Algal Groups Research Articles

Spatiotemporal dynamics of dinoflagellate communities in the Taiwan Strait and their correlations with micro-eukaryotic and bacterial communities

Dinoflagellate blooms have negative adverse effects on marine ecosystems. However, our knowledge about the spatiotemporal distribution of dinoflagellate communities and their correlations with micro-eukaryotic and bacterial communities is still rare. Here, the sediment micro-eukaryotic and bacterial communities were explored in the Taiwan Strait (TWS) by 16S and 18S rRNA gene high-throughput sequencing. We found that the dinoflagellates were the most abundant algal group in TWS, and their relative abundance was higher in spring and autumn than in summer. Moreover, the species richness and community composition of dinoflagellates showed strong seasonal patterns. NO3-N and NH4-N had the strongest correlations with the spatiotemporal dynamics of community composition of dinoflagellates. The dinoflagellates had a significantly wider niche breadth than other algal groups for NH4-N, NO3-N and NO2-N, and therefore potentially contributed to a wider distribution range and high abundance in TWS. In addition, the dinoflagellates had stronger impacts on microeukaryotes than on bacteria for both community composition and species richness. However, the dinoflagellates showed close coexistence with bacteria but loose coexistence with microeukaryotes in spring co-occurrence networks. This close coexistence suggests the potentially strong synergy effects between dinoflagellates and bacteria in spring dinoflagellate blooms in TWS. Overall, this study revealed the distribution mechanisms of dinoflagellates in TWS based on niche breadth and also unveiled the different effects of dinoflagellates on micro-eukaryotic and bacterial communities.

Pseudomonas ZY-1 and Bacillus FY-1 protecting the rice seedlings from the harm of Pseudomonas aeruginosa via indirect seawead lysis

The local ecosystems, fishery and human health are all threatened by water blooms, so effectively controlling water blooms has become an urgent and challenging issue. Biological control of water blooms is given priority due to its low cost, high efficiency and environmental friendliness. In this study, Pseudomonas ZY-1 and Bacillus FY-1, two highly-effective algicidal bacteria strains which are able to indirectly lyse algae by separating and screening from the vigorous water body in the paddy alga of Northeast China were obtained. The two bacterial strains have stronger ability to lyse alga in the bacterial liquid concentration of 106 CFU/ml, and the alga-lysing rate on 7 d reached 84.03% and 83.11% respectively. The active substance secreted by ZY-1 is not sensitive to the changes of temperature and pH value, while as FY-1 cell-free filtrate is not stable in high temperature above 50 ℃ and pH of 5, it requires the sun light to have the algaecidal effect. The cell-free filtrates of strains ZY-1 and FY-1 had the best lysis effect on Microcystis aeruginosa cells, and the chlorophyll a content of algae decreased to 0.13 ± 0.02 mg/L and 0.14 ± 0.03 mg/L respectively and the Fv/Fm of Microcystis aeruginosa decreased by 97.22% after 7 days. The algaecidal process of ZY-1 and FY-1 may be that the cell-free filtrate inhibits the photosynthesis of Microcystis aeruginosa, and meanwhile it avoids the regeneration and repair of photosynthesis of algal cells by affecting the gene expression and damaging the repair system of algal cells, so the membrane lipid peroxidation is exacerbated and then the membrane of algal cells is broken, the algal cells can’t do normal life activities, and finally the algal cell would be killed. The rice seedlings in the algal liquid treatment group are short and show root dysplasia, few roots and brown roots. After treated with cell-free filtrate of ZY-1 and FY-1, the oxidative damage of the rice is obviously reduced, and the harm from Microcystis aeruginosa is reduced, which has the repair effect to the roots of rice seedlings and its aboveground growth. The cell-free filtrate of FY-1 works better than ZY-1. The bacteria strains of ZY-1 and FY-1 have the indirect algaecide trait, which makes them the potential environmentally-friendly algaecidal bacteria and they show broad application in the agricultural production and the control of water blooms.

