Antagonistic Bacteria Research Articles

Seed inoculation with antagonistic bacteria limits occurrence of E. coli O157:H7gfp + on baby spinach leaves

BackroundDuring the last decades, outbreaks of foodborne illnesses have increasingly been linked to fresh and/or minimally processed fruit and vegetables. Enterohemorrhagic Escherichia coli was the causal agent for major outbreaks in Europe with leafy green vegetables and sprouts. To improve food safety, microbial antagonism has received attention during recent years and could be one of the solution to prevent contamination of food borne pathogens on fresh produce. Here we investigate the antagonistic effect of three bacterial strains (Pseudomonas orientalis, P. flavescens and Rhodococcus sp.) isolated from spinach leaves against E. coli O157:H7gfp + under laboratory and greenhouse conditions.ResultsOur results shows that significantly less culturable E.coli O157:H7gfp + were retrieved from the spinach canopy subjected to antagonist seed treatment than canopy inoculation. Seeds inoculated with Rhodococcus sp. significantly reduced growth of E. coli O157:H7gfp + compared with the other antagonists. The result from the in vitro study shows a significant reduction of growth of E. coli O157:H7gfp+, but only after 44 h when E. coli O157:H7gfp + was propagated in a mixture of spent media from all three antagonists.ConclusionsThe antagonistic effect on phyllospheric E.coli O157:H7gfp + observed after seed inoculation with Rhodococcus sp. might be an indication of induced resistance mechanism in the crop. In addition, there was a small reduction of culturable E.coli O157:H7gfp + when propagated in spent media from all three antagonists. Nutritional conditions rather than metabolites formed by the three chosen organisms appear to be critical for controlling E. coli O157:H7gfp+.

Plant Seeds Commonly Host Bacillus spp., Potential Antagonists of Phytopathogens.

In agriculture, horticulture and plantation forestry, Bacillus species are the most commonly applied antagonists and biopesticides, targeting plant pathogens and insect pests, respectively. Bacillus isolates are also used as bacterial plant biostimulants, or BPBs. Such useful isolates of Bacillus are typically sourced from soil. Here, we show that Bacillus - and other antagonistic microbes - can be sourced from a broad range of plant seeds. We found that culturable Bacillus isolates are common in the seeds of 98 plant species representing 39 families (i.e., 87% of the commonly cultured bacteria belonged to Bacillales). We also found that 83% of the commonly cultured fungi from the seeds of the 98 plant species belonged to just three orders of fungi-Pleosporales, Hypocreales and Eurotiales-that are also associated with antagonism. Furthermore, we confirmed antagonism potential in agaro with seed isolates of Bacillus from Pinus monticola as a representative case. Eight isolates each of seed Bacillus, seed fungi, and foliar fungi, all from P. monticola, were paired in a total of 384 possible pair-wise interactions (with seed and foliar fungi as the targets). Seed Bacillus spp. were the strongest antagonists of the seed and foliar fungi, with a mean interaction strength 2.8 times greater than seed fungi (all either Eurotiales or Hypocreales) and 3.2 times greater than needle fungi. Overall, our study demonstrates that seeds host a taxonomically narrow group of culturable, antagonistic bacteria and fungi.

A Fluorescent Reporter-Based Evaluation Assay for Antibacterial Components Against Xanthomonas citri subsp. citri.

Xanthomonas citri subsp. citri (Xcc) is the agent of citrus bacterial canker (CBC) disease, which has significantly reduced citrus quantity and quality in many producing areas worldwide. Copper-based bactericides are the primary products for CBC control and management, but the problems derived from copper-resistant and environmental contamination have become issues of anxiety. Thus, there is a need to find alternative antibacterial products instead of relying on a single type of agent. This study developed a method to evaluate the inhibition of antibacterial agents using the fluorescence-labeled recombinant Xcc strain (Xcc-eYFP). The optimization of timelines and parameters for the evaluation of antibacterial agents involved the use of a Spark™ multimode microplate reader. This evaluation and screening method can be applied to bactericides, cocktail-mixture formulations, antagonistic bacteria, and derived metabolites. The results showed that the minimum inhibitory concentration (MIC) of commercial bactericides determined by fluorescence agrees with the MIC values determined by the conventional method. A screened cocktail-mixture bactericide presents more activity than the individual agents during the protective effects. Notably, this method has been further developed in the screening of Xcc-antagonistic bacterial strains. In summary, we provide a validated strategy for screening and evaluation of different antibacterial components for inhibition against Xcc for CBC control and management.

