicated that it has a significant direct effect on the shoot uptake. It is concluded that phytoaccumulation of arsenic in B. juncea (cvs. Rai and BARI-11) is a genetic phenomenon and stem diameter may be a potential marker of phytoaccumulation of arsenic in B. juncea (cvs. Rai and BARI-11).

Espécies tropicais de pteridófitas em associação com fungos micorrízicos arbusculares em solo contaminado com arsênio

The symbiosis of plants with mycorrhizal fungi represents an alternative to be considered during the processes of revegetation and rehabilitation of arsenic-contaminated soil. The aim of this study was to evaluate under greenhouse conditions the effect of arsenic on the mycorrhizal association of two species of tropical fern (Thelypteris salzmannii and Dicranopteris flexuosa). T. salzmannii had higher rates of colonization and higher density of spores while D. flexuosa showed greater sensitivity to smaller concentrations of arsenic and association with mycorrhizal fungi. Our results indicate that screening and selection of mycorrhizal fungal isolates/species is possible and effective for phytoremediation of arsenic-contaminated soils.

Pilot Scale Ex-Situ Electrokinetic Remediation of Arsenic-Contaminated Soil

In this study, the effectiveness of ex situ electrokinetic remediation (EKR) in treating actual As-contaminated soil was evaluated at a pilot scale (1 m [W] × 1 m [L] × 1.5 m [H]). Ethylenediamine tetraacetic acid (EDTA) and sodium hydroxide as the catholyte and anolyte, respectively, were circulated to enhance the desorption of As. Two types of soil were collected from a real contaminated agricultural area: silty loam from a rice paddy and sandy clay loam from dry land. An average of 78% of the As was removed from the two types of soil after 8 weeks, and the residual As concentration met the level set by Korean legal regulations. The average removal rates were 1.06 and 1.55 mg/kg/day, respectively, for the paddy and dry field soil samples. In addition, fractionation analysis showed that most other fractions and even a large portion of the residual fraction were removed after EKR. The ex situ application provided electrolyte more uniformly to the entire soil sample; therefore, there was no significant variation in As removal depending on the depth of the soil. These results indicated that ex situ EKR is an effective technique for the remediation of As-contaminated sites.

Arsenic-Induced Straighthead: An Impending Threat to Sustainable Rice Production in South and South-East Asia!

Straighthead is a physiological disorder of rice (Oryza sativa L.) that results in sterile florets with distorted lemma and palea, and the panicles or heads may not form at all in extreme cases. Heads remain upright at maturity, hence the name 'straighthead'. The diseased panicles may not emerge from the flag leaf sheath when the disease is severe. Straighthead disease in rice results in poorly developed panicles and significant yield loss. Although other soil physicochemical factors involved, arsenic contamination in soil has also been reported to be closely associated with straighthead of rice. Monosodium methanearsonate has been a popular herbicide in cotton production in the USA, which has shown to cause injuries in rice that are similar to straighthead. Since toxicity of inorganic arsenic (iAs) is higher than other forms of arsenic, it may produce a more severe straighthead disorder in rice. The use of iAs-rich groundwater for irrigation, and the increase of iAs concentrations in agricultural soil in arsenic epidemic South and South-East Asia may cause a high incidence of straighthead in rice, resulting in a threat to sustainable rice production in this region.

Natural attenuation of arsenic in soils near a highly contaminated historical mine waste dump

Arsenic-contaminated soils near historical As-rich mine waste in Jáchymov (Czech Rep.), resulting from the smelting and seepage of the mine waste pore water, were studied to examine As partitioning between solid phases and pore waters. Mineralogical and geochemical analyses showed that As is exclusively associated with unidentified amorphous Fe oxyhydroxides, poorly crystalline goethite and hematite as adsorbed and coprecipitated species (with up to 3.2wt.% As). Adsorption of As by Fe oxyhydroxides is likely to be a major control on the migration of As in the soil pore water containing only up to 15μgL−1 As(V). The slight variations in the dissolved As(V) concentrations do not follow the total contents of As in the soil or adsorbed As, but appeared to be a function of pH-dependent sorption onto Fe oxyhydroxides. The geochemical modelling using PHREEQC-2 supported the efficiency of As(V) adsorption by Fe oxyhydroxides in the soil affected by As-rich waste solution seepage. It also suggested that active Fe oxyhydroxides has a strong attenuation capacity in soil that could effectively trap the aqueous As(V) from the unremitting waste seepage for the next approx. 11600years.