The Diatom Diversity and Ecological Status of a Tufa-Depositing River through eDNA Metabarcoding vs. a Morphological Approach-A Case Study of the Una River (Bosnia and Herzegovina).

Tufa deposits in karst rivers are unique habitats created by mutual interactions between specific environmental and biotope features and inhabited by diatoms as a highly abundant and diverse algal group. This pilot study aimed to investigate the diversity of diatom communities on tufa depositing habitats and assess the Una River's ecological status using a comparative molecular and morphological approach for diatom identification. The 312 base pairs of the rbcL gene were barcoded and analyzed using MiSeq reads and amplicon sequence variants (ASVs) obtained by the DADA2 pipeline. The reference database Diat.barcode v7 was used for taxonomic assignment. The morphological identification of the diatoms was carried out in parallel. In total, the combined dataset revealed 46 taxa identified at genus rank, 125 on the subgenus, and 145 on combined taxonomy rank. The metabarcoding approach mostly leads to a lower number of identified taxa at species rank (58 in molecular vs. 119 in optical inventory), resulting in higher values of beta diversity and heterogeneity in diatom assemblages in samples obtained by morphological approach. Despite the high percentage of taxonomically not assigned diatom ASVs to the species rank, high Shannon diversity index values and a similar number of taxa per locations compared to the morphological approach were obtained. Taxa Achnanthidium minutissimum (Kützing) Czarnecki, Achnanthidium pyrenaicum (Hustedt) H.Kobayasi, Amphora pediculus (Kützing) Grunow, Diatoma vulgaris Bory, Navicula cryptotenella Lange-Bertalot, and Navicula tripunctata (O.F.Müller) Bory were identified at all locations in both inventories. Although limited consistency in the diatom abundances between the two inventory datasets was found, a similar grouping of samples was observed connected to the river's longitudinal gradient. The data obtained using molecular approach in most sites indicated a mostly lower ecological status (good or moderate) compared to the data obtained from the morphological approach (high, good, and moderate). The potential of environmental DNA (eDNA) diatom metabarcoding for water monitoring and diversity studies is undeniable, but to fully realize the benefits of these methods in the future, it is essential to standardize protocols and expand the reference database for species found in specific habitats, such as tufa deposits.

Harnessing Desmochloris edaphica Strain CCAP 6006/5 for the Eco-Friendly Synthesis of Silver Nanoparticles: Insights into the Anticancer and Antibacterial Efficacy.

Microalgae-mediated nanoparticle (NP) biosynthesis is a promising green synthesis method that overcomes the challenges of conventional synthesis methods. The novel Desmochloris edaphica strain CCAP 6006/5 was isolated, purified, and characterized morphologically and genetically. GC-MS analysis of the algal biomass (DBio) phytochemicals showed the abundance for elaidic acid (18.36%) and monoolein (17.37%). UV-VIS spectroscopy helped analyze the effects of the AgNO3 concentration, algal/silver nitrate ratio, temperature, reaction time, illumination, and pH on AgNP synthesis. DBio extract or cell-free medium (DSup) of D. edaphica successfully biosynthesized small silver NPs (AgNPs), namely, DBio@AgNPs and DSup@AgNPs, under optimum reaction conditions. TEM and SEM showed a quasi-spherical shape, with average diameters of 15.0 ± 1.0 nm and 12.0 ± 0.8 nm, respectively. EDx and mapping analyses revealed that silver was the main element, the NP hydrodynamic diameters were 77.9 and 62.7 nm, and the potential charges were -24.4 and -25.8 mV, respectively. FTIR spectroscopy revealed that the DBio@AgNPs, and DSup@AgNPs were coated with algal functional groups, probably derived from algal proteins, fatty acids, or polysaccharides, representing reductant and stabilizer molecules from the synthesis process. They showed significant anticancer activity against breast cancer cells (MCF-7), low toxicity against normal kidney cells (Vero), and potent inhibitory activity against Staphylococcus aureus, Bacillus subtilis, and Shigella flexneri. D. edaphica is a novel biomachine for synthesizing small, stable and potent therapeutic AgNPs.

