Acyl Chain Region Research Articles

Effects of Ethanol on the Organization of Phosphocholine Lipid Bilayers

We have investigated the consequences of the addition of ethanol to aqueous solutions containing 100 nm diameter phosphocholine unilamellar vesicles. We have studied the effect of ethanol addition on both gel phase and fluid phase phospholipid bilayers of 1,2-dimyristoyl-sn-phosphatidylcholine (DMPC), using time-resolved fluorescence measurements of perylene incorporated into the vesicles. We observe an increase in the perylene rotational diffusion time constants for ethanol concentrations of ca. 0.6 M in both the gel phase (289 K) and the fluid phase (303 K), indicating a change in the bilayer interacyl chain spacing and/or organization. While the change in rotational diffusion behavior of perylene is seen for both phospholipid phases, the details of the change in chromophore dynamics are not the same for the two phases, likely due to the differing extents of disorder in the phospholipid acyl chain region at the two temperatures. These data provide insight into the effects of ethanol on the local environment of the probe in both gel phase and fluid phase lipid bilayers.

Structure and phase behavior of O-stearoylethanolamine: A combined calorimetric, spectroscopic and X-ray diffraction study

Recent studies show that O-acylethanolamines (OAEs), structural isomers of the putative stress-fighting lipids, namely N-acylethanolamines (NAEs), can be derived from NAEs and are present in biological membranes under physiological conditions. In view of this, we have synthesized O-stearoylethanolamine (OSEA) as a representative OAE and investigated its phase behavior and crystal structure. The thermotropic phase transitions of OSEA dispersed in water and in 150mM NaCl were characterized using calorimetric, spectroscopic, turbidimetric and X-ray diffraction studies. These studies have revealed that when dispersed in water OSEA undergoes a cooperative phase transition centered at 53.8 degrees C from an ordered gel phase to a micellar structure whereas in presence of 150mM NaCl the transition temperature increases to 55.8 degrees C and most likely the bilayer structure is retained above the phase transition. O-Stearoylethanolamine crystallized in the orthorhombic space group P2(1)2(1)2(1) with four symmetry-related molecules in the unit cell. Single-crystal X-ray diffraction studies show that OSEA molecules adopt a linear structure with all-trans conformation in the acyl chain region. The molecules are organized in a tail-to-tail fashion, similar to the arrangement in a bilayer membrane. These studies are relevant to understanding the role of salt on the phase properties of this new class of lipids.

STRUCTURAL EFFECTS OF VERAPAMIL ON CELL MEMBRANES AND MOLECULAR MODELS

ABSTRACT Verapamil is one of the frequently prescribed calcium channel blockers used in the treatment of hypertension and angina pectoris . Results of evaluations of the therapy have led to reports of toxic effects. This study presents several evidences that verapamil affects human cells. Scanning electron microscopy observations of intact human erythrocytes indicated that they underwent morphological alterations as increasing verapamil concentrations starting from 5 μM changed their discoid normal shape, and finally to hemolysis. Fluorescence spectroscopy on isolated unsealed human erythrocyte membranes confirmed these outcomes. In fact, the assays showed that verapamil induced a significant increase of the anisotropy parameters and a moderate one of the generalized polarization, indicative of enhanced order at the acyl chain and polar head regions of the erythrocyte membrane lipid bilayer. X-ray diffraction experiments on dimyristoylphosphatidylcholine and dimyristoylphosphatidylethanolamine bilayers, classes of the major phospholipids present in both outer and inner sides of the erythrocyte membrane, respectively showed that verapamil perturbed the polar head and acyl chain regions of both lipid bilayers. These interactions were found to be stronger with DMPC bilayers. On the other hand, human SH-SY5Y neuroblastoma cells incubated with verapamil suffered a sharp decrease of cell viability.

