The genus Smilax is adapted for growth in karst areas of south China, likely because of the karst habitat heterogeneity of the area and climate factors. However, the phylogenetic relationships among different species in this genus and impact of environmental changes on its geographic distribution patterns remain unclear. Therefore, we assembled the 11 chloroplast genomes of the genus Smilax and reconstructed its phylogeny using the maximum‐likelihood method to confirm the phylogenetic relationships of Smilax astrosperma among 28 other Smilax genus species. In addition, a maximum entropy (MaxEnt) model was applied to evaluate and predict the potential distribution of S. astrosperma using bioclimatic variables, soil environment, elevation, slope degree and aspect, and human footprints under present and predicted future climate scenarios. The results show that S. astrosperma has a close relationship with S. glabra in the genus Smilax. The average temperature of the coldest quarter is a crucial factor influencing the distribution of S. astrosperma in karst areas. The potential distribution range of S. astrosperma increases and decreases under the SSP1‐2.6 and SSP5‐8.5 scenarios, respectively. These findings highlight that S. astrosperma and other species of the karst areas of south China need special attention under climate warming since both warming itself and extreme weather events threaten their survival.
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