Acid Head Groups Research Articles

Supramolecular self-assembly of naphthalene diimide bolaamphiphile with biologically important amines: Cyclam, spermine and melamine

A rigid bolaamphiphile molecule (NDI-1) was synthesized consisting of a naphthalenediimide unit with glutamic acid head groups. Co-assembly of NDI-1 with cyclam, spermine and melamine bearing amine functional groups is studied herein giving significantly different microstructures. NDI-1 was designed to induce geometrically favourable hydrogen bonding with its counterpart molecules in the co-assembly to trigger supramolecular micro- and nano-architectures formation. The interaction between the bolaamphiphile NDI-1 and biologically important amines such as cyclam, spermine and melamine was investigated by UV–vis and fluorescence emission spectroscopy and the nanostructure morphology was studied using scanning electron microscopy. It was found that the co-assembly of NDI-1 with cyclam resulted in fractal-like morphology. Co-assembly of NDI-1 with spermine yielded a crystalline microstructure based on an α-helix molecular arrangement changed into a quasicrystal structure. Self-assembly of NDI-1 in the presence of melamine resulted in a highly crystalline needle-like morphology. The nucleation and growth of the nanostructures were tuned by analytes into distinct classes. Such changes in morphology are significant to the fabrication of various nanomaterials via non-covalent interactions with distinct properties.

Fusion of Bipolar Tetraether Lipid Membranes Without Enhanced Leakage of Small Molecules

A major challenge in liposomal research is to minimize the leakage of encapsulated cargo from either uncontrolled passive permeability across the liposomal membrane or upon fusion with other membranes. We previously showed that liposomes made from pure Archaea-inspired bipolar tetraether lipids exhibit exceptionally low permeability of encapsulated small molecules due to their capability to form more tightly packed membranes compared to typical monopolar lipids. Here, we demonstrate that liposomes made of synthetic bipolar tetraether lipids can also undergo membrane fusion, which is commonly accompanied by content leakage of liposomes when using typical bilayer-forming lipids. Importantly, we demonstrate calcium-mediated fusion events between liposome made of glycerolmonoalkyl glycerol tetraether lipids with phosphatidic acid headgroups (GMGTPA) occur without liposome content release, which contrasts with liposomes made of bilayer-forming EggPA lipids that displayed ~80% of content release under the same fusogenic conditions. NMR spectroscopy studies of a deuterated analog of GMGTPA lipids reveal the presence of multiple rigid and dynamic conformations, which provide evidence for the possibility of these lipids to form intermediate states typically associated with membrane fusion events. The results support that biomimetic GMGT lipids possess several attractive properties (e.g., low permeability and non-leaky fusion capability) for further development in liposome-based technologies.

Nanoparticle charging with mixed reverse micelles in apolar media

The charging of colloidal particles using mixed surfactants in apolar media is investigated. Previous work has shown that one can predict the sign and magnitude of particle charge by comparing the acid-base properties of an oil-soluble surfactant to the acid-base properties of a specific particle. The present work sought to tune the acid-base properties by using mixed surfactants. Unexpected mineral oxide particle charging results were obtained however, from mixing the acidic surfactant sorbitan monooleate (SPAN 80), with the basic surfactant polyisobutylene succinimide (OLOA 11000), requiring further investigation into the mixed reverse co-micelle particle charging mechanism. Conductometric titrations and small-angle neutron and x-ray scattering measurements showed that the surfactant mixtures formed spherical reverse co-micelles. Quartz crystal microbalance adsorption measurements demonstrated that both surfactants can adsorb to the particle surface. Lastly, electrophoretic mobility measurements showed that the surfactant mixture produced negative particle charging for nearly all surfactant ratios, and a greater magnitude of negative charging than that produced by the OLOA 11000 surfactant alone. It was discovered that in the mixed surfactant system studied, the basic surfactant would charge the hydroxyl groups on both the oxide surface, and the adsorbed acidic surfactant head groups. The results showed that particle charging behavior in apolar media using mixed micelles requires knowledge beyond that for the individual surfactants and their proportions in the mixture.

