Antagonistic Ability Research Articles

Integrated control of Fusarium wilt in banana by Bacillus velezensis EB1 and potassium sorbate

Fusarium wilt of banana, caused by Fusarium oxysporum f. sp. cubense tropical race 4 (Foc TR4), is a widely distributed soilborne disease that poses a serious threat to banana production. Many control measures have been implemented but have not been effective. Here, we evaluated a combined strategy for Fusarium wilt control that involves a biological agent (Bacillus velezensis strain EB1) and a bioactive compound (potassium sorbate). Our results showed that potassium sorbate inhibited Foc TR4 in a dose-dependent manner. Potassium sorbate did not limit the growth of EB1 in vitro; instead, it promoted the growth and antagonistic ability of EB1 by upregulating the expression of antagonism-related genes. In greenhouse experiments, the combined application of EB1 and potassium sorbate significantly reduced the disease index of Fusarium wilt by suppressing fungal growth in the roots and promoting plant growth. Overall, our results demonstrated that potassium sorbate and B. velezensis EB1 can be used together for the sustainable management of banana Fusarium wilt.

Carboxymethyl cellulose-induced Cryptococcus laurentii improves disease resistance and regulates phenylpropane and reactive oxygen metabolism in grapefruit

Green mould disease poses a significant threat to the citrus industry. Cryptococcus laurentii can stimulate the fruit defence system, whereas the use of antagonistic yeast alone demonstrates limited efficacy. This study investigated the molecular mechanisms of C. laurentii cultured with carboxymethyl cellulose (CMCC. laurentii), and evaluated the effects of CMCC. laurentii on phenylpropane and reactive oxygen metabolism in grapefruit fruit. Transcriptome analysis revealed that the upregulation of gene expression associated with yeast growth and antagonistic ability occurred in CMCC. laurentii after 72 h cultivation. Meanwhile, CMCC. laurentii reduced lesion diameter and disease incidence in fruit. This treatment promoted phenylpropane metabolism by activating PAL, C4H, 4CL, POD, and PPO and increasing the secondary metabolites. CMCC. laurentii also activated the AsA-GSH cycle, enhanced the activities of SOD and CAT, and reduced the accumulation of H2O2 and O2•-. The results suggested that CMCC. laurentii maintained high postharvest fruit quality in grapefruit fruit by elevating the phenylpropane and reactive oxygen metabolism.

Pathogenicity of Bacillus subtilis Against Symbiotic Fungus of Euwallacea fornicates (Coleoptera: Scolytidae) From South India.

In India, the shot-hole borer, Euwallacea fornicates, commonly known as the tea borer, infests the galleries of tea plant twigs under natural conditions and is a major pest of tea. The current investigation focuses on the antagonistic ability of Bacillus subtilis to directly inhibit the growth of plant pathogens in two different climatic regions of tea-growing area. The evaluation reveals that (a) B. subtilis can directly suppress the growth of plant pathogens (b) in the in vitro evaluation; the B. subtilis suppressed the growth of the Fusarium ambrossium, which is the nourishment for the ambrosia beetle, (c) it also revealed that the antagonistic microbes and the entomopathogens are able to control the pest population of the shot hole borer of tea. The impact of B. subtilis on mycelial growth, sporulation, and spore germination of F. ambrosium in agar medium was observed. In the field condition on the post-treatment assessments shows an average decline of 40% in both foliar and soil drenching. Hence, we recommend the antagonistic bacterium B. subtilis for including as an IPM for the management of shot hole borer in tea.

Biological Control of Sclerotinia Rot Caused by Sclerotinia sclerotiorum in Lettuce Using Bacillus amyloliquefaciens HY

To test the antagonistic ability of <i>Bacillus amyloliquefaciens</i> HY against lettuce sclerotinia rot caused by <i>Sclerotinia sclerotiorum</i>, an <i>in vitro</i> test, greenhouse test and growth chamber test were conducted. As a result of <i>in vitro</i> dual culture test for sclerotia of <i>B. amyloliquefaciens</i> HY, the mycelial growth inhibition rate was 70.7%. Mycelial tip was swollen, black, and had an irregular and deformed shape. In I-plate test, the antagonistic volatile compounds produced by <i>B. amyloliquefaciens</i> HY, the mycelial growth inhibition rate was 57.7% and the sclerotia germination inhibition rate was 46.7%. In addition, <i>B. amyloliquefaciens</i> HY had sideropore production capacity, phosphate solubillibty, and protease production capability, but <i>B. amyloliquefaciens</i> HY did not produce chitinase. In growth chamber test, the lettuce survival rate was 0% in the control group treated with only the pathogen, and 80% in the treatment group treated with of <i>S. sclerotiorum</i> and <i>B. amyloliquefaciens</i> HY by diluting 10 times of the lettuce survival rate. In addition, the lettuce survival rate of 80% was shown in the treatment group treated with the culture medium of <i>B. amyloliquefaciens</i> HY 50 times 1 week later after inoculation with <i>S. sclerotiorum</i>.

