Atlantic Rainforest Area Research Articles

Dryadonycteris capixaba (CHIROPTERA: PHYLLOSTOMIDAE: GLOSSOPHAGINAE): FIRST RECORD FOR THE CERRADO AND UPDATED GEOGRAPHIC DISTRIBUTION MAP

We report a new record for the bat species Dryadonycteris capixaba (Chiroptera, Phyllostomidae),the first for the Cerrado biome, based on two specimens collected in palm swamps (“veredas”) in the municipality of Turmalina, state of Minas Gerais, southeastern Brazil. This record confirms that D. capixaba is not endemic to Atlantic rainforest areas, although it may be associated with mesic habitats.

<p><strong><em>Aphanomyces brasiliensis sp. nov.</em></strong><strong> (Verrucalvaceae, Saprolegniales): a new species from Brazilian Atlantic Rainforest areas</strong></p>

In this study, Aphanomyces brasiliensis is proposed as a new species. It was collected from soil and water samples of a trout farming system located in Atlantic Rainforest areas, São Paulo State, Brazil. This species is mainly characterized by the presence of commonly short and unbranched oogonial stalks, antheridia usually androgynous and monoclinous with clavate, bell-shaped or cylindrical antheridial cells. We also collected Aphanomyces helicoides, A. raphani and A. stellatus from samples of submerged leaves, surface sediment and water in freshwater bodies. All species were isolated growing on cellulosic and/or keratinous substrates used as bait. Phylogenetic analysis of the ITS (rDNA) region showed that the new species and the other Brazilian isolates clustered within the Aphanomyces clade.

Phenology of Amblyomma sculptum in a degraded area of Atlantic rainforest in north-eastern Brazil

Amblyomma sculptum is the principal vector of Rickettsia rickettsii, the main agent of spotted fever rickettsiosis in Brazil. Little information is available regarding the population dynamics of this tick in some regions, including north-eastern Brazil, where cases of spotted fever rickettsioses are increasingly reported. Herein, we studied the phenology of A. sculptum in a rural area in north-eastern Brazil. Ticks were collected from the environment, using dry ice-baited traps, monthly for two consecutive years. In total, 1500 ticks were collected: 94 females (6.3%), 74 males (4.9%), 468 nymphs (31.2%), and 864 larvae (57.6%). All nymphs and females were identified as A. sculptum. Males were tentatively identified as A. sculptum and larvae as Amblyomma spp. Ticks were more numerous during spring and summer, followed by autumn and winter. Peaks of larvae and nymphs were recorded during summer and spring, respectively, whereas adults were more frequently collected in spring. A total of 380 ticks were tested by PCR for the gltA gene of Rickettsia spp., but none of them were positive. While our results revealed a seasonal pattern for A. sculptum in north-eastern Brazil that is distinct from the seasonal pattern in south-eastern Brazil, we caution that the observed pattern could have been biased by the relatively low number of ticks collected. Finally, the absence of Rickettsia-infected ticks does not rule out the possibility that rickettsial organisms are circulating in the study area and further long-term studies are warranted.

Are Cecropia trees ecosystem engineers? The effect of decomposing Cecropia leaves on arthropod communities

AbstractEcosystem engineers structure species richness and the composition of biological communities. Although several studies have uncovered the importance of engineering environments, few studies have evaluated the effect of pioneering plants as ecosystem engineers, especially in tropical environments. When dead, Cecropia leaves become architecturally complex, acquiring a tridimensional shape due to desiccation, and may facilitate other organisms. Here, we evaluate the role of these dead leaves in structuring species richness, abundance, biomass, and composition of macroinvertebrate communities on leaf litter in six protected areas of Brazilian Atlantic Rainforest. Predators were larger, more abundant, and presented higher standing stock in the presence of dead Cecropia leaves compared to soil debris (i.e., common leaf litter); however, detritivores had the opposite patterns. This resulted in shifts in body size structure of the assemblage, thus causing inversion of biomass pyramids to top‐heavy in advanced stages of Cecropia leaves desiccation. Dead Cecropia leaves did not influence species richness and abundance of species, but they influenced the biomass of detritivores and predators in the communities. Our results demonstrated that pioneer trees can act as ecosystem engineers, by facilitating communities of invertebrate predators. In addition, our results suggest that the presence of Cecropia leaves can mediate trophic interactions and shape food web structure on the forest floor.Abstract in Portuguese is available with online material.

