With the help of the tensor method, the cross-spectral density matrix for the stochastic electromagnetic twist anisotropic Gaussian-Schell model (ETAGSM) beam truncated by a slit aperture propagating in turbulent atmosphere are derived. The spectral properties of this kind of beam are investigated in detail. It is shown by numerical results and analysis that the affection of the slit aperture on the spectral properties of the stochastic ETAGSM beam is obvious in the near field; while in the far field, the atmospheric turbulence plays an important role; the source beam's coherence can weaken the affection of the slit aperture and the atmospheric turbulence on the spectral properties of the stochastic ETAGSM beam truncated by a slit aperture propagating in turbulent atmosphere, while the twist properties of the source beam can strong the affection of the slit aperture on the spectral properties in the near field. Also, the spectral degree of polarization and normalized spectral density distributions and corresponding contour graphs of the stochastic ETAGSM beam truncated by a slit aperture propagating in turbulent atmosphere and free space at different propagation distances are investigated in detail.