Effectiveness of antagonistic bacteria, commercial fungicides, and fourth generation quaternary ammonium salts, against Fusarium oxysporum f. sp. cubense race “1 or 2”

Effectiveness of antagonistic bacteria, commercial fungicides, and fourth generation quaternary ammonium salts, against Fusarium oxysporum f. sp. cubense race “1 or 2”

Microbial mutualism suppression by Trichoderma and Bacillus species for controlling the invasive ambrosia beetle Xylosandrus compactus

Xylosandrus compactus (Eichhoff) (Coleoptera: Curculionidae: Scolytinae) is among the most invasive ambrosia beetles causing severe damage to host plants belonging to various ecosystems. Foundress females excavate galleries into the plant xylem introducing mutualistic ambrosia fungi which are the exclusive food source for their offspring. The cryptic habits of this fungus-farming insect and its wide host range facilitated its rapid spreading worldwide. Despite several advances in deepening the bio-ecology of this beetle, there is still a general lack of information about effective control strategies. In this context, microbials, such as antagonistic bacteria and mycoparasitic fungi, can have the potential to act as alternative management tools. Here, we evaluated, for the first time, the potential of commercially available microbial agents for suppressing the growth of the main beetle mutualist, Ambrosiella xylebori, and consequently to hamper the beetle progeny development. The antagonistic activity of five Trichoderma and two Bacillus-based biofungicides was first evaluated in vitro by means of dual-culture experiments in Petri dishes. Then, beetle bioassays were conducted by exposing carob twigs, previously treated with different concentrations of each biofungicide, to beetle foundresses. Tested microbial antagonists significantly suppressed the growth of A. xylebori on Petri dishes. A significant reduction of the beetle progeny was observed in galleries of treated twigs compared to controls. The higher reduction in mutualist growth and brood production was obtained within galleries of T. atroviride treated twigs. Our results show the potential of the tested microbials to suppress the beetle mutualist growth within galleries and consequently to affect the development of its progeny.

PM 7/20 (3) Erwinia amylovora

PM 7/20 (3) <i>Erwinia amylovora</i>

The application of antagonistic yeasts and bacteria: An assessment of in vivo and under field conditions pattern of Fusarium mycotoxins in winter wheat grain

Bacteria of the genus Sphingomonas, Aureobasidium pullulans yeast-like fungus and yeast Debaryomyces hansenii naturally colonize wheat grain. Selected isolates of these microorganisms, antagonistic against Fusarium spp., can be applied to wheat spikes to complement chemical control methods. The aim of this study was to determine the content of Fusarium mycotoxins in winter wheat grain in vivo and under field conditions, and to analyze the interactions between antagonistic microorganisms and F. culmorum and F. avenaceum pathogens in dual cultures. Seventeen toxic metabolites produced by Fusarium fungi were identified in grain: deoxynivalenol, deoxynivalenol-3-glucoside, culmorin, 15-hydroxyculmorin, 5-hydroxyculmorin, HT-2 toxin, nivalenol, nivalenol-3-glucoside, aurofusarin, enniatins, zearalenone, moniliformin, equisetin, and apicidin. Integrated fungicide and biological treatments decreased deoxynivalenol levels in grain in the field conditions from 141.36 to 72.76 μg/kg. Deoxynivalenol was not detected in grain treated with D. hansenii suspension, and culmorin content was 38 times lower than in unprotected grain. Fungicides and integrated treatments involving D. hansenii also decreased enniatin A1 content by 76.61 and 48.17%. In vitro yeasts considerably reduced moniliformin and enniatin concentrations by 7.67–92.87%. Antagonistic microorganisms, which inhibit the growth of Fusarium fungi through antibiosis and competition for nutrients, can effectively reduce the production of selected Fusarium toxins when combined with fungicides in the integrated approach.