Charged and Aromatic Anchoring Amino Acids Affect the Orientation of Transmembrane Peptides: A Deuterium NMR Study

In integral proteins, the membrane-spanning segments are often flanked by aromatic and/or charged amino acids, which serve as anchoring residues, promoting protein-lipid interactions. These residues have specific polarity preferences, which are reflected in their typical immersion depths. Namely, tryptophan (W) is localized primarily to the carbonyl region of lipid acyl chains, while charged lysine (K) and arginine (R) prefer more polar regions. Although such patterns are widely recognized, little is known regarding the contributions of these residues for the orientations of transmembrane segments. Solid-state NMR spectroscopy offers a way to approach this problem. Peptides of the “WALP” family, GWW(LA)nLWWA, have served as useful models. Membrane-spanning proteins, nevertheless, typically contain more diverse sets of anchoring amino acids, which may act together to influence molecular geometry and orientation. To address these issues, we have designed the X2,22W5,19ALP23 peptides (acetyl-GXALW5(LA)6LW19LAXA-[ethanol]amide) to encompass two different anchor residues. In these peptides the inner anchor is kept constant (W), while the outer “anchor” (separated by a short Leu-Ala spacer) is varied to either W, K, R or the control residue G. Solid-state 2H NMR spectra were recorded for peptides having Ala CD3 groups in aligned bilayers of DLPC, DMPC and DOPC. The “Geometric Analysis of Labeled Alanines” provided a means to deduce the apparent average peptide orientations. Introduction of charged anchors (X = K or R) resulted in a 2-5° increase in the apparent tilt angle compared to X = G. Conversely, for X = W, the apparent tilt angle decreases 2-9°, accompanied by a significant change in the tilt direction.

Synthetic Fusion Peptides of Tick-Borne Encephalitis Virus as Models for Membrane Fusion

The fusion peptide of TBEV is a short segment of the envelope protein that mediates viral and host cell membrane fusion at acidic pH. Previous studies on the E protein have shown that mutations at L107 have an effect on fusogenic activity. Structural studies have also suggested that during the fusion process the E protein rearranges to form a trimer. In the present study, a number of short peptides were synthesized, and their structure/activity was examined: (1) monomers consisting of residues 93-113 of the wild-type E protein with Leu at position 107 (WT) and two mutants, namely, L107F and L107T; (2) a monomer consisting of residues 93-113 of the E protein with a C105A mutation (TFPmn); (3) a trimer consisting of three monomers described in (2), linked at the C-terminus via 1 Lys (TFPtr); (4) a monomer consisting of residues 93-113 of the E protein plus six additional Lys at the C-terminus; and (5) a trimer consisting of three monomers described in (3), linked via the side chain of the sixth lysine. The secondary structure content of all peptides was investigated using circular dichroism (CD). Approximately seven of the residues were in beta-strand conformation, in the presence of POPC/POPE/cholesterol. The structures did not depend on pH significantly. The fusogenicity of the peptides was measured by FRET and photon correlation spectroscopy. The data suggest that TFPtr is the most fusogenic at acidic pH and that the mutation from L107 to T reduces activity. Molecular dynamics simulations of WT, L107T, and L107F suggest that this reduction in activity may be related to the fact that the mutations disrupt trimer stability. Finally, tryptophan fluorescence experiments were used to localize the peptides in the membrane. It was found that WT, L107F, TFPmn, and TFPtr could penetrate better into the acyl chain region of the lipids than the other peptides tested. The implications of these results on the fusion mechanism of TBEV E protein will be presented.

Propyl paraben-induced changes in dipalmitoyl phosphatidylethanolamine vesicles

Abstract This article reports the influence of the preservative, propyl paraben (PPB), on the phase transition and dynamics of dipalmitoyl phosphatidylethanolamine (DPPE) vesicles both in multilamellar vesicular (MLV) and unilamellar vesicular (ULV) forms using DSC and (1H and 31P) NMR. DSC results indicate that the mechanism by which PPB interacts with DPPE vesicles is similar in both forms. Addition of PPB to DPPE dispersion results in lowering of the gel to liquid crystalline phase transition temperature (T m) and consequently increases DPPE headgroup fluidity. At high PPB concentration, additional transitions are observed whose intensity increases with increasing PPB concentration. DSC and NMR data indicate that the PPB molecules get intercalated between the DPPE headgroups as the polar group of the PPB molecules interacts with the polar group of PE, and the alkyl chain of PPB penetrates into the acyl chain region. The interesting finding with MLV is that the gel phase of DPPE in the presence of PPB, ...