Whole-genome resequencing highlights the phycosphere microbial network in global populations of the edible kelp Undaria pinnatifida

The interplay between the host and microbiome has emerged as a central issue in biological science. This concept considers both host and microbiome sides to investigate their physiological and metabolic mechanisms, often referred to as a holobiont. Macroalgae, which can provide tremendous habitats to associated microorganisms in coastlines by constituting the marine forest, are promising targets to explore the interaction. Undaria pinnatifida is one of the edible brown macroalgae that is intensively cultured in Northeast Asia. Despite its ecological and economical importance, the microbiome of its phycosphere is largely unknown. In this study, we explored the microbial communities from 41 whole-genome resequencing data collected from South Korea (KR), New Zealand (NZ), and France (FR). We investigated the microbiome profiles and microbial ecological network to identify ecological and functional central taxa. We demonstrated that the microbiome profiles of KR cultivars are more similar to those of overseas introduced populations (i.e., NZ, and FR) than to those of the KR natural populations. We also identified two groups of central genera of the algal species' microbiome, the algal polysaccharide depolymerizing group (e.g., Lacinutrix and Winogradskiella) and the algal growth-promoting group (e.g., Sulfitobacter). This study supports the idea that the microbiome can be secured from unmapped reads of the host sequencing data. Furthermore, our data provide the first study on the U. pinnatifida microbiome, which probably will be used to develop new aquaculture strategies for this important seaweed.

Synergistic effects of Spirulina platensis cultivation in textile wastewater towards nutrient removal and seed germination study

Recent escalating concerns surrounding textile wastewater pollution and the urgent need for sustainable treatment solutions to mitigate its environmental impact. This study investigates the multifaceted effects of Spirulina platensis (SP) cultivation in textile wastewater from two different sources (TWW1 and TWW2), focusing on growth kinetics, Chemical Oxygen Demand (COD), and nutrient removal percentage, and seed germination enhancement. Results showed that SP exhibited comparable growth performance in TWW1 and TWW2 to the control, indicating its potential for sustainable wastewater treatment. Moreover, maximum COD removal percentages were achieved, reaching 62.59 ± 1.88 % for TWW1 and 46.68 ± 1.40 % for TWW2 on day 5. The COD removal process aligns best with the first-order kinetic model. Nutrient removal rates showed decreasing trends over time, with maximum phosphate removal percentages of 36.42 ± 0.73 % for TWW1 and 62.18 ± 1.24 % for TWW2, and maximum ammonia removal percentages of 59.34 ± 1.18 % for TWW1 and 69.31 ± 1.39 % for TWW2. FTIR analysis confirmed pollutant removal-induced changes in algal biomass functional groups. Seed germination studies indicated enhanced shoot and root development of vigna radiatas using treated TWW1 and TWW2 compared to the control, suggesting potential applications for irrigation. An increase in the lipid & carbohydrate content post-treatment was observed and it would be suitable for biofuel production. This comprehensive assessment demonstrates the synergistic benefits of phycoremediation in simultaneously removing pollutants, promoting plant growth, and enhancing wastewater treatment efficiency, underscoring its potential for sustainable water management practices.

Chemical ecology of plankton parasitism in algae

Abstract Plankton parasites such as viruses, bacteria, fungi, and unicellular eukaryotes are associated symbionts colonizing algal groups in aquatic ecosystems. They occur within a network of microbe–microbe interactions in which they parasitize phytoplankton and seaweeds, i.e., primary producers generating organic carbon and forming the basis of marine food webs. These parasites use algae as a source of nutrients and reproduce at the expense of their host, causing infectious symptoms leading to disease and death. Plankton parasites can reduce the algal populations, and the infection of one specific species may, in turn, favor the development of another, influencing the seasonal succession of algal blooms in oceans, seas, and lakes. Many parasites have free-living stages that zooplankton graze upon, representing a significant trophic link in food webs. The biology and life cycle of plankton parasites are well investigated in marine and freshwater algal hosts. Still, the chemical signaling mediating these microbial interactions and the effect of co-occurring symbionts remain underexplored. This review focuses on the diversity of plankton parasites infecting algae, with a particular emphasis on unicellular eukaryotes. The ecological role of plankton parasites, the mechanisms regulating cellular infection and host resistance, and the interplay of alga-parasite interactions with coexisting microorganisms are discussed.