Evaluation of Rhizosphere Bacterial Antagonists against Ralstonia solanacearum Causing Tomato (Lycopersicon esculentum) Wilt in Central Ethiopia

Tomato (Lycopersicon esculentum) is one of the most commonly grown vegetables in Ethiopia. However, diseases such as bacterial wilt caused by Ralstonia solanacearum have been limiting the production. The rhizosphere is an important source of antagonistic bacteria against soilborne pathogens. This study aimed to investigate the antagonistic potential of rhizosphere bacteria against R. solanacearum in vitro. The pathogen was isolated from wilted tomato plants and tested for hypersensitivity reactions to ascertain the virulent R. solanacearum. Antagonistic rhizobacteria were also isolated from the rhizosphere of healthy tomatoes. Isolates were identified based on cultural characteristics and biochemical tests. The antagonistic effect of rhizobacteria against R. solanacearum was tested in vitro. In addition, the growth of rhizobacterial isolates was determined at different levels of temperature, pH, and NaCl. Of the 36 randomly collected colonies, 7 isolates were identified as Ralstonia spp., all of which were grouped under R. solanacearum biovar III. Similarly, 57 rhizobacteria were isolated, and only 14 had shown antagonistic effects against R. solanacearum. The antagonistic rhizobacteria were identified as Pseudomonas or Bacillus species. Significantly higher (p ≤ 0.05) antagonistic activity (14.66 mm inhibition zone) was recorded by Pseudomonas isolate (P6) than recorded by the rest of the isolates and the positive control. Nine rhizobacterial isolates (out of 14) demonstrated higher or equal inhibition zones recorded by the positive controls. All isolates grew at temperatures ranging 15–45°C, pH 5–9, and 2–5% NaCl. The Bacillus spp. grew at all conditions except at pH 3, showing that they can tolerate wide range of growth conditions. The results of this study showed the presence of potential antagonistic bacteria against R. solanacearum in the study area, which can be used for the control of bacterial wilt of tomato as an alternative management option. Further study is required to determine the efficacy at greenhouse and field conditions.

Plant-associated microbiota as a source of antagonistic bacteria against the phytopathogen Erwinia amylovora.

Control of bacterial plant diseases is a major concern, as they affect economically important species and spread easily, such as the case of fire blight of rosaceous caused by Erwinia amylovora. In the search for alternatives to the use of agrochemicals and antibiotics, this work presents a screening of natural bacterial antagonists of this relevant and devastating phytopathogen. We recovered bacterial isolates from different plant tissues and geographical origins and then selected those with the strongest ability to reduce fire blight symptoms ex vivo and remarkable in vitro antagonistic activity against E. amylovora. None of them elicited a hypersensitivity reaction in tobacco leaves, most produced several hydrolytic enzymes and presented other biocontrol and/or plant growth-promoting activities, such as siderophore production and phosphate solubilization. These isolates, considered as biocontrol candidates, were identified by 16S rRNA sequencing as Pseudomonas rhizosphaerae, Curtobacterium flaccumfaciens, Enterobacter cancerogenus, Pseudomonas azotoformans, Rosenbergiella epipactidis and Serratia plymuthica. This is the first time that the last five bacterial species are reported to have biocontrol potential against E. amylovora.

Metabolomic Insights of the Effects of Bacterial Algicide IRI-160AA on Dinoflagellate Karlodinium veneficum.