Solution Structure and Membrane Interactions of the Antimicrobial Peptide Fallaxidin 4.1a: An NMR and QCM Study

The solution structure of fallaxidin 4.1a, a C-terminal amidated analogue of fallaxidin 4.1, a cationic antimicrobial peptide isolated from the amphibian Litoria fallax, has been determined by nuclear magnetic resonance (NMR). In zwitterionic dodecylphosphocholine (DPC) micelles, fallaxidin 4.1a adopted a partially helical structure with random coil characteristics. The flexibility of the structure may enhance the binding and penetration upon interaction with microbial membranes. Solid-state (31)P and (2)H NMR was used to investigate the effects of fallaxidin 4.1a on the dynamics of phospholipid membranes, using acyl chain deuterated zwitterionic dimyristoylphosphatidylcholine (DMPC-d(54)) and anionic dimyristoylphosphatidylglycerol (DMPG) multilamellar vesicles. In DMPC-d(54) vesicle bilayers, fallaxidin 4.1a caused a decrease in the (31)P chemical shift anisotropy (CSA), and a decrease in deuterium order parameters from the upper acyl chain region, indicating increased lipid motion about the phosphate headgroups. Conversely, for DMPC-d(54)/DMPG, two (31)P CSA were observed due to a lateral phase separation of the two lipids and/or differing headgroup orientations in the presence of fallaxidin 4.1a, with a preferential interaction with DMPG. Little effect on the deuterated acyl chain order parameters was observed in the d(54)-DMPC/DMPG model membranes. Real time quartz crystal microbalance analyses of fallaxidin 4.1a addition to DMPC and DMPC/DMPG supported lipid bilayers together with the NMR results indicated transmembrane pore formation in DMPC/DMPG membranes and peptide insertion followed by disruption at a threshold concentration in DMPC membranes. The different interactions observed with "mammalian" (DMPC) and "bacterial" (DMPC/DMPG) model membranes imply fallaxidin 4.1a may be a useful antimicrobial peptide, with preferential cytolytic activity toward prokaryotic organisms at low peptide concentrations (<5 microM).

Profiling of dynamics in protein–lipid–water systems: a time-resolved fluorescence study of a model membrane protein with the label BADAN at specific membrane depths

Profiles of lipid-water bilayer dynamics were determined from picosecond time-resolved fluorescence spectra of membrane-embedded BADAN-labeled M13 coat protein. For this purpose, the protein was labeled at seven key positions. This places the label at well-defined locations from the water phase to the center of the hydrophobic acyl chain region of a phospholipid model membrane, providing us with a nanoscale ruler to map membranes. Analysis of the time-resolved fluorescence spectroscopic data provides the characteristic time constant for the twisting motion of the BADAN label, which is sensitive to the local flexibility of the protein–lipid environment. In addition, we obtain information about the mobility of water molecules at the membrane–water interface. The results provide an unprecedented nanoscale profiling of the dynamics and distribution of water in membrane systems. This information gives clear evidence that the actual barrier of membranes for ions and aqueous solvents is located at the region of carbonyl groups of the acyl chains.