XAFS study of starch-stabilized magnetite nanoparticles and surface speciation of arsenate

It has been shown that starch can effectively stabilize nanoscale magnetite particles, and starch-stabilized magnetite nanoparticles (SMNP) are promising for in situ remediation of arsenic-contaminated soils. However, a molecular level understanding has been lacking. Here, we carried out XAFS studies to bridge this knowledge gap. Fe K-edge XAFS spectra indicated that the Fe–O and Fe–Fe coordination numbers of SMNP were lower than those for bare magnetite particles, and these coordination numbers decreased with increasing starch concentration. The decrease in the average coordination number at elevated stabilizer concentration was attributed to the increase in the surface-to-volume ratio. Arsenic K-edge XAFS spectra indicated that adsorbed arsenate on SMNP consisted primarily of binuclear bidentate (BB) complexes and monodentate mononuclear (MM) complexes. More BB complexes (energetically more favorable) were observed at higher starch concentrations, indicating that SMNP not only offered greater adsorption surface area, but also stronger adsorption affinity toward arsenate.

Effects of sulfur application on sulfur and arsenic absorption by rapeseed in arsenic-contaminated soil

A pot experiment was conducted to study the effects of arsenic (As) and sulfur (S) interaction on yield and their accumulation and distribution in rapeseed (Brassica napus L.). The results showed that (1) at the same level of S treatment, application of As significantly decreased rapeseed grain and biomass yield; (2) Application of S significantly increased the grain and biomass yield of rapeseed when As was applied; (3) When As application rate increased, As content significantly increased in different parts of rapeseed, and reached their highest level at<br />120 mg/kg As. Arsenic content from seed were all below 1 mg/kg AS. Addition of S significantly reduced As contents in root and grain of rapeseed.

Stabilization of the As-contaminated soil from the metal mining areas in Korea

The stabilization efficiencies of arsenic (As) in contaminated soil were evaluated using various additives such as limestone, steel mill slag, granular ferric hydroxide (GFH), and mine sludge collected from an acid mine drainage treatment system. The soil samples were collected from the Chungyang area, where abandoned Au-Ag mines are located. Toxicity characteristic leaching procedure, synthetic precipitation leaching procedure, sequential extraction analysis, aqua regia digestion, cation exchange capacity, loss on ignition, and particle size distribution were conducted to assess the physical and chemical characteristics of highly arsenic-contaminated soils. The total concentrations of arsenic in the Chungyang area soil ranged up to 145 mg/kg. After the stabilization tests, the removal percentages of dissolved As(III) and As(V) were found to differ from the additives employed. Approximately 80 and 40% of the As(V) and As(III), respectively, were removed with the use of steel mill slag. The addition of limestone had a lesser effect on the removal of arsenic from solution. However, more than 99% of arsenic was removed from solution within 24 h when using GFH and mine sludge, with similar results observed when the contaminated soils were stabilized using GFH and mine sludge. These results suggested that GFH and mine sludge may play a significant role on the arsenic stabilization. Moreover, this result showed that mine sludge can be used as a suitable additive for the stabilization of arsenic.

Arsenic-resistant bacteria solubilized arsenic in the growth media and increased growth of arsenic hyperaccumulator Pteris vittata L.

The role of arsenic-resistant bacteria (ARB) in arsenic solubilization from growth media and growth enhancement of arsenic-hyperaccumulator Pteris vittata L. was examined. Seven ARB (tolerant to 10mM arsenate) were isolated from the P. vittata rhizosphere and identified by 16S rRNA sequencing as Pseudomonas sp., Comamonas sp. and Stenotrophomonas sp. During 7-d hydroponic experiments, these bacteria effectively solubilized arsenic from the growth media spiked with insoluble FeAsO4 and AlAsO4 minerals (from <5μgL−1 to 5.04–7.37mgL−1 As) and enhanced plant arsenic uptake (from 18.1–21.9 to 35.3–236mgkg−1 As in the fronds). Production of (1) pyochelin-type siderophores by ARB (fluorescent under ultraviolet illumination and characterized with thin layer chromatography) and (2) root exudate (dissolved organic C) by P. vittata may be responsible for As solubilization. Increase in P. vittata root biomass from 1.5–2.2 to 3.4–4.2g/plant dw by ARB and by arsenic was associated with arsenic-induced plant P uptake. Arsenic resistant bacteria may have potential to enhance phytoremediation of arsenic-contaminated soils by P. vittata.