Shewanella sp. IRI-160 is an algicidal bacterium that secretes an algicide, IRI-160AA. This algicide specifically targets dinoflagellates, while having no adverse effects on other algal species tested. Dinoflagellates exposed to IRI-160AA exhibited increased production of reactive oxygen species (ROS), DNA damage, and cell cycle arrest, implying a programmed pathway leading to cell death (PCD). Here, a metabolomic analysis was conducted on dinoflagellate Karlodinium veneficum and a control cryptophyte species Rhodomonas exposed to IRI-160AA to investigate the cellular mechanisms behind the physiological effects and the specificity of this algicide. Results of this research supported previous observations about physiological responses to the algicide. A suite of metabolites was identified that increased in the cell pellets of K. veneficum but not in Rhodomonas, including oxidative stress biomarkers, antioxidants, and compounds involved in DNA damage and PCD. Overall, the results of this study illustrated the metabolomic mechanisms underlying the algicidal effects of IRI-160AA on dinoflagellates. This research also provided insights and future directions for studies on the cellular response of dinoflagellates exposed to antagonistic bacteria in the environment.

Identification, Characterization, and Efficacy Evaluation of Bacillus velezensis for Shot-Hole Disease Biocontrol in Flowering Cherry.

Though information exists regarding the pathogenesis of the shot-hole disease (SH) in flowering cherry (FC), there has been a lack of research focusing on SH management. Therefore, here, we investigated the inhibitory activities of antagonistic bacteria against SH pathogens both in vitro and in vivo as well as their biochemical characteristics and bioactive compounds. Two biosurfactant-producing bacterial antagonists, identified as Bacillus velezensis strains JCK-1618 and JCK-1696, exhibited the best effects against the growth of both bacterial and fungal SH pathogens in vitro through their cell-free culture filtrates (CFCFs). These two strains also strongly inhibited the growth of the pathogens via the action of their antimicrobial diffusible compounds and antimicrobial volatile organic compounds (VOCs). Crude enzymes, solvent extracts, and biosurfactants of the two strains exhibited antimicrobial activities. Liquid chromatography/electrospray ionization time-of-flight mass spectrometric analysis of the partially purified active fractions revealed that the two antagonists produced three cyclic lipopeptides, including iturin A, fengycin A, and surfactin, and a polyketide, oxydifficidin. In a detached leaf assay, pre-treatment and co-treatment of FC leaves with the CFCFs led to a large reduction in the severity of the leaf spots caused by Epicoccum tobaicum and Bukholderia contaminans, respectively. In addition, the two antagonists produced indole-3-acetic acid, siderophore, and a series of hydrolytic enzymes, along with the formation of a substantial biofilm. To our knowledge, this is the first report of the antimicrobial activities of the diffusible compounds and VOCs of B. velezensis against the SH pathogens and their efficiency in the biocontrol of SH.

Appropriate Soil Heat Treatment Promotes Growth and Disease Suppression of Panax notoginseng by Interfering with the Bacterial Community.

In our greenhouse experiment, soil heat treatment groups (50, 80, and 121°C) significantly promoted growth and disease suppression of Panax notoginseng in consecutively cultivated soil (CCS) samples (p < 0.01), and 80°C worked better than 50°C and 121°C (p < 0.01). Furthermore, we found that heat treatment at 80°C changes the microbial diversity in CCS, and the inhibition ratios of culturable microorganisms, such as fungi and actinomycetes, were nearly 100%. However, the heat-tolerant bacterial community was preserved. The 16S rRNA gene and internal transcribed spacer (ITS) sequencing analyses indicated that the soil heat treatment had a greater effect on the Chao1 index and Shannon's diversity index of bacteria than fungi, and the relative abundances of Firmicutes and Proteobacteria were significantly higher than without heating (80 and 121°C, p < 0.05). Soil probiotic bacteria, such as Bacillus (67%), Sporosarcina (9%), Paenibacillus (6%), Paenisporosarcina (6%), and Cohnella (4%), remained in the soil after the 80°C and 121°C heat treatments. Although steam increased the relative abundances of most of the heat-tolerant microbes before sowing, richness and diversity gradually recovered to the level of CCS, regardless of fungi or bacteria, after replanting. Thus, we added heat-tolerant microbes (such as Bacillus) after steaming, which reduced the relative abundance of pathogens, recruited antagonistic bacteria, and provided a long-term protective effect compared to the steaming and Bacillus alone (p < 0.05). Taken together, the current study provides novel insight into sustainable agriculture in a consecutively cultivated system.