Constituent-Dependent Liposome Structure and Organization

We have used steady state and time-resolved fluorescence spectroscopy in concert with TEM to study organization and dynamics of molecules comprising liposomes, discoidal micelles, and spherical micelles. The lipid aggregates contained controlled amounts of lipids with headgroups modified with a thiol-terminated polyethylene glycol (thio-PEG lipids) and a small amount of 1-palmitoyl-2-(pyrene-1-yl)decanoyl-sn-glycero-3-phosphocholine (pyrene tethered DPPC), pyrene, or perylene as spectroscopic probes. The maximum diameter of the lipid aggregates was controlled by the polycarbonate filter pore size used in the extrusion process. The concentration of thio-PEG lipid in the aggregates determines not only the shape of the lipid assemblies but also the organization of the molecules within the assembly. Fluorescence lifetime and anisotropy decay data show that the immediate environment of pyrene tethered DPPC changes with the addition of thio-PEG lipid. In contrast, the dynamics of free chromophore (perylene) are insensitive to the addition of thio-PEG lipid. The addition of thio-PEG lipid to the lipid assembly produces changes in organization that are most pronounced in the lipid headgroup region. Reorientation dynamics of perylene show that the organization of the lipid bilayer acyl chain region is affected little by the addition of thio-PEG lipid and consequent macroscopic changes in the morphology of the lipid assemblies.

Deciphering Membrane Insertion of the Diphtheria Toxin T Domain by Specular Neutron Reflectometry and Solid-State NMR Spectroscopy

Insertion and translocation of soluble proteins into and across biological membranes are involved in many physiological and pathological processes, but remain poorly understood. Here, we describe the pH-dependent membrane insertion of the diphtheria toxin T domain in lipid bilayers by specular neutron reflectometry and solid-state NMR spectroscopy. We gained unprecedented structural resolution using contrast-variation techniques that allow us to propose a sequential model of the membrane-insertion process at angstrom resolution along the perpendicular axis of the membrane. At pH 6, the native tertiary structure of the T domain unfolds, allowing its binding to the membrane. The membrane-bound state is characterized by a localization of the C-terminal hydrophobic helices within the outer third of the cis fatty acyl-chain region, and these helices are oriented predominantly parallel to the plane of the membrane. In contrast, the amphiphilic N-terminal helices remain in the buffer, above the polar headgroups due to repulsive electrostatic interactions. At pH 4, repulsive interactions vanish; the N-terminal helices penetrate the headgroup region and are oriented parallel to the plane of the membrane. The C-terminal helices penetrate deeper into the bilayer and occupy about two thirds of the acyl-chain region. These helices do not adopt a transmembrane orientation. Interestingly, the T domain induces disorder in the surrounding phospholipids and creates a continuum of water molecules spanning the membrane. We propose that this local destabilization permeabilizes the lipid bilayer and facilitates the translocation of the catalytic domain across the membrane.

Comprehensive Analysis of Lipid Dynamics Variation with Lipid Composition and Hydration of Bicelles Using Nuclear Magnetic Resonance (NMR) Spectroscopy

Bicelles of various lipid/detergent ratios are commonly used in nuclear magnetic resonance (NMR) studies of membrane-associated molecules without the need to freeze the sample. While a decrease in the size (defined at a low temperature or by the q value) of a bicelle decreases its overall order parameter, the variation of lipid dynamics with a change in the lipid/detergent ratio is unknown. In this study, we report a thorough atomistic level analysis on the variation of lipid dynamics with the size and hydration level of bicelles composed of a phospholipid, 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC), and a detergent, 1,2-dihexanoyl-sn-glycero-3-phosphocholine (DHPC). Two-dimensional (2D) separated-local-field NMR experiments were performed on magnetically aligned bicelles to measure (1)H-(13)C dipolar couplings, which were used to determine order parameters at various (head-group, glycerol, and acyl chain) regions of lipids in the bilayer. From our analysis, we uncover the extreme sensitivity of the glycerol region to the motion of the bicelle, which can be attributed to the effect of viscosity because of an extensive network of hydrogen bonds. As such, the water-membrane interface region exhibits the highest order parameter values among all three regions of a lipid molecule. Our experimental results demonstrate that the laboratory-frame 2D proton-detected-local-field pulse sequence is well-suited for the accurate measurement of motionally averaged (or long-range) weak and multiple (1)H-(13)C dipolar couplings associated with a single carbon site at the natural abundance of (13)C nuclei.