Chusquea parviligulata (Poaceae: Bambusoideae: Bambuseae): a new species of C. subg. Chusquea endemic to the Atlantic rainforest of Bahia, Brazil

Chusquea parviligulata, a new species of Neotropical woody bamboo (Bambuseae: Chusqueinae), is herein described and illustrated, and information on its morphology, conservation status and distribution are provided. It is classified within C. subg. Chusquea based on its relatively elongated internodes, differentiated culm leaves, a triangular and vertically oriented central bud, and infravaginal branching. Based on its occurrence in Brazil and the presence of a white waxy band below the nodes and infravaginal branching, C. parviligulata is further assigned to the C. meyeriana informal group. Within this group, C. parviligulata is most similar to C. clemirae and C. longispiculata, sharing the usually evident division of the subsidiary buds/branches into two groups as well as a triangular central bud and little to no fusion of the overlapping margin of the culm leaf sheaths. Chusquea parviligulata is characterized by having 20–42 subsidiary buds per node; foliage leaf blades adaxially scabrous near the margins and otherwise glabrous or sparsely setose and abaxially mostly glabrous, with a tuft of trichomes at the base; foliage leaf blade base attenuate and slightly asymmetric; and an inner ligule 0.05–0.2 mm long, among the shortest recorded for the genus. Chusquea parviligulata is found exclusively in the Serra da Pedra Lascada, a montane Atlantic Rainforest area in southern Bahia, and it has a restricted occurrence within the Serra. We also report a new locality for C. clemirae and confirm that is has infravaginal branching, not extravaginal branching as originally reported.

Bartonella henselae and Bartonella clarridgeiae infection, hematological changes and associated factors in domestic cats and dogs from an Atlantic rain forest area, Brazil

Cats are considered main reservoir of Bartonella henselae, which is transmitted to other cats especially through Ctenocephalides felis fleas, and to humans through scratching and biting. Serra da Tiririca State Park (PESET) is an Atlantic Forest area that shelters a wide variety of endemic fauna. Recently, the park has been suffering due to irregular housing construction and domestic animal population that interacts with humans and wildlife. Given that surveillance policies for animals are part of the global Strategic Framework for One Health, the aim of this study was to detect Bartonella spp. DNA in cats and dogs, evaluating laboratory changes and associated factors. Blood samples of 124 dogs and 89 cats were collected for hematology and serum chemistry analysis. DNA was extracted and tested by conventional polymerase chain reaction (PCR) targeting a fragment of the citrate synthase (gltA) gene of Bartonella spp. with specific primers. Positive samples were sequenced to identify species. Bartonella henselae and B. clarridgeiae were detected in 24.7% of cats, being, for our knowledge, the first report of B. clarridgeiae in cats from Rio de Janeiro, Brazil. None of the samples obtained from dogs tested positive in the PCR assays. No statistical significance was observed in physical and laboratory exams. We suggest that cats that inhabit PESET can be considered sources of Bartonella sp. for other cats and humans. We highlight that infected cats did not present clinical or laboratory alterations. We alert for the need of care measures, avoiding scratch and bite, particularly in immunocompromised people.

A high gene flow in populations of Amblyomma ovale ticks found in distinct fragments of Brazilian Atlantic rainforest.

The genetic structure of populations of the tick Amblyomma ovale from five distinct areas of the Brazilian Atlantic rainforest was evaluated via DNA sequencing and associated with the presence of domestic dogs acting as hosts at the edge of forest fragments. Ticks were collected from domestic dogs and from the environment between 2015 and 2017. Four collection areas were located in the surroundings and within the Serra do Mar State Park, São Paulo State (23°37'21"S, 45°24'43"W), where dogs were bimonthly monitored along 2 years using camera traps and GSM trackers. To determine the spatial limits of genetic structure, ticks collected upon dogs living near the Serra do Baturié, Ceará State (4°15'40"S, 38°55'54"W) were included as well. A total of 39 haplotypes of 16S rRNA and Cox 1 mitochondrial genes sequences were observed, with 27 of them coming from areas within the Serra do Mar State Park. No haplotype was shared between the Serra do Mar and the Serra do Baturié indicating isolation of tick populations at the scale of 2000km. Although three different haplotype lineages of A. ovale occurred within the Serra do Mar State Park, no genetic structure was found across the study sites within this park, suggesting high tick gene flow across a range of 45km. Monitoring data from domestic dogs and wild carnivores showed that these species share the same habitats at the forest edge, with dogs playing a likely limited role in tick dispersal. Our findings have important implications for understanding the genetic structure of wide spread A. ovale along Brazilian rainforest remnants, which can further be associated to tick-borne infectious agents, such as Rickettsia parkeri, and used for predicting future patterns of tick diversity in the Brazilian Atlantic rainforest.

