Alga Ahnfeltia Tobuchiensis Research Articles

Rhodoalgimonas zhirmunskyi gen. nov., sp. nov., a Marine Alphaproteobacterium Isolated from the Pacific Red Alga Ahnfeltia tobuchiensis: Phenotypic Characterization and Pan-Genome Analysis.

A novel Gram-staining negative, strictly aerobic, rod-shaped, and non-motile bacterium, designated strain 10Alg 79T, was isolated from the red alga Ahnfeltia tobuchiensis. A phylogenetic analysis based on 16S rRNA gene sequences placed the novel strain within the family Roseobacteraceae, class Alphaproteobacteria, phylum Pseudomonadota, where the nearest neighbor was Shimia sediminis ZQ172T (97.33% of identity). However, a phylogenomic study clearly showed that strain 10Alg 79T forms a distinct evolutionary lineage at the genus level within the family Roseobacteraceae combining with strains Aquicoccus porphyridii L1 8-17T, Marimonas arenosa KCTC 52189T, and Lentibacter algarum DSM 24677T. The ANI, AAI, and dDDH values between them were 75.63-78.15%, 67.41-73.08%, and 18.8-19.8%, respectively. The genome comprises 3,754,741 bp with a DNA GC content of 62.1 mol%. The prevalent fatty acids of strain 10Alg 79T were C18:1 ω7c and C16:0. The polar lipid profile consisted of phosphatidylethanolamine, phosphatidylglycerol, phosphatidylcholine, an unidentified aminolipid, an unidentified phospholipid and an unidentified lipid. A pan-genome analysis showed that the unique part of the 10Alg 79T genome consists of 13 genus-specific clusters and 413 singletons. The annotated singletons were more often related to transport protein systems, transcriptional regulators, and enzymes. A functional annotation of the draft genome sequence revealed that this bacterium could be a source of a new phosphorylase, which may be used for phosphoglycoside synthesis. A combination of the genotypic and phenotypic data showed that the bacterial isolate represents a novel species and a novel genus, for which the name Rhodoalgimonas zhirmunskyi gen. nov., sp. nov. is proposed. The type strain is 10Alg 79T (=KCTC 72611T = KMM 6723T).

Aureibaculum algae sp. nov. isolated from the Pacific red alga Ahnfeltia tobuchiensis.

A Gram stain-negative, aerobic, rod-shaped, motile by gliding and yellow-orange-pigmented bacterium, designated strain 10Alg 115T, was isolated from the red alga Ahnfeltia tobuchiensis. The phylogenetic analysis based on 16S rRNA gene sequences placed the novel strain within the family Flavobacteriaceae, phylum Bacteroidetes. The nearest neighbor of the new isolate was Aureibaculum marinum KCTC 62204T with sequence similarity of 98.1%. The average nucleotide similarity and digital DNA-DNA hybridization values between the novel strain and Aureibaculum marinum KCTC 62204T were 80% and 22.3%, respectively. The prevalent fatty acids of strain 10Alg 115T were iso-C15:0, iso-C15:1 G, iso-C17:0 3-OH, iso-C16:0 3-OH and C15:0. The polar lipid profile consisted of phosphatidylethanolamine, two unidentified aminolipids and two unidentified lipids. The DNA G + C content of the type strain calculated from the whole-genome sequence was 32.2mol%. A combination of the genotypic and phenotypic data showed that the algal isolate represents a novel species of the of genus Aureibaculum, for which the name Aureibaculum algae sp. nov. is proposed. The type strain is 10Alg 115T (= KCTC 62086T = KMM 6764T).

Effect of a Lipid Complex from the Marine Red Alga Ahnfeltia tobuchiensis on the Metabolic Responses of the Liver under Conditions of Experimental Toxic Hepatitis

Effect of a Lipid Complex from the Marine Red Alga Ahnfeltia tobuchiensis on the Metabolic Responses of the Liver under Conditions of Experimental Toxic Hepatitis

The influence of red algae ahnfeltia tobuchiensis on the growth and development of cress salad under protected ground

In the modern world, special attention is paid to the rational use of natural resources and the provision of the population with safe food for health. In this connection, the study of the effectiveness of algae-based fertilizers is a relevant and promising direction, as it allows to reduce chemical pressure on agrobiocenoses. This article presents the results of a study on the effect of fertilization from the red alga Ahnfeltia tobuchiensis on the germination and growth rate of watercress Zabava variety in protected ground conditions. When making anfeltia, it was found that the effectiveness of its use as a fertilizer significantly depends on the size of its particles. The weight of the harvested watercress crop was on average 87% higher compared to the control when using fertilizer with a particle size of 1-5 mm. The rate of development of watercress when using anfelcia with a particle size of 0.25-1.0 mm was at the control level, and the yield weight was 44.5% more than in the control. The minimum crop weight was observed when using fertilizer with a particle size of more than 5 mm. When anfelcia is added as a fertilizer to the soil in the watercress samples, an increase in the content of mineral substances in general and individual elements (potassium, calcium, sodium, manganese, etc.) is noted.