Sterol regulatory element-binding proteins mediate intrinsic fungicide tolerance and antagonism in the fungal biocontrol agent Clonostachys rosea IK726

Sterol regulatory element-binding proteins (SREBPs) are transcription factors governing various biological processes in fungi, including virulence and fungicide tolerance, by regulating ergosterol biosynthesis and homeostasis. While studied in model fungal species, their role in fungal species used for biocontrol remains elusive. This study delves into the biological and regulatory function of SREBPs in the fungal biocontrol agent (BCA) Clonostachys rosea IK726, with a specific focus on fungicide tolerance and antagonism. Clonostachys rosea genome contains two SREBP coding genes (sre1 and sre2) with distinct characteristics. Deletion of sre1 resulted in mutant strains with pleiotropic phenotypes, including reduced C. rosea growth on medium supplemented with prothioconazole and boscalid fungicides, hypoxia mimicking agent CoCl2 and cell wall stressor SDS, and altered antagonistic abilities against Botrytis cinerea and Rhizoctonia solani. However, Δsre2 strains showed no significant effect. Consistent with the gene deletion results, overexpression of sre1 in Saccharomyces cerevisiae enhanced tolerance to prothioconazole. The functional differentiation between SRE1 and SRE2 was elucidated by the yeast-two-hybridization assay, which showed an interaction between SREBP cleavage-activating protein (SCAP) and SRE1 but not between SRE2 and SCAP. Transcriptome analysis of the Δsre1 strain unveiled SRE1-mediated expression regulation of genes involved in lipid metabolism, respiration, and xenobiotic tolerance. Notably, genes coding for antimicrobial compounds chitinases and polyketide synthases were downregulated, aligning with the altered antagonism phenotype. This study uncovers the role of SREBPs in fungal BCAs, providing insights for C. rosea IK726 application into integrated pest management strategies.

Complete genome sequence of Pseudomonas aeruginosa Y010, a taro rhizosphere strain producing potent antimicrobial agents.

Pseudomonas aeruginosa Y010, isolated from the taro rhizosphere, exhibits great antagonistic abilities against Dickeya strains that cause soft-rot and blackleg diseases of plants by producing potent antimicrobial agents. The complete genome of Y010 was sequenced and annotated, which is 6,415,628 bp in length with 66.39% GC content.

Neg1 overexpression in Trichoderma harzianum T4 enhanced its ability to produce spores and antagonistic activity against phytopathogenic fungi.

Trichoderma harzianum T4 is a soil fungus that plays an important role in the biological control of plant diseases. The aim of this study was to functionally characterize the β-1,6-glucanase gene Neg1 in T. harzianum T4 and to investigate the effect of its overexpression on biocontrol traits, especially antagonism against pathogenic fungi. We found that overexpression of Neg1 did not affect growth of T. harzianum but enhanced sporulation of T. harzianum T4 cultures. Generally, spores are closely related to the defense ability of defense fungi and can assist their proliferation and improve their colonization ability. Secondly, overexpression of Neg1 also increased the secretion level of various hydrolytic enzymes and enhanced the antagonistic ability against phytopathogenic fungi of Fusarium spp. The results suggest that Neg1 is a key gene for improving the biocontrol effect of T. harzianum T4, which contributes to a better understanding of the mechanism of action of T. harzianum T4 as a fungal biocontrol agent.

TagP, a PAAR-domain containing protein, plays roles in the fitness and virulence of Acinetobacter baumannii.