Lipoaminoacids Enzyme-Based Production and Application as Gene Delivery Vectors

Biosurfactant compounds have been studied in many applications, including biomedical, food, cosmetic, agriculture, and bioremediation areas, mainly due to their low toxicity, high biodegradability, and multifunctionality. Among biosurfactants, the lipoplexes of lipoaminoacids play a key role in medical and pharmaceutical fields. Lipoaminoacids (LAAs) are amino acid-based surfactants that are obtained from the condensation reaction of natural origin amino acids with fatty acids or fatty acid derivatives. LAA can be produced by biocatalysis as an alternative to chemical synthesis and thus become very attractive from both the biomedical and the environmental perspectives. Gemini LAAs, which are made of two hydrophobic chains and two amino acid head groups per molecule and linked by a spacer at the level of the amino acid residues, are promising candidates as both drug and gene delivery and protein disassembly agents. Gemini LAA usually show lower critical micelle concentration, interact more efficiently with proteins, and are better solubilising agents for hydrophobic drugs when compared to their monomeric counterparts due to their dimeric structure. A clinically relevant human gene therapy vector must overcome or avoid detect and silence foreign or misplaced DNA whilst delivering sustained levels of therapeutic gene product. Many non-viral DNA vectors trigger these defence mechanisms, being subsequently destroyed or rendered silent. The development of safe and persistently expressing DNA vectors is a crucial prerequisite for a successful clinical application, and it one of the main strategic tasks of non-viral gene therapy research.

Arginine-Induced Self-Assembly of Protoporphyrin to Obtain Effective Photocatalysts in Aqueous Media Under Visible Light.

The fabrication of controlled supramolecular nanostructures via self-assembly of protoporphyrin IX (PPIX) was studied with enantiomerically pure l-arginine and d-arginine, and we have shown that stoichiometry controlled the morphology formed. The nanostructure morphology was mainly influenced by the delicate balance of π-π stacking interactions between PPIX cores, as well as H-bonding between the deprotonated acidic head group of PPIX with the guanidine head group of arginine. PPIX self-assembled with l-/d-arginine to create rose-like nanoflower structures for four equivalents of arginine that were 5–10 μm in length and 1–4 μm diameter. We employed UV-vis, fluorescence spectroscopy, scanning electron microscopy (SEM), X-ray diffraction (XRD), dynamic light scattering (DLS) and Fourier transform infrared spectroscopy (FT-IR) techniques to characterize the resulting self-assembled nanostructures. Furthermore, we investigated the catalytic activity of PPIX and arginine co-assembled materials. The fabricated PPIX–arginine nanostructure showed high enhancement of photocatalytic activity through degradation of rhodamine B (RhB) with a decrease in dye concentration of around 78–80% under simulated visible radiation.

Fat SIRAH: Coarse-Grained Phospholipids To Explore Membrane–Protein Dynamics

The capability to handle highly heterogeneous molecular assemblies in a consistent manner is among the greatest challenges faced when deriving simulation parameters. This is particularly the case for coarse-grained (CG) simulations in which chemical functional groups are lumped into effective interaction centers for which transferability between different chemical environments is not guaranteed. Here, we introduce the parametrization of a set of CG phospholipids compatible with the latest version of the SIRAH force field for proteins. The newly introduced lipid species include different acylic chain lengths and partial unsaturation, as well as polar and acidic head groups that show a very good reproduction of structural membrane determinants, such as areas per lipid, thickness, order parameter, etc., and their dependence with temperature. Simulation of membrane proteins showed unprecedented accuracy in the unbiased description of the thickness-dependent membrane-protein orientation in systems where this information is experimentally available (namely, the SarcoEndoplasmic Reticulum Calcium-SERCA-pump and its regulator Phospholamban). The interactions that lead to this faithful reproduction can be traced down to the single amino acid-lipid interaction level and show full agreement with biochemical data present in the literature. Finally, the present parametrization is implemented in the GROMACS and AMBER simulation packages facilitating its use by a wide portion of the biocomputing community.

Decomposition kinetics of perfluorinated sulfonic acids

Perfluorooctanesulfonic acid (PFOS) is a widespread and persistent pollutant of concern to human health and the environment. Although incineration is often used to treat material contaminated with PFOS and related per- and polyfluoroalkyl substances (PFAS), little is known about the precise chemical mechanism for the thermal decomposition of these substances of concern. Here, we present the first study of the thermal decomposition kinetics of PFOS and related perfluorinated acids, using computational chemistry and reaction rate theory methods. We discover that the preferred channel for PFOS decomposition is via an α-sultone that spontaneously decomposes to form perfluorooctanal and SO2. At 1000 K the halflife for PFOS is predicted to be 0.2 s, decreasing sharply as temperature increases further. These results show that the acid headgroup in PFOS can be efficiently destroyed in incinerators operating at relatively modest temperatures. The new insights provided into the exact decomposition mechanism and kinetics of PFOS will help to improve remediation technologies actively under development.