Effects of organic matter and ageing on the bioaccessibility of arsenic

Arsenic-contaminated soils may pose a risk to human health. Redevelopment of contaminated sites may involve amending soils with organic matter, which potentially increases arsenic bioaccessibility. The effects of ageing on arsenic-contaminated soils mixed with peat moss were evaluated in a simulated ageing period representing two years, during which arsenic bioaccessibility was periodically measured. Significant increases (p = 0.032) in bioaccessibility were observed for 15 of 31 samples tested, particularly in comparison with samples originally containing >30% bioaccessible arsenic in soils naturally rich in organic matter (>25%). Samples where percent arsenic bioaccessibility was unchanged with age were generally poor in organic matter (average 7.7%) and contained both arsenopyrite and pentavalent arsenic forms that remained unaffected by the organic matter amendments. Results suggest that the addition of organic matter may lead to increases in arsenic bioaccessibility, which warrants caution in the evaluation of risks associated with redevelopment of arsenic-contaminated land.

광양 초남 금 광산 비소오염 토양의 지화학적 및 광물학적 특성

Geochemical and mineralogical properties of a contamited soil should be taken into account to decide a remediation strategy for a given contaminant because development and optimization of soil remedial technologies are based on geochemical and mineralogical separation techniques. The objective of this study was to investigate the geochemical and mineralogical characteristics of arsenic-contaminated soils. The arsenic-contaminated soil samples were obtained from Chonam gold mine, Gwangyang, Chonnam, Particle size analysis, sequential extraction, and mineralogical analyses were used to characterize geochemical and mineralogical characteristics of the As-contaminated soils. Particle size analyses of the As-contaminated soils showed the soils contained 17-36% sand, 25-54% silt, 9-28% clay and the soil texture were sandy loam, loam, and silt loam. The soil pH ranged from 4.5 to 6.6. The amount of arsenic concentrations from the sequential soil leaching is mainly associated with iron oxides (1 to 75%) and residuals (12 to 91%). Major minerals of sand and silt fractions in the soils were feldspar, kaolinite, mica, and quartz and minor mineral of which is an iron oxide. Major minerals of clay fraction were composed of illite, kaolinite, quartz, and vermiculite. And minor minerals are iron oxide and rutile. The geochemical and mineralogical analyses indicated the arsenic is adsorbed or coprecipitated with iron oxides or phyllosilicate minerals. The results may provide understanding of geochemical and mineralogical characteristics for the site remediation of arsenic-contaminated soils.

Effects of soil types and forms of arsenical pesticide on rice growth and development

For decades, repeated and widespread use of arsenical pesticides has significantly contributed to arsenic contamination in soils. Residues from the overuse of these arsenicals may result in phytotoxicity to crops, which will depend on soil types, plant species and the toxicity of arsenical pesticides. A greenhouse column study was conducted to evaluate the effect of two pesticides, i.e. one organic (dimethylarsinic acid) and one inorganic (sodium arsenate), on the vegetative response of rice as a function of soil properties. Four soils with varying arsenic retention capabilities at two different pesticide amendment rates (675 and 1500 mg/kg) representing the worst case scenarios in superfund sites were used. Results showed that arsenic availability to rice was mainly influenced by soil physico- chemical properties. The soil with the lowest arsenic retention capacity had the highest arsenic concentration in the leachate as well as in the plant tissue. In contrast, for soils with higher arsenic retention capacity, higher concentrations of arsenic were found in the surface soil which resulted in the inhibition of plant growth. There was no significant difference between labile arsenic / plant-available arsenic irrespective of the form of arsenical pesticide used. Plant growth parameters such as biomass, shoot height, root length decreased with increased arsenic concentrations in all soils. A significant negative correlation (P<0.05) was observed between the phytoavailable arsenic and plant growth response. Interestingly, the form of arsenical pesticide used did not impact arsenic uptake or shoot growth but significantly impacted root growth.