Type VI secretion system (T6SS) is widely present in Gram-negative bacteria and directly mediates antagonistic prokaryote interactions. PAAR (proline-alanine-alanine-arginine repeats) proteins have been proven essential for T6SS-mediated secretion and target cell killing. Although PAAR proteins are commonly found in A. baumannii, their biological functions are not fully disclosed yet. In this study, we investigated the functions of a PAAR protein termed TagP (T6SS-associated-gene PAAR), encoded by the gene ACX60_RS09070 outside the core T6SS locus of A. baumannii strain ATCC 17978. In this study, tagP null and complement A. baumannii ATCC 17978 strains were constructed. The influence of TagP on T6SS function was investigated through Hcp detection and bacterial competition assay; the influence on environmental fitness was studied through in vitro growth, biofilm formation assay, surface motility assay, survivability in various simulated environmental conditions; the influence on pathogenicity was explored through cell adhesion and invasion assays, intramacrophage survival assay, serum survival assay, and G. melonella Killing assays. Quantitative transcriptomic and proteomic analyses were utilized to observe the global impact of TagP on bacterial status. Compared with the wildtype strain, the tagP null mutant was impaired in several tested phenotypes such as surface motility, biofilm formation, tolerance to adverse environments, adherence to eukaryotic cells, endurance to serum complement killing, and virulence to Galleria melonella. Notably, although RNA-Seq and proteomics analysis revealed that many genes were significantly down-regulated in the tagP null mutant compared to the wildtype strain, there is no significant difference in their antagonistic abilities. We also found that Histone-like nucleoid structuring protein (H-NS) was significantly upregulated in the tagP null mutant at both mRNA and protein levels. This study enriches our understanding of the biofunction of PAAR proteins in A. baumannii. The results indicates that TagP involved in a unique modulation of fitness and virulence control in A. baumannii, it is more than a classic PAAR protein involved in T6SS, while how TagP play roles in the fitness and virulence of A. baumannii needs further investigation to clarify.

Uncovering the Antifungal Potential of Plant-Associated Cultivable Bacteria from the Aral Sea Region against Phytopathogenic Fungi.

Two freshwater rivers, the Amu Darya and Syr Darya, flow into the Aral Sea, but they began to diminish in the early 1960s, and by the 1980s, the lake had nearly ceased to exist due to excessive water consumption for agriculture and the unsustainable management of water resources from rivers, which transformed the Aral Sea into a hypersaline lake. Despite this, the flora and fauna of the region began to evolve in the high-salinity seabed soil, which has received little attention in studies. In this study, we isolated approximately 1400 bacterial strains from the rhizosphere and phyllosphere of plant species of distinct families. Bacterial isolates were examined for antifungal activities against a range of pathogenic fungi such as Rhizoctonia gossypii, Trichothecium ovalisporum, Fusarium annulatum, F. oxysporum, F. culmorum, F. brachygibbosum, F. tricinctum, F. verticillioides, Alternaria alternata, A. terreus, Aspergillus niger, and As. flavus. Eighty-eight bacterial isolates exhibited varying antagonistic ability against pathogenic fungi. Furthermore, DNA barcoding of isolates using the 16S rRNA gene indicated that most antagonistic bacteria belonged to the Bacillus and Pseudomonas genera. The study also explored the activity of hydrolytic and cell-wall-degrading enzymes produced by antagonistic bacteria. The findings revealed that antagonistic bacteria can be utilized to widely protect seabed plants and plants growing in saline areas against pathogenic fungi, as well as agricultural crops.

Identification and Evaluation of Antagonistic Potential of Different fluorescent pseudomonads in Northern Plains of West Bengal

To achieve future food security, reliable crop protection will be critically important. Development of biological control for soil borne disease is accepted as a safe, durable and ecofriendly alternative for chemical management strategy. Pseudomonads possess many traits like production antibiotics, lytic enzymes, siderophores, hydrogen cyanide (HCN) that make them well suited as biocontrol and growth-promoting agents. An attempt was taken to isolate and identify different fluorescent Pseudomonads and to evaluate their antagonistic ability. Twelve fluorescent Pseudomonads isolates were collected from different crop rhizosphere from different locations of northern parts of West Bengal. Isolates characterized morphologically and biochemically. All the isolates were gram negative rods with smooth and glossy colony on kings B and nutrient agar medium with convex elevation but variation was found in respect to pigment production. A huge variation was found in respect to biochemical characterization. From the result of biochemical analysis, the isolated sp. can be identified as Pseudomonas fluorescens or Pseudomonas putida or Pseudomonas aeruginosa. Some of the isolate produce green, some isolates produce yellowish green and rest of them produce red/pink pigments. Isolates showed a huge variation in respect to pathogenicity against soil borne pathogen Slerotium rolfsii. Percent inhibition varied from 31 to 74 %. Isolate 3 and 8 can be efficient biocontrol agent as highest growth inhibition of the pathogen Sclerotium rolfsii was obtained by the isolate 8 (74.37%) followed by isolate 3 (63.15%). In respect to growth parameter isolate 8, 9 and 10 were found better among the isolates where as in respect to disease reduction isolate 3, 8, 9 and 11 were promising under in vivo study.