Single-cell RNA-seq of the rare virosphere reveals the native hosts of giant viruses in the marine environment.

Giant viruses (phylum Nucleocytoviricota) are globally distributed in aquatic ecosystems. They play fundamental roles as evolutionary drivers of eukaryotic plankton and regulators of global biogeochemical cycles. However, we lack knowledge about their native hosts, hindering our understanding of their life cycle and ecological importance. In the present study, we applied a single-cell RNA sequencing (scRNA-seq) approach to samples collected during an induced algal bloom, which enabled pairing active giant viruses with their native protist hosts. We detected hundreds of single cells from multiple host lineages infected by diverse giant viruses. These host cells included members of the algal groups Chrysophycae and Prymnesiophycae, as well as heterotrophic flagellates in the class Katablepharidaceae. Katablepharids were infected with a rare Imitervirales-07 giant virus lineage expressing a large repertoire of cell-fate regulation genes. Analysis of the temporal dynamics of these host-virus interactions revealed an important role for the Imitervirales-07 in controlling the population size of the host Katablepharid population. Our results demonstrate that scRNA-seq can be used to identify previously undescribed host-virus interactions and study their ecological importance and impact.

Cyanobacterial Contribution to Annual Cycles of Phytoplankton in Lake Murray, SC

Freshwater lakes provide valuable recreational and tourism resources and are a major source of municipal drinking water for local communities. A primary management goal for lake systems is the maintenance of good water quality and a healthy aquatic ecosystem. Blooms of harmful or noxious species of cyanobacteria can result in severe water quality degradation. The purpose of this project was to provide baseline data on phytoplankton community composition, with special emphasis on cyanobacteria, and water quality parameters for Lake Murray, SC. The objective of this study was to determine the annual cyanobacterial contribution to total phytoplankton biomass in the lower reaches of Lake Murray. Measurements for this study were obtained at weekly to biweekly intervals from May 2021 to August 2022 on the northeast side of Lake Murray Dam, SC. Phytoplankton community composition was determined using a combination of high-performance liquid chromatography (HPLC) and ChemTax methods to measure the relative abundances of different algal groups. The phytoplankton community in Lake Murray is composed of a diverse assemblage of primarily green algae, diatoms, cyanobacteria, cryptophytes, and dinoflagellates. Community structure varied seasonally and annually. Total phytoplankton biomass remained below 7 μg of chl a l-1 and never reached “bloom” proportions (e.g., > 40 μg of chl a l-1). Planktonic cyanobacteria were present year-round in the lower reaches of Lake Murray and comprised 5–40% of the total phytoplankton biomass. Peaks in cyanobacteria abundance occurred during the late summer months. Even at the peak in August 2021, concentrations of cyanobacteria were low (1.79 μg chl a l-1). Over annual cycles, cyanobacteria had a median chl a concentration of 0.63 μg l-1 and a median contribution of 14.9%. Although we were unable to identify any specific causal mechanisms for the fluctuations in cyanobacterial biomass, we demonstrated that cyanobacteria are a consistent component of the phytoplankton community in lower Lake Murray. Baseline measures of phytoplankton during “good” water quality conditions provide invaluable data essential for managers to establish criteria for early prediction of bloom events and evaluate the effectiveness of mitigation strategies. Departures from the norm, especially during the summer and early fall, may signal the beginning of a cyanobacterial (or other algal group) bloom and provide an early warning for recreational users and municipal water intakes.

Testing effects of bottom-up factors, grazing, and competition on New Zealand rocky intertidal algal communities.