Computational Studies of Texas Red−1,2-Dihexadecanoyl-sn-glycero-3-phosphoethanolamine—Model Building and Applications

Texas Red-1,2-dihexadecanoyl-sn-glycero-3-phosphoethanolamine (TR-DHPE) is a frequently used experimental tool in the study of lipid membranes by fluorescence microscopy techniques. Although it is usually incorporated at low concentration, several experimental studies suggest that fluorescent labels could alter the membrane's behavior. To investigate this possibility, we developed and validated a molecular dynamics model for TR-DHPE. The model was used to simulate TR-DHPE in 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC) bilayers of 127 lipids and 511 lipids. We also simulated a pure 128 DPPC bilayer under the same conditions and found that the results compared well with other simulations and experiments. Texas Red was found to reside in the upper acyl chain region of the bilayer. Coinciding with its position in the bilayer, we found that Texas Red decreased the upper acyl carbon order parameters of neighboring lipids. We analyzed area per lipid at varying distances from the Texas Red and discovered finite size effects in the 1:127 system. In both systems, the Texas Red bound to a DPPC lipid. The model we have developed should also be useful for other biomolecular simulations which try to mimic experimental systems.

Interactions of Lipopolysaccharide and Polymyxin Studied by NMR Spectroscopy

In the light of occurrence of bacterial strains with multiple resistances against most antibiotics, antimicrobial peptides that interact with the outer layer of Gram-negative bacteria, such as polymyxin (PMX), have recently received increased attention. Here we present a study of the interactions of PMX-B, -E, and -M with lipopolysaccharide (LPS) from a deep rough mutant strain of Escherichia coli. A method for efficient purification of biosynthetically produced LPS using reversed-phase high-performance liquid chromatography in combination with ternary solvent mixtures was developed. LPS was incorporated into a membrane model, dodecylphosphocholine micelles, and its interaction with polymyxins was studied by heteronuclear NMR spectroscopy. Data from chemical shift mapping using isotope-labeled LPS or labeled polymyxin, as well as from isotope-filtered nuclear Overhauser effect spectroscopy experiments, reveal the mode of interaction of LPS with polymyxins. Using molecular dynamics calculations the complex of LPS with PMX-B in the presence of dodecylphosphocholine micelles was modeled using restraints derived from chemical shift mapping data and intermolecular nuclear Overhauser effects. In the modeled complex the macrocycle of PMX is centered around the phosphate group at GlcN-B, and additional contacts from polar side chains are formed to GlcN-A and Kdo-C, whereas hydrophobic side chains penetrate the acyl-chain region.

Influence of α-helical Transmembrane Peptides on the Affinity of Sterols for Phospholipid Bilayers

It is well known that lipids can segregate laterally into nanoscopic domains or different phases. Yet very little is known about proteins can influence the lateral organization in cellular membranes. As most biomembranes contain relatively high concentrations of transmembrane proteins it is important to learn more about how lipid-protein interplay affects the lateral organization in membranes. Cholesterol is thought to have an important role in lateral organization of eukaryotic cell membranes. As cholesterol also has been implicated to take part in the sorting of cellular transmembrane proteins it is a good starting point to determine how transmembrane proteins influence the lateral sorting of cholesterol in phospholipid bilayers. Insight into this can be obtained by studying how cholesterol interacts with bilayer membranes of different composition in the presence of different transmembrane peptides, mimicking the transmembrane helices of proteins. For this purpose an assay, in which the partitioning of the fluorescent cholesterol analogue cholestatrienol (CTL) between large unilamellar vesicles (LUVs) and methyl-β-cyclodextrin (CD) can be measured, has been developed. The partition assay showed that CTL partition preferentially into fluid phospholipid bilayers with a more ordered acyl chain region, as has been observed previously with cholesterol. It is known that proteins can decrease or increase the order in lipid bilayers and that the nature of this effect is dependent on both the structure of the protein and the composition of the bilayer. In order to assess how such protein induced order changes in the lipid bilayer affects cholesterol partitioning we have measured CTL's affinity for bilayers with varying lipid composition and containing various transmembrane peptides.

