Global warming drives shrubs expansion. However, it is unclear how shrubs expansion affect the nutrients cycling, decomposer diversity and activity of alpine meadows. We selected two dominant shrub species in an alpine forest-Tundra ecotone on the eastern Tibetan Plateau: Rhododendron lapponicum (evergreen shrubs), and Sorbus rufopilosa (deciduous shrubs), the shrub-free tundra site as the control site. The fauna community diversity, microbial biomass, extracellular enzyme activity and enzyme stoichiometry of organic soil and mineral soil layer were determined to explore the effects of shrubs expansion. The soil total nitrogen, microbial biomass carbon and nitrogen, and some extracellular enzyme activity of the two shrubs were higher than those in CK. In addition, deciduous shrub expansion had a stronger effect on meadows ecosystem process than evergreen shrub expansion. However, both of them may alleviate the limitation of nitrogen and phosphorus in alpine meadows ecosystem, and the expansion of evergreen shrubs may also contribute to the accumulation of particulate organic matter. It is of great significance to probe the biogeochemical cycle of alpine meadows ecosystems under climate change.