Abstract Microplastics (MPs) have been characterised in South African rivers, lakes, and the marine environment, yet we know less about MPs in subterranean environments. In this study, we assessed MP pollution in the sediment, subsurface water, and resident freshwater amphipod, Sternophysinx species across six South African subterranean cave systems. We hypothesised that MP pollution will increase with human visitations and activities in and around selected subterranean caves. We found MPs in sediments, subsurface waters, and amphipod species ranging from 4.9 ± 1.2 to 25.0 ± 6.9 particles/kg–1, 2.7 ± 0.7 to 15.0 ± 1.7 particles/L–1 and 2.1 ± 0 to 9.8 ± 3.1 particles/dry mass, respectively, with polypropylene being the most abundant polymer according to FTIR analysis. White fibres were dominant in sediments and water samples, whereas blue fibres were dominant in amphipods. Our results supported the hypothesis that MPs densities were correlated with human visitation and activities in and around the caves. The presence of MPs in subterranean caves presents a biodiversity and conservation threat to endemic and understudied cave-dwelling aquatic invertebrates, due to MPs ability to be transferable between trophic levels causing physiological constraints.
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