Biocontrol potential of plant growth-promoting rhizobacteria (PGPR) against Sclerotiorum rolfsii diseases on sugar beet (Beta vulgaris L.)

A total of 49 bacterial isolates were collected from the sugar beet rhizosphere in two regions of Morocco (Kenitra and Meknes). These bacteria were tested for their inhibitory activity against Sclerotium rolfsii Sacc., the causative pathogen of damping-off and root rot of sugar beet. Ten isolates showed a high ability to inhibit the mycelial growth of the pathogenic fungus in dual culture bioassays. The molecular identification based on 16S ribosomal DNA gene revealed that these isolates belong to the Bacillus genus. In addition, these bacterial isolates have also been characterized in terms of the production of certain antifungal products as well as for their capacities as plant growth-promoting traits. Under greenhouse conditions, sugar beet seeds treated with the each bacterium showed significant reduction in damping-off disease. Plants from treated seeds showed significant increases in both the length of shoots and roots, and the plant fresh and dry weight. Iinterestingly, these selected bacterial isolates displayed high antagonistic activity against S. rolfsii, and significantly reduced the severity and incidence of root rot disease. Therefore, these results highlighted that the soil harbors antagonistic bacteria offering several plant growth-promoting (PGP) traits, which can be exploited as a powerful growth promoter and/or biological control agent in sugar beet plants.

Antagonistic and growth enhancement activities of native Pseudomonas spp. against soil and tuber-borne diseases of potato (Solanum tuberosum L.)

BackgroundSoil and tuber-borne diseases are serious threat for potato cultivation worldwide which causes severe economical losses in terms of yield, quantity and quality. Generally, these diseases managed by chemical pesticide, are a major concern for human health and environment. Therefore, finding an eco-friendly alternative management strategies are necessary. The native bacterial isolates collected from different crops rhizosphere soil were evaluated against Rhizoctonia solani, Sclerotinia sclerotiorum, Sclerotium rolfsii and Fusarium spp and were also tested for their growth enhancement attributes on potato crop and phosphate solubilising efficiency.ResultsBased on the morphological and phenotypic characters, most of the isolates were identified as Pseudomonas spp (18 isolates). A total of twenty-two bacterial isolates were screened for bio-control activity in dual culture assay. Isolate Pf14 showed the highest mycelial inhibitory potential (ranged from 62.2 to 59.3%) against R. solani, S. sclerotiorum, S. rolfsii and Fusarium spp. In sealed plate assay, Pf14 produced antifungal volatile compounds that significantly inhibited mycelial growth (ranged from > 80 to > 50%). Maximum reduction in fungal biomass (ranged from > 80%) was observed in King’s broth in shake liquid culture in all the pathogens. Cell-free culture filtrate of the selected isolate inhibited mycelial growth ranged from 68.9 to 42.6% of the tested pathogens with 48-h old culture filtrate. Additionally, the isolates exhibited higher phosphorus solubilizing efficiency on PVK media. Under field conditions, talc based formulation of Pf14 showed enhanced agronomical characters and inhibits black scurf severity up to 67.59%. This treatment also recorded a highest tuber yield (21.90 t/ha) with increase of 15.38% in comparison to untreated control.ConclusionOverall, antagonistic bacterium Pf14 can be recommended as bio fertilizers for eco-friendly management of major potato fungal diseases as well as increasing marketable yield and used as an alternative to the pesticides and chemical fertilizers.

Biocontrol Approaches against Escherichia coli O157:H7 in Foods.