Top-down and bottom-up factors and their interaction highlight the interdependence of resources and consumer impacts on food webs and ecosystems. Variation in the strength of upwelling-mediated ecological controls (i.e., light availability and herbivory) between early and late succession stages is less well understood from the standpoint of influencing algal functional group composition. We experimentally tested the effect of light, grazing, and disturbance on rocky intertidal turf-forming algal communities. Studies were conducted on the South Island of New Zealand at Raramai on the east coast (a persistent downwelling region) and Twelve Mile Beach on the west coast (an intermittent upwelling region). Herbivory, light availability, and algal cover were manipulated and percent cover of major macroalgal functional groups and sessile invertebrates were measured monthly from October 2017 to March 2018. By distinguishing between algal functional groups and including different starting conditions in our design, we found that the mosaic-like pattern of bare rock intermingled with diverse turf-forming algae at Twelve Mile Beach was driven by a complex array of species interactions, including grazing, predation, preemptive competition and interference competition, colonization rates, and these interactions were modulated by light availability and other environmental conditions. Raramai results contrasted with those at Twelve Mile Beach in showing stronger effects of grazing and relatively weak effects of other interactions, low colonization rates of invertebrates, and light effects limited to crustose algae. Our study highlights the potential importance of an upwelling-mediated 3-way interaction among herbivory, light availability, and preemption in structuring contrasting low rocky intertidal macroalgal communities.

Past environmental changes: using sedimentary photosynthetic pigments to enhance subtropical reservoir management.

The historical impacts of eutrophication processes were investigated in six subtropical reservoirs (São Paulo, Brazil) using a paleolimnological approach. We questioned whether the levels of pigment indicators of algal biomass could provide information about trophic increase and whether carotenoid pigments could offer additional insights. The following proxies were employed: organic matter, total phosphorus, total nitrogen, photosynthetic pigments (by high-performance liquid chromatography), sedimentation rates, and geochronology (by 210 Pb technique). Principal component analysis indicated a gradient of eutrophication. In eutrophic reservoirs (e.g., Rio Grande and Salto Grande), levels of lutein and zeaxanthin increased over time, suggesting growth of Chlorophyta and Cyanobacteria. These pigments were significantly associated with algal biomass, reflecting their participation in phytoplankton composition. In mesotrophic reservoirs, Broa and Itupararanga, increases and significative linear correlations (r > 0.70) between pigments and nutrients are mainly linked to agricultural and urban activities. In the oligotrophic reservoir Igaratá, lower pigment and nutrient levels reflected lesser human impact and good water quality. This study underscores eutrophication's complexity across subtropical reservoirs. Photosynthetic pigments associated with specific algal groups were informative, especially when correlated with nutrient data. The trophic increase, notably in the 1990s, may have been influenced by neoliberal policies. Integrated pigment and geochemical analysis offers a more precise understanding of eutrophication changes and their ties to human factors. Such research can aid environmental monitoring and sustainable policy development.

Field and laboratory studies of fluorescence-based technologies for real-time tracking of cyanobacterial cell lysis and potential microcystins release