Reproductive aspects of the semi-aquatic snake Erythrolamprus miliaris (Dipsadidae: Xenodontini) in the state of Rio de Janeiro, southeastern Brazil.

We analyzed some aspects of reproduction and sexual dimorphism of the semi-aquatic dipsadid snake Erythrolamprus miliaris in the state of Rio de Janeiro, southeastern Brazil. We detected sexual dimorphism in body size (snout-vent length), with females averaging larger than males, but no sexual dimorphism in the relative length of the tail. Oviductal eggs and secondary follicles were found in all seasons, suggesting that female reproductive cycles are continuous, in spite of the tropical seasonal climate in the region. Reproductive males were present throughout the year, suggesting a continuous cycle for males as well. Clutch size averaged 10.3 ± 4.8 (range 4-21) and there was a positive and significant relationship between clutch size and female size. Compared to conspecific populations previously studied in other Atlantic Rainforest areas, populations of E. miliaris from the state of Rio de Janeiro appear more similar overall in their reproductive traits to a more northern population from the state of Bahia than to populations from further south in the states of São Paulo and Paraná.

Daily activity patterns of medium and large neotropical mammals in an area of Atlantic rain forest at altitude

Camera traps were used to study the daily activity patterns of medium and large mammals (> 1 kg) in an area of Mixed Rain Forest (High Altitude Atlantic Forest) in the South of Brazil. Species that exhibited diurnal tendencies were Dasyprocta azarae, Eira barbara, Nasua nasua and Puma yagouaroundi. The nocturnal species observed were Dasypus novemcinctus, Tamandua tetradactyla and Procyon cancrivorus. Didelphis aurita, Leopardus pardalis and L. wiedii exhibited nocturnal tendencies. Cerdocyon thous tended to be more crepuscular than nocturnal. Puma concolor exhibited a tendency to nocturnal and crepuscular activity, but diurnal activity was also observed. Finally, the species Mazama gouazoubira and Leopardus tigrinus were defined as cathemeral. While many species exhibited a tendency for the majority of their activity to be concentrated at certain times, there was no time during which medium and large mammal activity entirely ceased, demonstrating a balanced daily distribution of activity in a Mixed Rain Forest. There were differences in activity patterns between different seasons, especially between summer and winter, with nocturnal species exhibiting a tendency to more intense activity during the first half of the night during the winter and diurnal species tending to be more active at the end of the day during the same season.

Diversity of basal fungal order Mucorales (Mucoromycota) in a remaining area of the Brazilian Atlantic Rainforest

Diversity of basal fungal order Mucorales (Mucoromycota) in a remaining area of the Brazilian Atlantic Rainforest

Communities of arbuscular mycorrhizal fungi in maize (Zea mays L.) crops along an edaphoclimatic gradient in Northeast Brazil

The objective of this study was to determine the species richness, diversity, and communities of arbuscular mycorrhizal fungi (AMF), based on the morphology of their spores, in maize plantations along an edaphoclimatic gradient going from a humid zone (original area of Atlantic rainforest), to a transition zone and a drier zone (original area of Caatinga), to increase the understanding of the ecology of AMF in tropical agroecosystems. We extracted glomerospores from soil samples from maize plantations in each mesoregion and analysed AMF propagules and community structure. A total of 57 AMF taxa were identified, of which two are new to science. The most probable number of AMF infective propagules did not differ among the three areas. A greater number of glomerospores was obtained from the transition site, whereas species richness for AMF differed between the high humidity and transition sites. The composition of AMF communities differed among sites, with edaphic attributes significantly associated with AMF community composition. The environmental conditions of each mesoregion contribute to the structural differences of AMF assemblages in soils cultivated by the same host plant (maize).

New records of the Tabebuia Alliance (Bignoniaceae) for the state of Paraiba, northeastern Brazil

This study presents 3 new records of the Tabebuia Alliance (Bignoniaceae) for the state of Paraiba, northeastern Brazil: Godmania dardanoi (J. C. Gomes) A. H. Gentry, Handroanthus umbellatus (Sond.) Mattos and Tabebuia stenocalyx Sprague & Stapf. These species were found in preserved areas of Atlantic rain forest, growing in swampy areas, on sandy and clay soils, and flowering between December and June. For each new record for the state of Paraiba, we present detailed descriptions, taxonomic notes, geographic distribution and photographs.