Potensi Cendawan Antagonis Trichoderma Viride Isolat Bogor sebagai Agensi Pengendalian Hayati Penyakit Antraknosa Tanaman Cabai Merah

Anthracnose disease caused by Colletottrichum capsici on chili plants that can damage yields by up to 80%. Control with fungicides has not been able to provide maximum results, because the fungus can move due to water splashes, especially in the rainy season. The use of antagonistic fungi against Colletotrichum capsici. has been widely published but is still limited to laboratory and greenhouse scales. This study aims to analyze the potential of Bogor isolate Trichoderma viride antagonist fungus against the fungus C. capsici through in-vitro study in the laboratory, screen houses, and field conditions. The experiment was structured using Complete Randomized Design (CRD) with parameters that measured respectively the antagonistic ability, and the percentage of attack by C. capsici and the severity of anthracnose disease on chili plants were both tested in screen house condition. Bogor Isolate T. viride has potential as a biological control agent for chili plants. This is proven by the ability to suppress the growth of C. capsici by 71% in vitro. The use of the fungus T. viride with a concentration of 7x106 conidia/ml (full strength) can suppress the development of anthracnose by 59 to 87% under screen house conditions. In other words, the pathogenicity of capsici in red chili plants shows a severity level of 13 to 41%.

Role of Hydrogen Peroxide (H2O2) and Trichoderma koningii in Reducing Root Rot Disease of Tomato Causing by Fusarium solani

Two isolates of the pathogenic fungus Fusarium solani the causative of tomato root rot disease named Fs1 and Fs2 were isolated from tomato plants infected with root rot disease. Results showed that both examined isolates had significant effects on the percentage of seed germination of tomato and damping-off disease. Thus, isolate Fs1 was more effective than isolate Fs2, as it recorded a percentage of germination and damping-off 56.6 and 71.6% respectively, compared to the control treatment, which recorded 100 and 0% respectively. It was found that the use of hydrogen peroxide (H2O2) at concentrations of 50, 100 and 200 ppm had a significant effect on the fungal radial growth, dry weight (DW) and sporulation of F. solani. Antifungal activity of H2O2 appeared even at the lowest concentration (50 ppm), which inhibited radial growth to 49.33%, and decreased the dry weight to 498 mg, and the sporulation to 3.75×106 spores. Additionally, the results indicated significant inhibitory effects of hydrogen peroxide (H2O2) and the bioagent Trichoderma koningii on F. solani growth. It was noticed that H2O2 has compatible effects with T. koningii, where the antagonistic ability of T. koningii against F. solani increased when the concentration of H2O2 had increased. The results revealed that the treatment F. solani + H2O2 (200 ppm) + T. koningii significantly reduced the percentage of damping-off and plant survival to 9.40 and 5.39% respectively, in comparison with the control treatment and F. solani alone treatment, which reached 20.22, 14.48, 34.32 and 67.41% respectively.

Antagonist Test of Trichoderma sp and Gliocladium sp Againts Fungal Pathogens That Cause Diseases on Tomato Plant