Influence of Abiotic Environmental Factors on the Chemical Composition of Ahnfeltia tobuchiensis in the Peter the Great Gulf (Sea of Japan)

The influence of abiotic environmental factors on the chemical composition of the red alga Ahnfeltia tobuchiensis was studied. The influence of the depth of growth of the algae on the concentrations of proteins, easily hydrolyzable polysaccharides, and iodine was revealed. The algae species from Stark Strait contain more carbohydrates, from Troitsa Bay, more minerals, and from the Perevoznaya Bay, more proteins and iodine. The concentrations of toxic elements (arsenic, lead, cadmium) in the algae and soils from the same places were studied. A relationship between the depth of algae growth and accumulation of toxic metals therein has been established. No relationship between the elemental compositions of algae and the corresponding soils has been revealed.

Activities of O-Glycoside Hydrolases and Other Polysaccharide-Degrading Enzymes of Cultivable Bacterial Isolates of the Pacific Red Alga Ahnfeltia tobuchiensis (Kanno et Matsubara, 1932) Makienko, 1970

The profiles of bacterial O-glycoside hydrolases and alginate lyases associated with the red alga Ahnfeltia tobuchiensis are described for the first time. A role of these enzymes in the trophic relationships of the host organism and bacteria is discussed.

The Effects of the Lipid Complex of Extract from the Marine Red Alga Ahnfeltia tobuchiensis (Kanno et Matsubara) Makienko on the Biochemical Parameters of Blood Plasma and Erythrocyte Membranes during Experimental Stress Exposure

The Effects of the Lipid Complex of Extract from the Marine Red Alga Ahnfeltia tobuchiensis (Kanno et Matsubara) Makienko on the Biochemical Parameters of Blood Plasma and Erythrocyte Membranes during Experimental Stress Exposure

Lipid Composition, Content of Polyphenols, and Antiradical Activity in Some Representatives of Marine Algae

Qualitative and quantitative composition of the lipid complex and total content of polyphenols were compared in aqueous alcoholic extracts from three species of marine macrophytes collected in Peter the Great Bay, the Sea of Japan. Examined seaweeds belonged to different phyla: green alga Ulva lactuca L. sea lettuce, brown alga Sargassum pallidum (Turner) C. Agardh sargassum pallidum, and red alga Ahnfeltia tobuchiensis (Kanno et Matsubara) Makijenko ahnfeltia tobuchiensis. It was shown that glycolipids (30.3–41.5%) and neutral lipids (34–48.5%) prevailed among total lipids in the extracts from all three algal species; phospholipids accounted for 10–25.7% of total lipids. Among neutral lipids in all the seaweeds, triacylglycerols and free sterols prevailed. The greatest quantity of triacylglycerols was found in A.tobuchiensis and that of free sterols was in S. pallidum. As to the individual fractions of phospholipids, their composition and content considerably differed. In terms of content, predominant phospholipid fractions in the extract from U. lactuca were phosphatidyl glycerol, phosphatidyl ethanolamine, and phosphatidyl inositol, those from S. pallidum were phosphatidyl ethanolamine and phosphatidyl glycerol, and those from A. tobuchiensis were phosphatidyl choline and phosphatidyl glycerol. As to the percentage of main fatty acids comprising the lipid component of the extracts from the examined algal species, it was found that the extract from brown alga S. pallidum contained the greatest content of PUFA from the family n-6. The extract from green alga U. lactuca contained the greatest content of PUFA from the family n-3. In the extract from red alga A. tobuchiensis, arachidonic (family n-6) and eicosapentaenoic (family n-3) acids prevailed among PUFA. The greatest quantity of polyphenols was detected in the extract from brown alga S. pallidum, which 15–24 times exceeded respective figures in U. lactuca and A. tobuchiensis. Moreover, the extract from S. pallidum showed a much higher level of antiradical activity in respect to ABTS+, which was 5–12.5 times greater than in U. lactuca and A. tobuchiensis, respectively.

Polaribacter staleyi sp. nov., a polysaccharide-degrading marine bacterium isolated from the red alga Ahnfeltia tobuchiensis.