Exploring the Potential of Bacteria-Assisted Phytoremediation of Arsenic-Contaminated Soils

Arsenic pollution is a serious global concern which affects all life forms. Being a toxic metalloid, the continued search for appropriate technologies for its remediation is needed. Phytoremediation, the use of green plants, is not only a low cost but also an environmentally friendly approach for metal uptake and stabilization. However, its application is limited by slow plant growth which is further aggravated by the phytotoxic effect of the pollutant. Attempts to address these constraints were done by exploiting plant-microbe interactions which offers more advantages for phytoremediation. Several bacterial mechanisms that can increase the efficiency of phytoremediation of As are nitrogen fixation, phosphate solubilization, siderophore production, ACC deaminase activity and growth regulator production. Many have been reported for other metals, but few for arsenic. This mini-review attempts to present what has been done so far in exploring plants and their rhizosphere microbiota and some genetic manipulations to increase the efficiency of arsenic soil phytoremediation.

Modeling Arsenic Sorption in the Subsurface with a Dual-Site Model

Arsenic is a well-known groundwater contaminant that causes toxicological and carcinogenic effects in humans. Predicting the transport of arsenic in the subsurface is often problematic because of its complex sorption characteristics. Numerous researchers have reported that arsenic sorption on soil material is initially fast and then subsequently slow. A dual-site numerical sorption model was previously developed to describe arsenic desorption from arsenic-contaminated soils in batch experiments in terms of two different release mechanisms. Experiments involving synthetic acid rain leaching of four arsenic-contaminated soil columns were performed to verify the dual-site numerical sorption model in the context of one-dimensional vertical transport. The fitted models successfully simulated the signature long tailings and the two-stage arsenic leaching patterns for all four soil columns. The dual-site sorption model was incorporated within the general solute transport simulation code Modular Three-Dimensional Multispecies (MT3DMS), version 5.10. The resulting version was named MT3DDS and is available for public access. This experimental study has shown that MT3DDS is capable of simulating phase redistribution during transport, and thus provides a new numerical tool for simulating arsenic transport in the subsurface.

Dietary Intake of Total and Inorganic Arsenic by Adults in Arsenic-Contaminated Dan Chang District, Thailand, Using Duplicate Food Approach

Dan Chang district, approximately 100 km west of Bangkok, was a site of tin mines operated almost 40 years ago. Mining operations caused arsenic contamination in soil, surface water, and groundwater within the district. The specific aim of this study was to estimate the dietary intakes of total and inorganic arsenic in 60 adults (30 males and 30 females) residing in Dan Chang district, using a duplicate food approach. The daily intake rates of inorganic arsenic ranged from 0.496 to 1.817 μg/kg BW for males and 0.342 to 1.778 μg/kg BW for females.

The Potential of Thelypteris palustris and Asparagus sprengeri in Phytoremediation of Arsenic Contamination

The potential of two plants, Thelypteris palustris (marsh fern) and Asparagus sprengeri (asparagus fern), for phytoremediation of arsenic contamination was evaluated. The plants were chosen for this study because of the discovery of the arsenic hyperaccumulating fern, Pteris vittata (Ma et al., 2001) and previous research indicating asparagus fern's ability to tolerate >1200 ppm soil arsenic. Objectives were (1) to assess if selected plants are arsenic hyperaccumulators; and (2) to assess changes in the species of arsenic upon accumulation in selected plants. Greenhouse hydroponic experiments arsenic treatment levels were established by adding potassium arsenate to solution. All plants were placed into the hydroponic experiments while still potted in their growth media. Marsh fern and Asparagus fern can both accumulate arsenic. Marsh fern bioaccumulation factors (>10) are in the range of known hyperaccumulator, Pteris vittata. Therefore, Thelypteris palustris is may be a good candidate for remediation of arsenic soil contamination levels of ≤500 μg/L arsenic. Total oxidation of As (III) to As (V) does not occur in asparagus fern. The asparagus fern is arsenic tolerant (bioaccumulation factors <10), but is not considered a good potential phytoremediation candidate.

