The first systematic geoarchaeological study of a rockshelter in Kansas yielded information about rockshelter formation, Holocene paleoenvironments, archaeological site formation processes, and prehistoric human habitation and site use. The rockshelter was carved by groundwater sapping; colluvium, alluvium, and roof‐fall debris subsequently accumulated on its floor. An assemblage of Late Archaic (∼2000–4000 14C years before present [yr B.P.]) cultural deposits (lithic material, bone, and charcoal) is preserved in a 2‐m thick package of colluvium and alluvium in front of the shelter. Chipped stone analysis indicates that Late Archaic occupants of the shelter were using mostly local materials and resharpening their stone tools at the shelter. Stable carbon isotope and phytolith analyses indicate that a mixed C3 and C4 plant community existed in the study area and that it changed in composition through the late Holocene. Based on the phytolith assemblage from an unlined fire pit at the front of the shelter, Late Archaic people used local hackberry trees for fuel and/or food.