Palladium-based catalysts with equably distributions of surface functionalities are synthesized by anchoring palladium nanoparticles onto N-doped carbon layers stabilized by mildly acidic platelet ZrSBA-15 framework with short mesochannels. The catalysts were fully characterized by X-ray diffraction, N2 adsorption-desorption isotherms, Fourier-transform infrared spectroscopy, X-ray photoelectron spectroscopy, scanning electron microscopy and transmission electron microscopy. Simultaneously, the Pd–NC–ZS catalysts exhibited the expectable activity in aerobic oxidation of benzyl alcohol with 82% conversion and absolute selectivity to benzaldehyde. Inappreciable loss in catalytic performance under solvent- and base-free conditions after ten times recycle demonstrated that there was strong interaction between palladium nanoparticles and the modified framework. Namely, a synergistic effect can be certified due to the surface acidic sites of ZrSBA-15 and N-doped carbon layers, which could strengthen the interaction between palladium nanoparticles and support, thus facilitating the anchoring and stabilization of palladium nanoparticles onto the pore walls of the NC–ZS.