Preparative hydrophilic interaction liquid chromatography of acidic organofluorophosphates formed in lithium ion battery electrolytes

The expansion of lithium ion battery (LIB) application is accompanied by the growth of battery pack sizes. This progression emphasizes the consideration of electrolyte safety as well as environmental aspects in case of abuse, accident, or recycling. Hexafluorophosphate is one of the most commonly used conducting salt anions in electrolytes. It has great potential to degrade to various acidic and non-acidic organo(fluoro)phosphates with presence of water and during battery cell operation. Consequently, toxicological investigation on these organo(fluoro)phosphates has emerged because they either have structural similarities as chemical warfare agents or play a widespread physiological role as phosphates in the human body. This circumstance underlines the need of isolated examination of these compounds for safety assessment. In this work, we used hydrophilic interaction liquid chromatography for the extraction of acidic organofluorophosphates from thermally aged LIB electrolytes. The developed two-step fractionation method provided high separation selectivity towards acidic head groups, which allowed the separation of undesired matrix and target compounds. These findings facilitate isolated toxicological investigations on organofluorophosphates that are beneficial for environmental and safety research, the battery cell industry, and human safety surveillance in regard to aged LIB electrolytes.

Novel two-chain fatty acid-based lipids for development of vancomycin pH-responsive liposomes against Staphylococcus aureus and methicillin-resistant Staphylococcus aureus (MRSA)

The development of bacterial resistance against antibiotics is attributed to poor localisation of lethal antibiotic dose at the infection site. This study reports on the synthesis and use of novel two-chain fatty acid-based lipids (FAL) containing amino acid head groups in the formulation of pH-responsive liposomes for the targeted delivery of vancomycin (VAN). The formulated liposomes were characterised for their size, polydispersity index (PDI), surface charge and morphology. The drug-loading capacity, drug release, cell viability, and in vitro and in vivo efficacy of the formulations were investigated. A sustained VAN release profile was observed and in vitro antibacterial studies against S. aureus and MRSA showed superior and prolonged activity over 72 h at both pH 7.4 and 6.0. Enhanced antibacterial activity at pH 6.0 was observed for the DOAPA-VAN-Lipo and DLAPA-VAN-Lipo formulations. Flow cytometry studies indicated a high killing rate of MRSA cells using DOAPA-VN-Lipo (71.98%) and DLAPA-VN-Lipo (73.32%). In vivo studies showed reduced MRSA recovered from mice treated with formulations by four- and two-folds lower than bare VN treated mice, respectively. The targeted delivery of VAN can be improved by novel pH-responsive liposomes from the two-chain (FAL) designed in this study.

Development of an N-Acyl Amino Acid That Selectively Inhibits the Glycine Transporter 2 To Produce Analgesia in a Rat Model of Chronic Pain.

Inhibitors that target the glycine transporter 2, GlyT2, show promise as analgesics, but may be limited by their toxicity through complete or irreversible binding. Acyl-glycine inhibitors, however, are selective for GlyT2 and have been shown to provide analgesia in animal models of pain with minimal side effects, but are comparatively weak GlyT2 inhibitors. Here, we modify the simple acyl-glycine by synthesizing lipid analogues with a range of amino acid head groups in both l- and d-configurations, to produce nanomolar affinity, selective GlyT2 inhibitors. The potent inhibitor oleoyl-d-lysine (33) is also resistant to degradation in both human and rat plasma and liver microsomes, and is rapidly absorbed following an intraperitoneal injection to rats and readily crosses the blood-brain barrier. We demonstrate that 33 provides greater analgesia at lower doses, and does not possess the severe side effects of the very slowly reversible GlyT2 inhibitor, ORG25543 (2).

Synthesis and Biochemical Evaluation of Lid-Open D-Amino Acid Oxidase Inhibitors

Most of the known inhibitors of d-amino acid oxidase (DAAO) are small polar molecules recognized by the active site of the enzyme. More recently a new class of DAAO inhibitors has been disclosed that interacts with loop 218−224 at the top of the binding pocket. These compounds have a significantly larger size and more beneficial physicochemical properties than most reported DAAO inhibitors, however, their structure-activity relationship is poorly explored. Here we report the synthesis and evaluation of this type of DAAO inhibitors that open the lid over the active site of DAAO. In order to collect relevant SAR data we varied two distinct parts of the inhibitors. A systematic variation of the pendant aromatic substituents according to the Topliss scheme resulted in DAAO inhibitors with low nanomolar activity. The activity showed low sensitivity to the substituents investigated. The variation of the linker connecting the pendant aromatic moiety and the acidic headgroup revealed that the interactions of the linker with the enzyme were crucial for achieving significant inhibitory activity. Structures and activities were analyzed based on available X-ray structures of the complexes. Our findings might support the design of drug-like DAAO inhibitors with advantageous physicochemical properties and ADME profile.