Effect of arbuscular mycorrhizal fungi on growth of Gmelina arborea in arsenic-contaminated soil

Arsenic (As) in the soils of South-Eastern Bangladesh is not only a threat for the health of millions of people but also a problem for plant growth due to its higher concentration in soil. Gmelina arborea Linn. is a promising fast growing tree species in Bangladesh which has also a potential to be planted in arsenic contaminated areas. This study assessed the role of arbuscular mycorrhizal (AM) fungi on the growth of G. arborea in arsenic amended soils at nursery stage. Before sowing seeds, soils were treated with four different concentrations (10 mg·kg−1, 25 mg·kg−1, 50 mg·kg−1, and 100 mg·kg−1) of Arsenic. Growth parameters (length of shoot and root, collar diameter, fresh and dry weight of shoot and root) of the plant, and mycorrhizal root colonization and spore population in the rhizosphere soil of G. arborea were recorded. Mycorrhizal seedlings showed better growth than non-mycorrhizal seedlings. Mycorrhizal seedlings planted in soil with 10-mg·kg−1 arsenic showed best performance in terms of growth, biomass and mycorrhizal colonization, compared to other treatments with higher concentration of arsenic. With increasing arsenic concentration, growth of seedlings, mycorrhizal infection rate and spore population, all decreased significantly (p<0.05). The mycorrhizal seedlings had as much as 40% higher increment in total growth and 2.4 times higher increment in biomass compared to non-mycorrhizal seedlings. The study clearly indicated that mycorrhizal inoculation could reduce the harmful effects of arsenic on the initial growth of G. arborea Linn. in degraded soil at nursery stage.

Microbial Communities and Functional Genes Associated with Soil Arsenic Contamination and the Rhizosphere of the Arsenic-Hyperaccumulating Plant Pteris vittata L

To understand how microbial communities and functional genes respond to arsenic contamination in the rhizosphere of Pteris vittata, five soil samples with different arsenic contamination levels were collected from the rhizosphere of P. vittata and nonrhizosphere areas and investigated by Biolog, geochemical, and functional gene microarray (GeoChip 3.0) analyses. Biolog analysis revealed that the uncontaminated soil harbored the greatest diversity of sole-carbon utilization abilities and that arsenic contamination decreased the metabolic diversity, while rhizosphere soils had higher metabolic diversities than did the nonrhizosphere soils. GeoChip 3.0 analysis showed low proportions of overlapping genes across the five soil samples (16.52% to 45.75%). The uncontaminated soil had a higher heterogeneity and more unique genes (48.09%) than did the arsenic-contaminated soils. Arsenic resistance, sulfur reduction, phosphorus utilization, and denitrification genes were remarkably distinct between P. vittata rhizosphere and nonrhizosphere soils, which provides evidence for a strong linkage among the level of arsenic contamination, the rhizosphere, and the functional gene distribution. Canonical correspondence analysis (CCA) revealed that arsenic is the main driver in reducing the soil functional gene diversity; however, organic matter and phosphorus also have significant effects on the soil microbial community structure. The results implied that rhizobacteria play an important role during soil arsenic uptake and hyperaccumulation processes of P. vittata.

Hydrogen formation by an arsenate-reducing Pseudomonas putida, isolated from arsenic-contaminated groundwater in West Bengal, India

Anaerobic growth of a newly isolated Pseudomonas putida strain WB from an arsenic-contaminated soil in West Bengal, India on glucose, L: -lactate, and acetate required the presence of arsenate, which was reduced to arsenite. During aerobic growth in the presence of arsenite arsenate was formed. Anaerobic growth of P. putida WB on glucose was made possible presumably by the non-energy-conserving arsenate reductase ArsC with energy derived only from substrate level phosphorylation. Two moles of acetate were generated intermediarily and the reducing equivalents of glycolysis and pyruvate decarboxylation served for arsenate reduction or were released as H(2). Anaerobic growth on acetate and lactate was apparently made possible by arsenate reductase ArrA coupled to respiratory electron chain energy conservation. In the presence of arsenate, both substrates were totally oxidized to CO(2) and H(2) with part of the H(2) serving for respiratory arsenate reduction to deliver energy for growth. The growth yield for anaerobic glucose degradation to acetate was Y (Glucose) = 20 g/mol, leading to an energy coefficient of Y (ATP) = 10 g/mol adenosine-5'-triphosphate (ATP), if the Emden-Meyerhof-Parnas pathway with generation of 2 mol ATP/mol glucose was used. During growth on lactate and acetate no substrate chain phosphorylation was possible. The energy gain by reduction of arsenate was Y (Arsenate) = 6.9 g/mol, which would be little less than one ATP/mol of arsenate.