Aim This study aims to synthesise selenium nanoparticles (SeNPs) using extracts from Citrus sinensis peel (CSP), Millettia pinnata Leaf (MPL), and Acacia auriculiformis bark (AAB) as eco-friendly reducing agents. It seeks to compare the effectiveness of these plant extracts in the production of SeNPsand evaluate the antioxidant activities of the synthesised nanoparticles, establishing a link between the phytochemical constituents of the extracts and the antioxidant capacity of SeNPs for their potential applications in drug development and environmental sustainability. Introduction Nanotechnology offers innovative solutions in various fields, including medicine, environmental science, and materials engineering. SeNPs are of particular interest due to their unique properties and potential applications. The methods for synthesizing nanoparticles often involve hazardous chemicals, posing risks to the environment and human health. In response, green synthesis methods utilizing plant extracts have emerged as a sustainable alternative. This study focuses on utilizing CSP, MPL, and AAB extracts, rich in natural reducing agents such as flavonoids and phenolic acids, for the eco-friendly synthesis of SeNPs. These plant sources are chosen based on their known phytochemical profiles and potential antioxidant activities, and we aim to explore the correlation between the extracts' phytochemical composition and the antioxidant capabilities of the synthesised SeNPs. Methods SeNPs were synthesised using aqueous extracts of CSP, MPL, and AAB through a reduction process, in which selenium ions (Se4+) are reduced to elemental selenium. The presence of SeNPs was first visually monitored by colour change and then confirmed through UV-Vis spectroscopy and Fourier transform infrared (FTIR) spectroscopy analyses. The antioxidant activity of the synthesised SeNPs was assessed using the 1,1-diphenyl-2-picryl hydroxyl (DPPH) radical scavenging assay and the efficacy of SeNPs synthesised from different plant extracts was compared. Results The UV-Vis spectral analysis indicated a successful synthesis of SeNPs, as evidenced by the characteristic absorption peaks. The FTIR analysis confirmed the presence of organic molecules derived from the plant components on the outer layer of SeNPs, suggesting successful capping and stabilization of nanoparticles by phytochemicals in the extracts. Among the three types of SeNPs, those synthesised using Citrus sinensis peel extract (CSPE) exhibited the highest DPPH radical scavenging activity, indicating superior antioxidant properties compared to SeNPs synthesised from Millettia pinnata leaf extract (MPLE) and Acacia auriculiformis bark extract (AABE). This suggests that the antioxidant capacity of SeNPs is significantly influenced by the phytochemical composition of the plant extract used for synthesis. Conclusion The study highlights the potential of CSPE as an effective natural source for synthesising antioxidant-rich SeNPs and underscores the importance of green synthesis approaches in producing environmentally friendly and biologically active nanomaterials.