A Gram-stain-negative, rod-shaped, motile by gliding and yellow-pigmented bacterium, designated strain 10Alg 139T, was isolated from the Pacific red alga Ahnfeltiato buchiensis. The phylogenetic analysis based on 16S rRNA gene sequences showed that the novel strain belonged to the genus Polaribacter, a member of the family Flavobacteriaceae, the phylum Bacteroidetes, with highest sequence similarity to Polaribacter butkevichii KMM 3938T (99.3 %) and 93.3-98.6 % to other recognized Polaribacter species. The prevalent fatty acids of strain 10Alg 139T were iso-C15 : 0 3-OH, C15 : 0 3-OH, iso-C15:0, iso-C13 : 0, C15 : 0 and C15 : 1ω6c. The polar lipid profile consisted of the major lipids phosphatidylethanolamine, two unidentified aminolipids and four unidentified lipids. The main respiratory quinone was menaquinone 6. The DNA G+C content of the type strain is 31.8 mol%. The new isolate and the type strains of recognized species of the genus Polaribacter were readily distinguished based on a number of phenotypic characteristics. A combination of the genotypic and phenotypic data showed that the isolate from alga represents a novel species of the genus Polaribacter, for which the name Polaribacterstaleyi sp. nov. is proposed. The type strain is 10Alg 139T (=KCTC 52773T=KMM 6729T).

Flavobacterium ahnfeltiae sp. nov., a new marine polysaccharide-degrading bacterium isolated from a Pacific red alga.

A Gram-negative, aerobic, rod-shaped, motile by gliding and yellow-pigmented bacterium, designated strain 10Alg 130(T), that displayed the ability to destroy polysaccharides of red and brown algae, was isolated from the red alga Ahnfeltia tobuchiensis. The phylogenetic analysis based on 16S rRNA gene sequence placed the novel strain within the genus Flavobacterium, the type genus of the family Flavobacteriaceae, the phylum Bacteroidetes, with sequence similarities of 96.2 and 95.7 % to Flavobacterium jumunjiense KCTC 23618(T) and Flavobacterium ponti CCUG 58402(T), and 95.3-92.5 % to other recognized Flavobacterium species. The prevalent fatty acids of strain 10Alg 130(T) were iso-C15:0, iso-C15:0 3-OH, iso-C17:0 3-OH, C15:0 and iso-C17:1ω9c. The polar lipid profile consisted of phosphatidylethanolamine, two unknown aminolipids and three unknown lipids. The DNA G+C content of the type strain was 34.3 mol%. The new isolate and the type strains of recognized species of the genus Flavobacterium could strongly be distinguished by a number of phenotypic characteristics. A combination of the genotypic and phenotypic data showed that the algal isolate represents a novel species of the genus Flavobacterium, for which the name Flavobacterium ahnfeltiae sp. nov. is proposed. The type strain is 10Alg 130(T) (=KCTC 32467(T) = KMM 6686(T)).

Foraminifera and Nematoda community within the area of Ahnfeltia tobuchiensis field in Stark Strait (Peter the Great Bay of the Sea of Japan)

In August of 2006 in Stark Strait (in the Peter the Great Bay) Foraminifera and Nematoda communities were investigated at two stations: in bottom under a red alga Ahnfeltia tobuchiensis bed and on a site located outside of the bed. Bottom sediments at the stations are represented by sands of various silting extent. Foraminifera dominated at both stations, the second place by abundance was occupied by Nematoda. Extremely high population density of meiobenthos, 14278.9 ± 4623.1 thousand sp./m2, was observed under the Ahnfeltia bed. The foraminifera percentage was 98.1%, which was probably connected with the mass development of diatom algae on Ahnfeltia. A high degree of domination of one Foraminifera species was recorded—Cribroelphidium frigidum. Nematoda constituted 1.5% with the prevalence of Comesomatidae family representatives. At the station situated outside of Ahnfeltia field mean population density of meiobenthos was an order lower—1731.8 ± 621.3 thousand sp./m2. Foraminifera constituted 63.8% of the total meiobenthos density with Eggerella advena as the dominating species. Among Nematoda (12.5%) Paracanthonchus macrodon, Axonolaimus seticaudatus and Monoposthia latiannulata were dominant. Foraminifera and Nematoda community under Ahnfeltia bed, where bottom sediments are more silted, had low indices of species diversity and a high degree of domination.

Structural and compositional characteristics of gelling galactan from the red alga Ahnfeltia tobuchiensis (Ahnfeltiales, the Sea of Japan)

The composition and structure of a sulfated polysaccharide from Ahnfeltia tobuchiensis, a red seaweed of Kuril Islands and Japan, were investigated. Samples of the galactan were characterized by 13C NMR and FTIR spectroscopy and chemical analysis in comparison with well-known commercial agarose preparations. The main components of the polysaccharide from A. tobuchiensis were 3,6-anhydro- l-galactose (38±4.5%) and galactose. Methoxy groups (2.2%) of the galactan are located in the position 2 of the anhydrogalactose residues. The galactan proved to be a high-sulfated agarose. Sulfur content of this polysaccharide is 0.2–0.3%, and sulfate groups may be removed by alkali treatment to a limited extent only. The precision of quantification and possibilities of analytical methods used are discussed.

