We study torsion-free, rank 2 Higgs sheaves on genus one fibered surfaces, (semi)stable with respect to suitable polarizations in the sense of Friedman and O’Grady. We prove that slope-semistability of a Higgs sheaf on the surface implies semistability on the generic fiber. In the case of Higgs sheaves of odd fiber degree on elliptic surfaces in characteristic \(\ne 2\), we prove that any moduli space of Higgs sheaves with fixed numerical invariants splits canonically as the product of the moduli space of ordinary sheaves (with the same invariants), and the space of global regular 1-forms on the surface. For elliptic surfaces with section in characteristic zero, and in the case arbitrary fiber degree, we prove that if a Higgs sheaf has reduced Friedman spectral curve, or is regular on a general fiber with non-reduced spectral cover, then its Higgs field takes values in the saturation of the pull-back of the canonical bundle of the base curve in the cotangent bundle of the surface.