Molecular detection of the human pathogen Rickettsia parkeri strain Atlantic rainforest in Amblyomma ovale ticks in Argentina

Human rickettsioses caused by Rickettsia parkeri strain Atlantic rainforest in Brazil motivated the analysis of Amblyomma ovale ticks in Misiones province, a similar ecological region in northeastern Argentina. During 2010–2017, 393 A. ovale ticks were collected from domestic and wild animals and from vegetation, and 177 were pooled for rickettsial detection by PCR targeting the gltA, ompA and ompB genes. A sample consisting of a pool of two A. ovale adults collected on Nasua nasua was positive for Rickettsia parkeri strain Atlantic rainforest. Since the Atlantic rainforest areas in Brazil share environmental characteristics with Misiones province, the transmission cycle of R. parkeri strain Atlantic rainforest observed in Brazil should be extrapolated to Argentina, where awareness on the possibility of occurrence of rickettsiosis cases caused by this strain should be raised.

Long-term stability of the hawkmoth fauna (Lepidoptera, Sphingidae) in a protected area of Brazilian Atlantic Rain Forest

Hawkmoths are an important component of tropical ecosystems, with significant roles as herbivores and pollinators. These moths can be used as indicators in biodiversity assessments because they can be easily sampled and identified. However, hawkmoths have seldom been surveyed over the long term for this purpose, especially in the Neotropical region. Considering that long-term datasets are of indisputable importance for understanding and monitoring temporal changes in biodiversity, this study assessed long-term changes in the hawkmoth fauna in a protected Atlantic Rain Forest area over a period of 64 years. We used historical and recent empirical datasets to ask whether faunal-diversity patterns and species composition have changed over time. We used individual- and sample-based rarefaction and extrapolation curves based on Hill number (diversity order of q = 0) to compare species richness, and the probability version of the abundance-based Chao-Jaccard index to assess beta diversity over time. To assess changes in faunal composition, we conducted a nonmetric multidimensional scaling analysis and performed an analysis of similarities to test whether the community composition has changed. Our results clearly showed long-term stability of the hawkmoth community over the 64 years, despite the growing human-induced landscape changes that occurred in the region surrounding the study area during the last 6 decades. This study emphasizes the importance of large remnants of Atlantic Forest for long-term maintenance of both functional diversity and ecosystem functioning.

Characterisation of the diversity and physiology of cellobiose-fermenting yeasts isolated from rotting wood in Brazilian ecosystems

We investigated the yeast species associated with rotting wood samples obtained from Brazilian ecosystems, with a special focus on cellobiose-fermenting species. About 647 yeast strains were isolated from rotting wood samples collected from the areas of Atlantic rainforest, Cerrado, and Amazonian forest. Eighty-six known species and 47 novel species of yeasts were isolated. Candida boidinii, Cyberlindnera subsufficiens, Meyerozyma guilliermondii, Schwanniomyces polymorphus, Candida natalensis, and Debaryomyces hansenii were the most frequently isolated species. Among the cellobiose-fermenting yeasts, 14 known and three novel yeast species were identified. Scheffersomyces queiroziae, Sc. amazonensis, Yamadazyma sp.1, Hanseniaspora opuntiae, C. jaroonii, and Candida tammaniensis were the main ethanol-producing yeasts. These species also produced an intracellular β-glucosidase responsible for cellobiose hydrolysis. In fermentation assays using a culture medium containing 50 g L−1 cellobiose, ethanol production was observed in all cases; Sc. queiroziae and Sc. amazonensis showed the highest yield, efficiency, and productivity. Candida jaroonii and Yamadazyma sp.1 strains also showed high efficiency in cellobiose fermentation, while C. tammaniensis and H. opuntiae strains produced low amounts of ethanol. This study shows the potential of rotting wood samples from Brazilian ecosystems as a source of yeasts, including new species as well as those with promising biotechnological properties.

Fruit production along roads and footpaths in an Atlantic rain forest area

ABSTRACTBackground: Pathways (footpaths and roads) in forests are associated with edge effects, affecting forest structure and composition and associated wildlife. However, little is known about how edge effects along pathways may impact the dynamics of fruit production and their availability for frugivores.Aim: We related pathway width as a proxy for edge effects to fruit production. Our underlying hypothesis was that pathway width would be positively related to fruit production.Methods: We observed fruit production along three pathways of different widths – 2, 10 and 20 m wide – and in a control area of undisturbed forest in an Atlantic rain forest stand monthly over a 2-year period.Results: The number of species and individuals-bearing fruit was higher along the wider pathways than along the narrowest pathway and in the control area. The amount of zoochorous fruits was higher in the control area than along pathways, and the widest pathway had higher non-zoochorous fruits production. Fruiting peaks occurred along pathways, while fruiting in the control area was aseasonal.Conclusions: Pathway width is related to fruit type and its quantity and temporal availability. These effects extend towards the forest interior beyond 35 m. The presence of paths affects food resources for frugivores and thus can contribute to reconfiguring the spatio-temporal distribution of the fauna.