Distribution Pattern of Far Eastern Sea Cucumber Apostichopus japonicus in Busse Lagoon (Southern Sakhalin)

We analyzed the distribution pattern and size structure in aggregations of the far eastern sea cucumber (trepang), Apostichopus japonicus in Busse Lagoon (Southern Sakhalin). Trepang populations, which differ in their size composition and population density, have been grouped by their spatial differentiation. It has been shown that in the absence of solid substrates in the lagoon, the animals gather on substrates such as the alga Ahnfeltia tobuchiensis and on clusters of the oyster Crassostrea gigas. It is found that on the southeastern part of the lagoon, trepang makes up an extensive aggregation confined to the bed of Ahnfeltia; the distribution of the holothurians mostly has a random pattern. In the northwestern part of the lagoon, trepang makes up aggregations on oyster and algal beds; the distribution of these aggregations shows a random pattern.

Application of High-Performance Exclusion Chromatography to Studying and Monitoring the Process of the Preparation of Agar

A procedure was proposed for the chromatographic analysis of mixtures of proteins and polysaccharides by high-performance exclusion chromatography on Shodex Asahipak GS-520H and GS-620H series-coupled columns with elution with water and refractometric and UV (280 nm) detection. The procedure substantially simplifies sample preparation. It was used for studying the solvent extraction of agar from the red alga Ahnfeltia tobuchiensis.

The hydrochemical regime of the habitat of the red algaAhnfeltia tobuchiensis population in the Bay of Izmena (Kunashir Island)

In 1989–1990 and 1997, in the Bay of Izmena (Kunashir Island), the spatial distribution ofAhnfeltia tobuchiensis (Kanno et Matsubara) Mak, an unattached agar-containing red alga, was studied, and the availability of biogenic elements for the process ofA. tobuchiensis primary production was assessed. The concentrations of dissolved O2, ammonium [NH 4 + ], and orthophosphate [PO 4 3− ], were highest in the central and northeastern areas of the bay, where the bulk of the population is situated. During the day, the mean oxygen concentration above the alga bed increased from 8.2±0.09 to 8.7±0.08 mg/l, showing a high rate of photosynthesis in the population. As a result of diurnal ammonium and orthophosphate assimilation by the alga, their concentration in bottom waters dropped from 5.1 to 3.5 and from 0.45 to 0.35 μM/l, respectively. Proceeding from the mean values of the nitrogen to phosphorus atomic ratio in the bay waters (11.5±3.3 in the morning and 10.6±3.3 in the evening) and in algal thalluses (33 in the case ofA. tobuchiensis), we conclude that the concentration of major biogenic elements is sufficient for the processes of primary production in the Bay of Izmena.

Production characteristics of the population of the red algaAhnfeltia tobuchiensis in Baklan Bight (Peter the Great Bay, Sea of Japan)

Spatial distribution and production characteristics of the population of the unattached red algaAhnfeltia tobuchiensis (Kanno and Matsubara) Mak were studied in Baklan Bight (Sea of Japan) in September 1990 and June 1991. The following environmental factors were determined: the level of photosynthetically active radiation (PAR) penetrating the water column; the water temperature; and the content of oxygen, nitrogen, phosphorus, and dissolved organic substance. the main factor limiting the net primary production (NPP) of theA. tobuchiensis population in Baklan Bight appears to be PAR intensity at the surface of the stratum. In June and September, respectively it constituted about 10% and 0.2% of the PAR on the sea surface. By means of regression analysis, the following equations were obtained to describe the relationship between NPP at the surface of the stratum and the environmental factors studied, PAR intensity being the principal variable: NPP=0.02+0.81 PAR (in June) and NPP=0.02+0.23PAR (in September). In June and September, the NPP of theA. tobuchiensis stratum amounted to 17.2 and 1.3 g/(m2 day), and the biomass to 21 and 31 thousand tons, respectively. During the eight months, its distribution changed considerably. In June and September, the daily biomass growth equaled 140.7 and 8.5 t, respectively. A 10-cm-thick layer displayed the highest production characteristics.

Production of agar and agarose from the red algaAhnfeltia tobuchiensis

A simple and inexpensive procedure of agar and agarose production from the red alga Ahnfeltia tobuchiensis was developed, which needs no additional chromatographic purification.