Agricultural product logistics plays a high role in the development of Chinese economy, which is the most important basic link in the process of agricultural industrialization, scale and modernization. The logistics of agricultural products in China has always been at a low standard of development, slow development or even stagnation. As the most basic and important agricultural product industry in the national economy, the degree and mode of development of agricultural products have a great impact on the development of Chinese economy and people’s quality of living. Therefore, new models and approaches for the construction and development of agricultural product logistics must be actively explored to promote the standardization and scale of China’s agricultural product logistics industry. Therefore, the paper constructed a sustainable model of agricultural products logistics integration based on blockchain technology, and proposed a comprehensive logistics model of agricultural products based on intelligent blockchain, which was expected to provide some help to solve the problems of supply and demand mismatch, quality safety management, agricultural product price fluctuation and other problems in the current agricultural product circulation. The paper first introduced the intelligent blockchain technology and the concept of agricultural product logistics integration, and then constructed a sustainable model of agricultural product logistics integration. The paper gave a general description of the model and conduct comparative experiments on its effectiveness. The paper found that the agricultural product logistics industry based on intelligent blockchain technology could achieved at least 40% of the additional revenue. After verification, the limitations of intelligent blockchain technology were also proposed and corresponding suggestions are given. At the end of this paper, the paper proposed that blockchain technology can realize the information visualization and traceability of the whole life cycle of products, which can effectively solve some new problems in the agricultural supply side structural reform and had broad application prospects.