Shiga-toxin-producing Escherichia coli O157:H7 is a well-known water- and food-borne zoonotic pathogen that can cause gastroenteritis in humans. It threatens the health of millions of people each year; several outbreaks of E. coli O157:H7 infections have been linked to the consumption of contaminated plant foods (e.g., lettuce, spinach, tomato, and fresh fruits) and beef-based products. To control E. coli O157:H7 in foods, several physical (e.g., irradiation, pasteurization, pulsed electric field, and high-pressure processing) and chemical (e.g., using peroxyacetic acid; chlorine dioxide; sodium hypochlorite; and organic acids, such as acetic, lactic, and citric) methods have been widely used. Although the methods are quite effective, they are not applicable to all foods and carry intrinsic disadvantages (alteration of sensory properties, toxicity, etc.). Therefore, the development of safe and effective alternative methods has gained increased attention recently. Biocontrol agents, including bacteriophages, probiotics, antagonistic bacteria, plant-derived natural compounds, bacteriocins, endolysins, and enzymes, are rapidly emerging as effective, selective, relatively safe for human consumption, and environmentally friendly alternatives. This paper summarizes advances in the application of biocontrol agents for E. coli O157:H7 control in foods.

Prevalence of Wheat Associated Bacillus spp. and Their Bio-Control Efficacy Against Fusarium Root Rot.

Bacillus spp. are the most prevalent group of bacteria in nature. Their prevalence depends upon multiple factors, namely, sporulation, antagonism, and production of secondary metabolites. The development of an eco-friendly approach to cope with edible crops diseases is very substantial for humans. In the present study, 658 isolates were obtained from wheat grown in the wheat rice cropping system and tested for their antagonistic activity against four wheat root rot pathogens, namely, Fusarium oxysporum, Fusarium moniliforme, Macrophomina phaseolina, and Rhizoctonia solani. Out of 658, 106 isolates were found antagonistic to either single or multiple fungi. Out of 106 antagonistic bacteria, 62 (23%) were rhizospheric, 28 (14%) were root endospheric, and 16 (9%) were leaf endospheric. Based on mean inhibition against all fungi, the bacterial strains SM-39 and SM-93 showed maximum antagonistic activity. The 16S rRNA gene analysis revealed that most of the antagonistic bacteria exhibiting ≥48% antagonism were Bacillus spp. (98%), except two were Klebsiella spp. (2%). The bacterial strains exhibited phylogenetic lineage with the type strains of the respective genus based on the 16S rRNA gene sequences. In the net house experiment, Bacillus velezensis (SM-39) and Bacillus cabrialesii (SM-93) significantly suppressed Fusarium root rot severity in wheat (42–62%). Plants treated with these strains had lower electrolytic leakage (29–36%), as compared to untreated (44%). Relative water content was much higher (46–58%) for plants inoculated with these strains. These antagonistic strains also considerably colonized the wheat rhizosphere with a cell population of 5.8–6.9.log CFU/g of soil. The rhizosphere of wheat grown in the wheat-rice cropping system could be the potential habitat of effective biocontrol agents.

Identification and Characterization of Bacillus tequilensis GYUN-300: An Antagonistic Bacterium Against Red Pepper Anthracnose Caused by Colletotrichum acutatum in Korea.

Anthracnose is a fungal disease caused by Colletotrichum species and has detrimental effects on many crops, including red pepper. This study used Bacillus tequilensis GYUN-300 (GYUN-300), which exhibit antagonistic activity against the fungal pathogen, Colletotrichum acutatum. This pathogen causes anthracnose that manifests primarily as a fruit rot in red pepper. There have been little efforts to identify antagonistic bacteria from mushrooms; this strain of bacteria was identified as B. tequilensis using BIOLOG and 16S rDNA sequencing analysis. The genetic mechanism underpinning the biocontrol traits of GYUN-300 was characterized using the complete genome sequence of GYUN-300, which was closely compared to related strains. GYUN-300 inhibited mycelial growth and spore germination of C. acutatum under in vitro conditions. Important antagonistic traits, such as siderophore production, solubilization of insoluble phosphate, and production of lytic enzymes (cellulase, protease, and amylase), were observed in GYUN-300, These trains promoted growth in terms of seed germination and vigorous seedling growth compared to the non-treated control. When red pepper fruits were treated with GYUN-300, the preventive and curative effects were 66.6 and 38.3% effective, respectively, in wounded red pepper fruits; there was no difference between the preventive and curative effects in non-wounded red pepper fruits. Furthermore, GYUN-300 was resistant to several commercial fungicides, indicating that GYUN-300 bacterial cells may also be used synergistically with chemical fungicides to increase biocontrol efficiency. Based on in vitro results, GYUN-300 played a role to control anthracnose disease effectively in field conditions when compared to other treatments and non-treated controls. The results from this study provide a better understanding of the GYUN-300 strain as an effective biocontrol agent against red pepper anthracnose; this form of biocontrol provides an environment-friendly alternative to chemical fungicides.