Identification key for fishes from coastal streams of the Atlantic forest of southeastern Brazil

Abstract In recent decades, current knowledge about fish from Neotropical streams has greatly increased, but is still deficient. Here we present an identification key for fishes from coastal freshwater streams from a large conservation area of Atlantic rainforest of southeastern Brazil, including 39 species. Considering that most of these species (61.2%) are endemic to the coastal streams, this identification key will be useful not only for the species recognition of the sampled area, but also for the surrounding coastal region.

Spathaspora piracicabensis f. a., sp. nov., a D-xylose-fermenting yeast species isolated from rotting wood in Brazil.

Two strains of a novel yeast species were isolated from rotting wood of an ornamental tree (purple quaresmeira, Tibouchina granulosa, Melastomataceae) in an Atlantic Rainforest area in Brazil. Analysis of the sequences of the internal transcribed spacer (ITS-5.8S) region and the D1/D2 domains of the large subunit rRNA gene showed that this species belongs to the Spathaspora clade, and is phylogenetically related to Spathaspora brasiliensis, Candida materiae and Sp. girioi. The novel species ferments D-xylose, producing ethanol, with amounts between 3.37 and 3.48gL-1 ethanol from 2% D-xylose. Ascospores were not observed from this new species. The name Spathaspora piracicabensis f. a., sp. nov. is proposed to accommodate these isolates. The type strain is UFMG-CM-Y5867T (=CBS 15054T=ESALQ-I54T). The MycoBank number is MB 822,320.

English

Endophytes are usually protected from soil environment competitiveness and stress. However, the presence of heavy metals can negatively affect the structure and diversity of endophyte communities. The aim of the present study was evaluate the diversity of endophytic bacteria from ipe mirim (Tecoma stans Bignoniaceae) grown in an area of Atlantic rainforest contaminated with metals and evaluate the ability of these bacteria to promote plant growth and seed germination. Results show that endophytic bacterial density in plants was stable among sites with different level of metals; however, bacterial richness was lower in plants from sites with low level of metals. At least 28 genera were isolated, where Methylobacterium (21.32%), Bacillus (19.12%), Pseudomonas (11.03%) and Curtobacterium (7.35%) the dominant groups. Isolates were selected from Rhizobiales order and the capability of this dominant group in plant growth promotion was evaluated. Results showed that Methylobacterium spp. and Rhizobium sp. increased germination and improved seedling growth of tomato Santa Cruz Kada Gigante. Therefore, results show that the endophyte cultivable community is not influenced by the presence of low metal concentration, and plant growth promoter bacteria that can be used on tomato seedlings production were successfully selected and on future phytoremediation studies. Key words: Methylobacterium spp., Rhizobium sp., Tecoma stans, microbial diversity, metals, plant growth promoting bacteria (PGPB), tomato, growth promotion.

The majestic canopy-emergent genus Dinizia (Leguminosae: Caesalpinioideae), including a new species endemic to the Brazilian state of Esp\xedrito Santo

SummarySince its description, almost 100 years ago, the genus Dinizia has been treated as monospecific, comprising the single canopy-emergent species Dinizia excelsa Ducke which grows in non-flooded Amazonian forests of Guyana, Suriname and seven states of northern and central-western Brazil. Dinizia jueirana-facao G. P. Lewis & G. S. Siqueira, which grows in a restricted area of semi-deciduous Atlantic rain forest in Espírito Santo state, Brazil, is described as a new species in the genus. The new species is also a canopy-emergent of impressive stature. We provide descriptions for both species, a key to species identification, a distribution map and the new species is illustrated. Fossil leaves, inflorescences and fruit provide evidence for a Dinizia-like ancestor occurring in south-eastern North America during the Eocene. In contrast to D. excelsa where pollen is dispersed in tetrads, the pollen of D. jueirana-facao is shed in monads. D. jueirana-facao is considered critically endangered following IUCN conservation criteria, whereas D. excelsa is assessed to be of least concern. A lectotype is designated for D. excelsa.