Tomatoes (Solanum lycopersicum) are one of the widely cultivated crops consumed by people worldwide, including Indonesia. Tomato farming often faces various challenges that result in reduced tomato productivity. One of the challenges is the presence of diseases that affect tomatoes, leading to crop failure for farmers. Some important diseases that commonly affect tomato plants include Fusarium wilt and anthracnose. Most farmer use chemical fungicides to control the diseases. These methods have greater negative impacts on both plants and the surrounding environment. One alternative control technique that can be used is the use of biological agents with antagonistic properties, such as Trichoderma sp. and Gliocladium sp. This research aims to assess antagonistic abilities of endophytic fungi Trichoderma sp. and Gliocladium sp. againts the pathogens responsible for suppresing the growth of these disease-causing phatogens in tomato plants. in the Laboratory of Plant Pest and Disease Science, OECF Building, Faculty of Agriculture, Universitas Mulawarman. The experiment was designed using a completely randomized single-factor design with four treatments and five replications. The data obtained were analyzed using Analysis of Variance and the least significant difference test at a 5% significance level. The research results indicate that the antagonistic tests of Trichoderma sp. and Gliocladium sp. in vitro significantly differ againts the pathogenic fungi Fusarium sp. and Colletotrichum sp. Furthermore, it was found that the antagonistic fungus Gliocladium sp. is the best fungus capable of suppressing the growth of important pathogenic fungi in tomato plants.Keyword: Gliocladium sp., Trichoderma sp., Fusarium sp., Colletotrichum sp. and Tomato (Solanum lycopersicum)

Screening and effects of intestinal probiotics on growth performance, gut health, immunity, and disease resistance of Nile tilapia (Oreochromis niloticus) against Streptococcus agalactiae

In the present study, 59 autochthonous bacteria were isolated from the intestine of tilapia. Following enzyme producing activity, antagonistic ability, hemolytic activity, drug sensitivity assessments, and in vivo safety evaluation, 7 potential probiotic strains were screened out: Bacillus tequilensis BT0825-2 (BT), Bacillus aryabhattai BA0829-3 (BA1), Bacillus megaterium BM0505-6 (BM), Bacillus velezensis BV0505-11 (BV), Bacillus licheniformis BL0505-18 (BL), B. aryabhattai BA0505-19 (BA2), and Lactococcus lactis LL0306-15 (LL). Subsequently, tilapia were fed basal diets (CT) and basal diets supplemented with 108 CFU/g of BT, BA1, BM, BV, BL, BA2 and LL, respectively. After 56 days of continuous feeding, the growth parameters (weight gain, final weight, and specific growth rate) showed significant improvement (p < 0.05) in both BM and BA2 groups. The total cholesterol and triglycerides of serum were significantly decreased in BV and LL groups (p < 0.05). The superoxide dismutase, glutathione reductase, and lysozyme of BV, BA2 and LL groups were increased, and the malondialdehyde of BV group was significantly decreased. The villous height and amylase of midgut were increased in BV, BA2 and LL groups. In addition, the expression levels of ZO-1 and occludin genes in the midgut of tilapia were enhanced in BM, BV, BA2 and LL groups. The supplementation of probiotics reduced the abundance of Cyanobacteria and increased the abundance of Actinobacteria at the phylum level. At the genus level, the addition of probiotics increased the abundance of Romboutsia. Furthermore, improvement in the expression of immune-related genes were observed, including interleukin 1β, interleukin 10, tumor necrosis factor alpha, and transforming growth factor beta (p < 0.05). After challenging with S. agalactiae, the survival rates of BV, BA2 and LL groups were significantly higher than CT group (p < 0.05). Above results indicated that BM, BA2, BV and LL improved growth performance, gut health or immunity of tilapia, which can be applied in tilapia aquaculture.

Antagonistic activity of Trichoderma sp. against pathogens in the leaves of Allium ascalonicum L.

Pathogenic fungi pose constraints and reduce shallot production. Trichoderma sp. is an antagonistic fungus capable of controlling pathogen growth in shallots. The aim of this study was to determine the characteristics of Trichoderma sp. and pathogens in shallots and to assess the antagonistic ability of Trichoderma sp. against shallot pathogens (Allium ascalonicum L.). Trichoderma sp. and shallot pathogens were isolated using a serial dilution agar plate method using potato dextrose agar medium with 7-day incubation. The antagonistic activity of Trichoderma sp. against shallot pathogens was evaluated based on the dual culture method. In this study, we successfully isolated Trichoderma harzianum from the shallot leaf and its root systems. Moreover, four morphologically distinctive pathogens from shallot roots and leaves were successfully isolated (l Aspergillus sp., Colletotrichum sp., Phytium sp. and Penicillium sp. T. harzianum was found to have the ability to inhibit 23.45% growth of Aspergillus sp, 26.19% growth of Colletotrichum sp., 75.40% growth of Phytium sp., and 40.38% growth of Penicillium sp. In conclusion, the isolated T. harzianum had a strong antagonistic activity against some pathogens in the shallot, but the activity was weak against some others.

