The aim of the paper is to give an overview on the chemistry of soil organic carbon (SOC) affecting nutrient availability, the emission of greenhouse gases and detoxifying harmful substances in soil. Humic substances represent the stable part of SOC, accounting for between 50 and more than 80% of organically bound carbon in soil. Humic substances strongly affect the soil solution concentration of several plant nutrients and may increase P-, Fe-, and Cu- solubility, thereby increasing their plant availability. Soil organic carbon, mainly humic substances, can detoxify monomeric Al in acid soils, can strongly bind toxic heavy metals, making them unavailable to the plant roots, and may strongly bind a vast variety of harmful organic pollutants. Increasing SOC is an important goal in agriculture. The inclusion of mixtures of semi-perennial plant species and cultivars may strongly increase SOC and humic substance content in soils. To increase SOC, farmyard manure and its rotted or composted forms are superior compared to the separate application of straw and slurry to soil. The storage of carbon, mainly in organic form, in soils is very important in the context of the emission of greenhouse gases. Worldwide, soils release about 10 times more greenhouse gases compared to fossil fuel combustion. Small increments in SOC worldwide will strongly affect the concentration of atmospheric CO2. The public discussion on soil fertility and greenhouse gas emissionshas been politically controlled in a way that leaves the important and positive contribution of soil organic carbon and mainly humic substances partly misinterpreted and partly underestimated.
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