Plant growth-promoting and antibacterial activities of cultivable bacteria alive in tobacco field against Ralstonia solanacearum.

Bacterial wilt disease caused by Ralstonia solanacearum leads to decrease of crops yield. Investigation of cultivable bacteria diversity provides more microbial species for screening antagonistic bacteria. In the present study, a variety of cultivation methods were used to investigate the diversity of cultivable bacteria alive in tobacco field. A total of 441 bacterial strains were obtained that belonged to four phyla, 49 genera and 146 species. Actinobacteria and Proteobacteria were the dominant phyla. Agrobacterium, Arthrobacter, Bacillus, Klebsiella, Paenarthrobacter, Pseudomonas and Pseudarthrobacter were the dominant genera. Some rare genera were discovered including Bosea, Cedecea, Delftia and Dyella. Diversity, species and abundances of bacteria altered under different cultivation conditions. One hundred three bacterial strains showed plant growth-promoting attributes. Twenty Bacillus strains showed high antibacterial activity against R. solanacearum. In field experiments, individual strain and consortia of Bacillus subtilis, B. siamensis and B. vallismortis effectively inhibited bacterial wilt. The core genes that controlled synthesis of secondary metabolites were knocked out in B. vallismortis SSB-10. Difficidin, which was synthesized by dif operon and controlled by sfp gene, was the antibacterial substance produced by SSB-10. Difficidin destroyed cell wall and cell membrane of R. solanacearum and inhibited its motility, production of extracellular polysaccharides and cellulase activity.

Selection criteria and characterization of sporulating bacterial strains of genus &lt;i&gt;Bacillus&lt;/i&gt; – the basis of probiotic preparations and feed additives for livestock

Screening of sporulating bacterial strains of genus Bacillus isolated from various natural sources was carried out. The most active antagonistic bacteria were chosen. Probiotic properties of the selected spore-farming Bacillus were investigated: spectrum of antimicrobial action, safety for macroorganism, survival in transit via gastrointestinal tract (bile and acid resistance), lack of inhibiting effect on gut microbiota, native non-plasmid resistance to widely applied antimicrobial agents. The prospects of using the most active cultures as key components of probiotics and feed additives for farm stock, poultry and fish were demonstrated.

Characterization of peatland indigenous bacteria and their potential as biological control agents of Ganoderma sp. the causes of oil palm stem rot disease

Ganoderma is known to be the most destructive pathogen of oil palm crops in Southeast Asia, including Indonesia, and causes heavy losses. Various control methods such as technical culture, mechanical, and chemical control have been attempted, but these techniques have not been able to control the disease successfully. One of the efforts to overcome the conditions and characteristics of Ganoderma which is difficult to control is to apply biological control. This study aims to obtain candidate antagonist bacteria indigenous to peatlands that can control Ganoderma sp. This research was exploratory research with laboratory testing. Based on the exploration results, 10 isolates were obtained based on initial characteristics and were not pathogenic after the Hypersensitivity Reaction assay. Based on the results of the inhibitory ability test, 3 isolates (LPTUNRI-A1.2, A1.1, and A2.5) were obtained that could suppress the development of Ganoderma sp. LPTUNRI-Gan003 in vitro. From its characteristics, it is suspected that it has similarities with Bacillus sp.