Elevated levels of dissolved microcystins (MCs) in source water due to rapid cell lysis of harmful cyanobacterial blooms may pose serious challenges for drinking water treatment. Catastrophic cell lysis can result from outbreaks of naturally-occurring cyanophages – as documented in Lake Erie during the Toledo water crisis of 2014 and in 2019, or through the application of algaecides or water treatment chemicals. Real-time detection of cyanobacterial cell lysis in source water would provide a valuable tool for drinking water plant and reservoir managers. In this study we explored two real-time fluorescence-based devices, PhycoSens and PhycoLA, that can detect unbound phycocyanin (uPC) as a potential indication of cell lysis and MCs release. The PhycoSens was deployed at the Low Service pump station of the City of Toledo Lake Erie drinking water treatment plant from July 15 to October 19, 2022 during the annual cyanobacteria bloom season. It measured major algal groups and uPC in incoming lake water at 15-min intervals during cyanobacteria dominant and senescence periods. Intermittent uPC detections from the PhycoSens over a three-month period coincided with periods of increasing proportions of extracellular MCs relative to total (intracellular and extracellular) MCs, indicating potential for uPC use as an indicator of cyanobacterial cell integrity. Following exposures of laboratory-cultured MCs-producing Microcystis aeruginosa NIES-298 (120 μg chlorophyll/L) to cyanophage Ma-LMM01, copper sulfate (0.5 and 1 mg Cu/L), sodium carbonate peroxyhydrate (PAK® 27, 6.7 and 10 mg H2O2/L), and potassium permanganate (2.5 and 4 mg/L), appearance of uPC coincided with elevated fractions of extracellular MCs. The PhycoLA was used to monitor batch samples collected daily from Lake Erie water exposed to algaecides in the laboratory. Concurrence of uPC signal and surge of dissolved MCs was observed following 24-h exposures to copper sulfate and PAK 27. Overall results indicate the appearance of uPC is a useful indicator of the onset of cyanobacterial cell lysis and the release of MCs when MCs are present.

Water‐level fluctuations and nutrient enrichment interact to alter ecosystem structure in distinct ways at different water depths

Abstract Aquatic ecosystems are often impacted by several human‐derived pressures simultaneously. A key challenge for ecologists is to develop mechanistic understanding of the cumulative effects of multiple stressors on freshwater biodiversity. We established an outdoor mesocosm experiment to examine the individual and combined effects of two key stressors on lake ecosystems globally—nutrient enrichment and amplified water‐level fluctuations—on benthic algal and macroinvertebrate assemblages along a gradient in littoral water depth. We found that nutrient enrichment and water‐level fluctuations not only altered the structure of littoral communities when acting individually, but also interacted to dynamically alter biomass and community structure in different ways at different depths. As expected, enrichment increased benthic algal biomass significantly in very shallow waters. Yet, when enrichment co‐occurred with water‐level fluctuations, this pattern was reversed, with algal biomass increasing significantly in deeper waters, but not in the shallows that were exposed to fluctuating water levels. This pattern occurred across all algal groups that we examined except for green algae. Green algae biomass increased with nutrient enrichment, was greatest in the shallows, and remained unaffected by fluctuating water levels. Water‐level fluctuations modified the functional feeding group structure of benthic macroinvertebrate communities, reducing relative densities of collector‐gatherers and increasing those of predators. However, these changes occurred only in the shallow‐most regions exposed directly to fluctuating water levels. Our results reveal how two globally important stressors of standing water systems can interact in different ways in different ecological contexts and show how stressors can combine to have unanticipated impacts that vary in space. Our findings underscore the potentially highly multifaceted and complex nature of stressor combinations that present a major and growing challenge to ecosystem management, particularly in light of accelerating global environmental change.

Comparative analysis of cyanophyceae, chlorophyceae and bacillariophyceae abundance in soils of Hassan district

A comprehensive investigation into the relative abundance of Cyanophyceae, Chlorophyceae, and Bacillariophyceae within the soils spanning the eight taluks of Hassan district has been conducted. The gathered data underwent meticulous collection and thorough analysis to elucidate the distributional patterns and compositional variances characterizing these algal taxa across diverse geographical zones. Employing a sophisticated amalgam of qualitative and quantitative methodologies, the study discerned both the numerical count and the proportional representation of each algal group within the scrutinized soil samples. Noteworthy is the observation that Alur exhibits the highest species richness, tallying an impressive count of 88 species, in stark contrast to Hassan, which presents the lowest count of 60 species. Furthermore, it is noteworthy that Sakleshpur lays claim to the highest proportion of Cyanophyceae, boasting a dominance of 84.25%. Conversely, Hassan emerges as the epicenter of Chlorophyceae and Bacillariophyceae dominance, registering percentages of 30% and 16.66%, respectively. These findings not only offer profound insights into the ecological dynamics of the region but also underscore the potential environmental implications stemming from the presence and distribution of these algal populations within the district's ecosystem.

