This Perspective series seeks to summarize the present concepts regarding the biological processes that mediate intrinsic and innate host defense against microbial invasion of the lung. From an evolutionary standpoint, the requirements for an extensive gas exchange region that comes in direct contact with inhaled particles and pathogens present a formidable challenge that has been countered by the layering and intersection of several intrinsic defense systems. These systems, detailed in the accompanying articles, maintain pulmonary form and function required for ventilation by means of structural, mechanical, chemical, and cellular strategies, as well as innate and acquired host defenses. The epithelial barrier itself represents a first line of defense against pathogens, and its effectiveness is greatly enhanced by fluid homeostasis and mucociliary clearance. As discussed by Knowles and Boucher in this series, these mechanisms protect the epithelium and physically remove inhaled pathogens from the lung. Additional protection comes from polypeptide mediators of the innate host defense, such as the defensins and other antibiotic peptides reviewed by Ganz in this series, and the collectin family, considered by McCormack and Whitsett. Professional phagocytes also play their part in host defense in this tissue, in part by responding to molecules found on the surface of common pathogenic microbes. Finally, the cytokine and chemokine pathways that cooperate with host defense polypeptides to mediate initial host defenses by phagocytes also orchestrate tissue repair and subsequent acquired immune responses following infection, as discussed by Strieter et al. The interplay of these various mechanisms is depicted in Figure Figure11. Figure 1 The sterility of the respiratory tract is maintained by the concerted actions of the epithelial barrier, innate defense molecules, and responses of both the epithelium and professional phagocytes that remove pathogens and their products from the lung. ... The concerted effects of mechanical, innate, and acquired host defense systems serve to recognize, localize, kill, and remove pathogens to maintain sterility of pulmonary tissues and the host. In general, pathogens are cleared from the lung without persistent or robust inflammation, thus protecting its inherent structure and maintaining its function following exposure to microbes. It is the failure of various arms of the host defense systems that allows local or systemic infection and destruction of lung tissue that are frequently the basis of morbidity and mortality from common lung diseases, whether related to genetic or environmental disease processes. Deficient or uncontrolled host defenses and inflammation underlie some of the most common pulmonary disorders — chronic obstructive pulmonary disease, cystic fibrosis, acute and chronic pneumonia, asthma, emphysema, and bronchopulmonary dysplasia.