Red and far-red light improve the antagonistic ability of Trichoderma guizhouense against phytopathogenic fungi by promoting phytochrome-dependent aerial hyphal growth.

Light as a source of information regulates morphological and physiological processes of fungi, including development, primary and secondary metabolism, or the circadian rhythm. Light signaling in fungi depends on photoreceptors and downstream components that amplify the signal to govern the expression of an array of genes. Here, we investigated the effects of red and far-red light in the mycoparasite Trichoderma guizhouense on its mycoparasitic potential. We show that the invasion strategy of T. guizhouense depends on the attacked species and that red and far-red light increased aerial hyphal growth and led to faster overgrowth or invasion of the colonies. Molecular experiments and transcriptome analyses revealed that red and far-red light are sensed by phytochrome FPH1 and further transmitted by the downstream MAPK HOG pathway and the bZIP transcription factor ATF1. Overexpression of the red- and far-red light-induced fluffy gene fluG in the dark resulted in abundant aerial hyphae formation and thereby improvement of its antagonistic ability against phytopathogenic fungi. Hence, light-induced fluG expression is important for the mycoparasitic interaction. The increased aggressiveness of fluG-overexpressing strains was phenocopied by four random mutants obtained after UV mutagenesis. Therefore, aerial hyphae formation appears to be a trait for the antagonistic potential of T. guizhouense.

Bio-Priming with Bacillus Isolates Suppresses Seed Infection and Improves the Germination of Garden Peas in the Presence of Fusarium Strains

Seed infection caused by Fusarium spp. is one of the major threats to the seed quality and yield of agricultural crops, including garden peas. The use of Bacillus spp. with multiple antagonistic and plant growth-promoting (PGP) abilities represents a potential disease control strategy. This study was performed to evaluate the biocontrol potential of new Bacillus spp. rhizosphere isolates against two Fusarium strains affecting garden peas. Six Bacillus isolates identified by 16S rDNA sequencing as B. velezensis (B42), B. subtilis (B43), B. mojavensis (B44, B46), B. amyloliquefaciens (B50), and B. halotolerans (B66) showed the highest in vitro inhibition of F. proliferatum PS1 and F. equiseti PS18 growth (over 40%). The selected Bacillus isolates possessed biosynthetic genes for endoglucanase (B42, B43, B50), surfactin (B43, B44, B46), fengycin (B44, B46), bacillomycin D (B42, B50), and iturin (B42), and were able to produce indole-3-acetic acid (IAA), siderophores, and cellulase. Two isolates, B. subtilis B43 and B. amyloliquefaciens B50, had the highest effect on final germination, shoot length, root length, shoot dry weight, root dry weight, and seedling vigor index of garden peas as compared to the control. Their individual or combined application reduced seed infection and increased seed germination in the presence of F. proliferatum PS1 and F. equiseti PS18, both after seed inoculation and seed bio-priming. The most promising results were obtained in the cases of the bacterial consortium, seed bio-priming, and the more pathogenic strain PS18. The novel Bacillus isolates may be potential biocontrol agents intended for the management of Fusarium seed-borne diseases.

Genomic insights into Streptomyces hygroscopicus subsp. hygroscopicus SRF1: a potential biocontrol agent against fusarium wilt with plant growth-promoting abilities in tomatoes

ABSTRACT Streptomyces sp. isolate SRF1 has previously demonstrated promising results in controlling various plant fungi under in vitro conditions. However, further exploration of its genome and its efficacy in disease control and plant growth promotion under in vivo conditions is warranted. This study aimed to utilise whole genome sequencing (WGS) to classify Streptomyces sp. isolate SRF1 at the species level and predict genes associated with antagonistic ability and plant growth promotion, thereby assessing its potential as a biocontrol agent against fusarium wilt and a promoter of plant growth. WGS was employed to elucidate the taxonomic classification of isolate SRF1 and predict genes involved in disease suppression and plant growth promotion. In vitro assays were conducted to evaluate its antagonistic activity against Fusarium oxysporum f. sp. lycopersici (Fol) and its production of cellulase, amylase, indole-3-acetic acid (IAA), and siderophores. Pot experiments were carried out using SRF1 cell suspension and culture filtrate to assess its efficacy against Fol and its impact on tomato growth. Real-time PCR analysis was performed to correlate gene expression levels with observed activities. The results showed that isolate SRF1 was classified as S. hygroscopicus subsp. hygroscopicus and demonstrated antagonism against Fol. Furthermore, WGS revealed genes or gene clusters associated with disease control, including those encoding antifungal agents such as butyrolactol A, nigericin, and hygromycin A. Additionally, genes responsible for auxin biosynthesis, siderophore production, and carbohydrate-digesting enzymes such as chitinase, cellulase, and amylase were identified, suggesting potential roles in disease suppression and plant growth promotion.