Convergent photophysiology and prokaryotic assemblage structure in epilithic cyanobacterial tufts and algal turf communities.

As global change spurs shifts in benthic community composition on coral reefs globally, a better understanding of the defining taxonomic and functional features that differentiate proliferating benthic taxa is needed to predict functional trajectories of reef degradation better. This is especially critical for algal groups, which feature dramatically on changing reefs. Limited attention has been given to characterizing the features that differentiate tufting epilithic cyanobacterial communities from ubiquitous turf algal assemblages. Here, we integrated an insitu assessment of photosynthetic yield with metabarcoding and shotgun metagenomic sequencing to explore photophysiology and prokaryotic assemblage structure within epilithic tufting benthic cyanobacterial communities and epilithic algal turf communities. Significant differences were not detected in the average quantum yield. However, variability in yield was significantly higher in cyanobacterial tufts. Neither prokaryotic assemblage diversity nor structure significantly differed between these functional groups. The sampled cyanobacterial tufts, predominantly built by Okeania sp., were co-dominated by members of the Proteobacteria, Firmicutes, and Bacteroidota, as were turf algal communities. Few detected ASVs were significantly differentially abundant between functional groups and consisted exclusively of taxa belonging to the phyla Proteobacteria and Firmicutes. Assessment of the distribution of recovered cyanobacterial amplicons demonstrated that alongside sample-specific cyanobacterial diversification, the dominant cyanobacterial members were conserved across tufting cyanobacterial and turf algal communities. Overall, these data suggest a convergence in taxonomic identity and mean photosynthetic potential between tufting epilithic cyanobacterial communities and algal turf communities, with numerous implications for consumer-resource dynamics on future reefs and trajectories of reef functional ecology.

Benthic primary production in Young Sound, Northeast Greenland

The extreme and variable light climate of polar marine environments imposes a substantial limitation on benthic primary production and demands efficient adaptive capacities of the primary producers. This chapter reviews the composition, abundance, primary production and adaptive strategies of benthic primary producers in Young Sound. Benthic primary producers occurred in the 0-50 m depth range and the relative importance of microalgae, crustose coralline macroalgae and foliose macroalgae varied systematically with depth. On a summer day with optimal light conditions benthic primary production showed a maximum of c.
 70 mmol O2 m-2 d-1 in shallow water. Production rates declined gradually to c. 20 mmol O2 m-2 d-1at 10–20 m depth and to 2.5 mmol O2 m-2 d-1 at 30 m depth.
 Foliose macroalgae contributed markedly to primary production in shallow water but became insignificant at water depths >15 m, while benthic diatoms contributed most to primary production at intermediate water depths (5-30 m). At water depths greater than 30 m only coralline algae occurred, but their production was low because of their low abundance, low Pmax and the low ambient irradiance at those depths. All algal groups were well adapted to the ambient irradiance and could, within minutes, acclimate their photosynthetic performance to changing light conditions. The benthic primary production in Young Sound markedly surpassed the pelagic primary production down to water depths of 20 m and the results thereby underline the potential importance of benthic primary production in shallow-water Arctic ecosystems.

Patterns of Phytoplankton and Microphytobenthos Development in Channel Ecotones in the Goryn River

Studies of phytoplankton and microphytobenthos of the Goryn' River demonstrated discrete-continual character of these communities' development, which reflects occurrence of ecotones in the channel and flood land system of the river. In ecotones, upstream and downstream them the species composition, dominant complexes and quantitative parameters changed, owing to specific features and hydrological conditions of the flow forming. The algal functional groups diagnostic technique was tested to assess state of the algal communities and revelation of their development specificity in the Goryn River, which enabled to reveal mechanisms of the algal communities' modifications in terms of the functional groups within the ecotones: pool, riffle, contact zone of the river channel and ameliorated flood land.