Human erythrocytes and molecular models of cell membranes are affected in vitro by Balbisia peduncularis (Amancay) extracts

Balbisia peduncularis, also known as “Amancay”, is a plant of the Ledocarpaceae family that can be found in the Atacama Desert in northern Chile. Infusions of the plant have long being used in traditional herbal medicine. Its chemical composition indicates the presence of flavonoids, which have antioxidant properties. Aqueous extracts from its stems were prepared to induce their interaction with human erythrocytes and their membrane models in order to elucidate whether this rare and unstudied plant produced perturbations to cell membranes. Scanning electron microscopy (SEM) of intact human red blood cells showed that the extract changed the normal erythrocytes morphology as a function of its concentration, first inducing echinocytes, and then stomatocytes and spherocytes. According to the bilayer couple hypothesis, the shape changes indicated that the flavonoids were first located in the outer monolayer of the erythrocyte membrane, and at the highest assayed concentration in both monolayers. The results obtained by fluorescence spectroscopy measurements of isolated unsealed human erythrocytes (IUM), of unilamellar vesicles (LUV) of dimyristoylphosphatidylcholine (DMPC), and by X-ray diffraction of DMPC and dimyristoylphosphatidylethanolamine (DMPE) multilayers, confirmed this conclusion. In fact, they showed that the plant aqueous extract molecules were located in both the hydrophilic polar head and in the hydrophobic acyl chain regions of the lipid bilayers. As a consequence, perturbations of the phospholipid bilayer packing arrangement were produced.

Structure of membrane-bound α-synuclein from site-directed spin labeling and computational refinement

alpha-Synuclein is known to play a causative role in Parkinson disease. Although its physiological functions are not fully understood, alpha-synuclein has been shown to interact with synaptic vesicles and modulate neurotransmitter release. However, the structure of its physiologically relevant membrane-bound state remains unknown. Here we developed a site-directed spin labeling and EPR-based approach for determining the structure of alpha-synuclein bound to a lipid bilayer. Continuous-wave EPR was used to assign local secondary structure and to determine the membrane immersion depth of lipid-exposed residues, whereas pulsed EPR was used to map long-range distances. The structure of alpha-synuclein was built and refined by using simulated annealing molecular dynamics restrained by the immersion depths and distances. We found that alpha-synuclein forms an extended, curved alpha-helical structure that is over 90 aa in length. The monomeric helix has a superhelical twist similar to that of right-handed coiled-coils which, like alpha-synuclein, contain 11-aa repeats, but which are soluble, oligomeric proteins (rmsd = 0.82 A). The alpha-synuclein helix extends parallel to the curved membrane in a manner that allows conserved Lys and Glu residues to interact with the zwitterionic headgroups, while uncharged residues penetrate into the acyl chain region. This structural arrangement is significantly different from that of alpha-synuclein in the presence of the commonly used membrane-mimetic detergent SDS, which induces the formation of two antiparallel helices. Our structural analysis emphasizes the importance of studying membrane protein structure in a bilayer environment.

Interrogating the role of liposome size in mediating the dynamics of a chromophore in the acyl chain region of a phospholipid bilayer

We have examined the temperature-dependent reorientation dynamics of perylene imbedded in bilayers of 1,2-dimyristoyl- sn-phosphatidylcholine (DMPC), where the bilayers exist in the form of unilamellar vesicles. Previous work using 100-nm diameter DMPC vesicles has shown that the phase transition from the gel phase to the fluid phase can be detected using the reorientation dynamics of perylene. In this work we explore the vesicle size dependence of the perylene reorientation dynamics in DMPC vesicles. The size of the vesicles is determined by extrusion and the reorientation dynamics of perylene are measured as a function of vesicle size between 100-nm and 5-μm diameter. We find that, while the phase transition for DMPC is seen in smaller vesicles, perylene becomes insensitive to the phase transition for vesicles larger than ca. 800-nm diameter. We also find a discontinuous change in perylene reorientation dynamics with increasing vesicle size, and we consider this result in the context of the location of perylene within the bilayer.