Isolation and Identification of Chicken-Derived Lactic Acid Bacteria: In Vitro Probiotic Properties and Antagonistic Effects against Salmonella pullorum, Staphylococcus aureus, and Escherichia coli.

The development of probiotics capable of quickly colonizing the intestines of animals is important in promoting the healthy growth of livestock. The aim of this study was to screen lactic acid bacteria (LAB) from the intestinal microbiota of chickens with potential applications, and to evaluate their probiotic properties and antagonistic abilities against Salmonella pullorum, Staphylococcus aureus, and Escherichia coli. The results showed that a total of 79 strains with the characteristics of LAB were isolated from the chicken cecum microbiota, of which 7 strains exhibited strong inhibitory activity against S. pullorum, S. aureus, and E. coli. Performing 16s rDNA sequencing revealed that these seven strains were Lactiplantibacillus pentosus (n = 1), Lactiplantibacillus plantarum (n = 3), Lactiplantibacillus paraplantarum (n = 1), Lactiplantibacillus argentoratensis (n = 1), and Lactiplantibacillus fabifermentans (n = 1). Among them, L. pentosus R26 and L. plantarum R32 exhibited superior antibacterial activity. These two strains demonstrated high lactic acid production ability, with survival rates of 86.29% and 87.99% after 3 h of treatment at pH 1.5, 86.66% and 85.52% after 3 h of treatment with 0.5% bile salts, 90.03% and 88.16% after 2 h of treatment with simulated gastric fluid, and 98.92% and 98.22% after 2 h of treatment with simulated intestinal fluid, respectively. Co-cultivation with L. pentosus R26 for 24 h resulted in 50% of the pathogens being antagonized, while almost complete inhibition was observed following 72 h of co-cultivation. In conclusion, L. pentosus R26 and L. plantarum R32 exhibited high antibacterial activity and acid production capability, while also demonstrating satisfactory tolerance to low pH values and high concentrations of bile salts and digestive fluid. The probiotic characteristics and stress resistance of L. pentosus R26 were slightly superior to those of L. plantarum R32, indicating its potential for development as a probiotic.

Inhibition of Verticillium Wilt in Cotton through the Application of Pseudomonas aeruginosa ZL6 Derived from Fermentation Residue of Kitchen Waste.

To isolate and analyze bacteria with Verticillium wilt-resistant properties from the fermentation residue of kitchen wastes, as well as explore their potential for new applications of the residue. A total of six bacterial strains exhibiting Verticillium wilt-resistant capabilities were isolated from the biogas residue of kitchen waste fermentation. Using a polyphasic approach, strain ZL6, which displayed the highest antagonistic activity against cotton Verticillium wilt, was identified as belonging to the Pseudomonas aeruginosa. Bioassay results demonstrated that this strain possessed robust antagonistic abilities, effectively inhibiting V. dahliae spore germination and mycelial growth. Furthermore, P. aeruginosa ZL6 exhibited high temperature resistance (42°C), nitrogen fixation, and phosphorus removal activities. Pot experiments revealed that P. aeruginosa ZL6 fermentation broth treatment achieved a 47.72% biological control effect compared to the control group. Through activity tracking and protein mass spectrometry identification, a neutral metalloproteinase (Nml) was hypothesized as the main virulence factor. The mutant strain ZL6ΔNml exhibited a significant reduction in its ability to inhibit cotton Verticillium wilt compared to the strain P. aeruginosa ZL6. While the inhibitory activities could be partially restored by a complementation of nml gene in the mutant strain ZL6CMΔNml. This research provides a theoretical foundation for the future development and application of biogas residue as biocontrol agents against Verticillium wilt and as biological preservatives for agricultural products. Additionally, this study presents a novel approach for mitigating the substantial amount of biogas residue generated from kitchen waste fermentation.