Living Algal Community Voucher and Taxonomy in Dickinson County Iowa: A Case for Collection-Based Research

Integrative taxonomy is necessary for advancing the field of phycology and understanding regional algal diversity. Collection-based studies for the purposes of providing descriptive voucher flora of living algal communities inform future long-term monitoring and genetic barcoding studies. In this study, littoral composite samples were taken from eight sites (Center Lake, Emerson Bay, Freda Haffner Kettlehole State Preserve, Millers Bay, East Okoboji Lake, West Okoboji Lake, Big Spirit Lake, Upper Gar Lake) in Dickinson County, Iowa, for the purposes of fine level taxonomy. This region has a history of eutrophication, and algal blooms have caused Iowa water resource issues in the past. Micrography for these voucher floras was conducted for taxa representing at least 10% or more of the total estimated algal biomass of evaluated slides. Our voucher floras comprise micrographs of living cells across nine different algal groups and 54 unique taxonomic entities. Unique taxa from these sites include Glaucocystis nostochinearum Itzigsohn, Draparnaldia acuta (C.Agardh) Kützing, and Chaetophoropsis elegans (Roth) B. Wen Liu, Qian Xiong, X.Dong Liu, Z. Yu Hu & G. Xiang Liu. We also document species belonging to toxin-producing Cyanobacteria genera Mycrocystis and Dolichospermum.

Physiological differences among cryptic species of the Mediterranean crustose coralline alga Lithophyllum stictiforme (Corallinales, Rhodophyta)

ABSTRACT The crustose coralline alga Lithophyllum stictiforme is an important reef builder, forming coralligenous concretions in the Mediterranean Sea. This algal species complex is composed of eight cryptic species (or clades). The objective of our study was to compare light-dependent physiological processes within and between the two most abundant cryptic species (C1 and C4) of L. stictiforme from the Bay of Marseille (France). Physiological rates of respiration, photosynthesis and calcification were measured using incubation chambers under various irradiance levels and in the dark during the summer period. We compared the physiology of the C1 and C4 cryptic species of L. stictiforme among three algal groups: C1 (the most common in the Marseille area) from 28 m depth, C4 from the same site and depth, and C1 from a deeper site at 45 m depth. We found both interspecific (between C1 and C4) and intraspecific (within C1) physiological differences. Photosynthetic parameters showed acclimation to light (or depth) with higher values of initial slope of photosynthetic light response curve (α) and lower values of saturating irradiance (Ek) and compensating irradiance (Ec) for C1 from 45 m than for C1 and C4 from 28 m depth. At the shallower depth, significant physiological differences were observed between C1 and C4 with a higher value of maximum rate of gross photosynthesis (Pg max) in C4, suggesting better ability to grow under high irradiance. Light and dark calcification rates differed only between C4 from 28 m and C1 from 45 m depth, being intermediate in C1 from 28 m depth. On a 24 h basis, diel net calcification rates were significantly higher in specimens from the shallower waters than from the deeper waters. Physiological differences suggest physiological plasticity within the regionally dominant cryptic species C1 and species-specific physiological traits between the cryptic species C1 and C4.

RAF-like protein kinases mediate a deeply conserved, rapid auxin response

The plant-signaling molecule auxin triggers fast and slow cellular responses across land plants and algae. The nuclear auxin pathway mediates gene expression and controls growth and development in land plants, but this pathway is absent from algal sister groups. Several components of rapid responses have been identified in Arabidopsis, but it is unknown if these are part of a conserved mechanism. We recently identified a fast, proteome-wide phosphorylation response to auxin. Here, we show that this response occurs across 5 land plant and algal species and converges on a core group of shared targets. We found conserved rapid physiological responses to auxin in the same species and identified rapidly accelerated fibrosarcoma (RAF)-like protein kinases as central mediators of auxin-triggered phosphorylation across species. Genetic analysis connects this kinase to both auxin-triggered protein phosphorylation and rapid cellular response, thus identifying an ancient mechanism for fast auxin responses in the green lineage.