Human cells and cell membrane molecular models are affected in vitro by chlorpromazine

This study presents evidence that chlorpromazine (CPZ) affects human cells and cell membrane molecular models. Human SH-SY5Y neuroblastoma cells incubated with 0.1 mM CPZ suffered a decrease of cell viability. On the other hand, phase contrast microscopy observations of human erythrocytes indicated that they underwent a morphological alteration as 1 μM CPZ changed their discoid normal shape to stomatocytes, and to hemolysis with 1 mM CPZ. X-ray diffraction experiments performed on dimyristoylphosphatidylcholine (DMPC) and dimyristoylphosphatidylethanolamine (DMPE) bilayers, classes of the major phospholipids present in the outer and inner sides of the erythrocyte membrane, respectively showed that CPZ disordered the polar head and acyl chain regions of both DMPC and DMPE, where these interactions were stronger with DMPC bilayers. Fluorescence spectroscopy on DMPC LUV at 18 °C confirmed these results. In fact, the assays showed that CPZ induced a significant reduction of their generalized polarization (GP) and anisotropy ( r) values, indicative of enhanced disorder at the polar head and acyl chain regions of the DMPC lipid bilayer.

Formation of a High Affinity Lipid-Binding Intermediate during the Early Aggregation Phase of α-Synuclein

The alpha-synuclein (alpha-syn) protein is clearly implicated in Parkinson's disease (PD). Mutations or triplication of the alpha-syn gene leads to early onset PD, possibly by accelerating alpha-syn oligomerization. alpha-syn interacts with lipids, and this membrane binding activity may relate to its toxic activity. To understand how the alpha-syn aggregation state affects its lipid binding activity we used surface plasmon resonance to study the interaction of wild-type and mutant alpha-syn with a charged phospholipid membrane, as a function of its aggregation state. Apparent dissociation constants for alpha-syn indicated that an intermediate species, present during the lag phase of amyloid formation, binds with an increased affinity to the membrane surface. Formation of this species was dependent upon the rate of fibril formation. Fluorescence anisotropy studies indicate that only upon the formation of amyloid material can alpha-syn perturb the acyl-chain region of the lipid bilayer. Circular dichroism spectroscopy showed that upon aging, both wild-type and mutant alpha-syn lose their ability to form lipid-bound alpha-helical species once they become fibrillar. These results indicate that alpha-syn forms a high affinity lipid binding intermediate species during fibril formation. Oligomeric alpha-syn is known to be toxic, and it is feasible that the high affinity binding species described here may correspond to a toxic species involved in PD.

Distribution of neutral prilocaine in a phospholipid bilayer: Insights from molecular dynamics simulations

AbstractIn this work, we report a 20‐ns constant pressure molecular dynamics simulation of prilocaine (PLC), an amine–amide local anesthetic, in a hydrated liquid crystal bilayer of 1‐palmitoyl‐2‐oleoyl‐sn‐glycero‐3‐phosphatidylcholine. The partition of PLC induces the lateral expansion of the bilayer and a concomitant contraction in its thickness. PLC molecules are preferentially found in the hydrophobic acyl chains region, with a maximum probability at ∼12 Å from the center of the bilayer (between the C(4) and C(5) methylene groups). A decrease in the acyl chain segmental order parameter, |SCD|, compared to neat bilayers, is found, in good agreement with experimental 2H‐NMR studies. The decrease in |SCD| induced by PLC is attributed to a larger accessible volume per lipid in the acyl chain region. © 2008 Wiley Periodicals, Inc. Int J Quantum Chem, 2008