Lithologic heterogeneity and the presence of fluids have been linked to seamount subduction and collocated with slow earthquakes. However, the deformation mechanisms and fluid conditions associated with seamount subduction remain poorly understood. The exhumed Chichibu accretionary complex on Amami-Oshima Island preserves mélange shear zones composed of mudstone-dominated mélange and basalt–limestone mélange deformed under sub-greenschist facies metamorphism. The mudstone-dominated mélange contains sandstone, siliceous mudstone, and basalt lenses in an illitic matrix. The basalt–limestone mélange contains micritic limestone and basalt lenses in a chloritic matrix derived from the mixing of limestone and basalt at the foot of a seamount. The basalt–limestone mélange overlies the mudstone-dominated mélange, possibly representing a submarine landslide from the seamount onto trench-fill terrigenous sediments. The asymmetric S–C fabrics in both mélanges show top-to-SE shear consistent with megathrust-related shear. Quartz-filled shear and extension veins in the mudstone-dominated mélange indicate brittle failure at near-lithostatic fluid pressure and low differential stress. Microstructural observations show that deformation in the mudstone-dominated mélange was accommodated by dislocation creep of quartz and combined quartz pressure solution with frictional sliding of illite, whereas the basalt-limestone mélange was accommodated by frictional sliding of chlorite and dislocation creep of coarse-grained calcite, with possible pressure solution creep and diffusion creep of fine-grained calcite. The mélange shear zones formed in association with seamount subduction record temporal changes in deformation mechanisms, fluid pressure, and stress state during megathrust shear with brittle failure under elevated fluid pressure, potentially linking tremor generation near subducting seamounts.