Friction and Adsorption Properties of Oleic Acid-Based Gemini Amphiphile at Silica/Ester Oil Interfaces.

We characterized the friction and adsorption properties of an oleic acid-based gemini amphiphile having two carboxylic acid headgroups. We employed silica as a solid material, and diethyl sebacate and bis (2-ethylhexyl) sebacate as polar ester oils. Oleic acid and stearic acid were used as comparative amphiphilic materials. These amphiphiles were soluble in the ester oils, and the solubility of the gemini amphiphile was lower than that of the other two amphiphiles. Quartz crystal microbalance with dissipation monitoring measurements suggested that the gemini amphiphile had greater adsorption capability than the two comparative amphiphiles. The greater adsorption density of the gemini amphiphile resulted in the formation of a rigid interfacial film, as suggested by the normal force curves obtained by atomic force microscopy (AFM). We assessed the friction property of these systems using a ball-on-plate-type friction analyzer and by friction-mode AFM (friction force curve). These measurements confirmed that the gemini amphiphile had a smaller kinetic friction coefficient than that of the other two amphiphiles. These results suggest the potential of the gemini amphiphile as a friction modifier in polar oils.

Physicochemical Properties of Noncovalently Constructed Sugar-Based Pseudogemini Surfactants: Evaluation of Linker Length Influence

Natural renewable glucose or lactose upon reaction with dodecylamine has been converted into N-dodecylglucosylamine or N-dodecyllactosylamine, which upon acid–alkali reaction with dicarboxylic acid (HOOC(CH2)n-2COOH, n = 3,4,5,6,8) gives a series of sugar-based pseudogemini surfactants (G-n, L-n, respectively). Some physicochemical properties such as the critical micelle concentration (CMC), equilibrium surface tension at the CMC (γCMC), effectiveness (πCMC), efficiency (pC20), maximum surface excess (Γmax), minimum surface area (Amin), counterion binding of micelles (β), and the changes of standard Gibbs free energy (ΔGm0), enthalpy (ΔHm0) and entropy (ΔSm0) for processes of micellization in the range 298.15 K to 328.15 K have been evaluated by surface tension and electroconductometry methods in aqueous solutions of these pseudogemini surfactants. The results revealed that most of the above properties depend on dicarboxylic acid linker length and headgroup saccharide size. These findings help with unders...

Discovery of a GPR40 Superagonist: The Impact of Aryl Propionic Acid α-Fluorination.

GPR40 is a G-protein-coupled receptor which mediates fatty acid-induced glucose-stimulated insulin secretion from pancreatic beta cells and incretion release from enteroendocrine cells of the small intestine. GPR40 full agonists exhibit superior glucose lowering compared to partial agonists in preclinical species due to increased insulin and GLP-1 secretion, with the added benefit of promoting weight loss. In our search for potent GPR40 full agonists, we discovered a superagonist which displayed excellent in vitro potency and superior efficacy in the Gαs-mediated signaling pathway. Most synthetic GPR40 agonists have a carboxylic acid headgroup, which may cause idiosyncratic toxicities, including drug-induced-liver-injury (DILI). With a methyl group and a fluorine atom substituted at the α-C of the carboxylic acid group, 19 is not only highly efficacious in lowering glucose and body weight in rodent models but also has a low DILI risk due to its stable acylglucuronide metabolite.

Charging of Carboxylic Acid Monolayers with Monovalent Ions at Low Ionic Strengths: Molecular Insight Revealed by Vibrational Sum Frequency Spectroscopy

The charging of arachidic acid Langmuir monolayers as a function of subphase pH and monovalent ion concentration below 100 mM was investigated using vibrational sum frequency spectroscopy. Molecular information was obtained by targeting the vibrational modes of the carboxylic acid headgroups, alkyl chains, and water molecules in the immediate surface and diffuse double layers. The surface charge in the monolayer was experimentally determined by monitoring the hydrated carboxylate stretching modes. The charging behavior was found to be in excellent agreement with that predicted by Gouy–Chapman theory using a thermodynamic pKa of 5.1 ± 0.2. This resulted in an apparent pKa of ∼10.8 when the only ions present in solution were those associated with adjusting the pH. Water molecules with a preferred orientation in the immediate surface region were found to primarily interact with the uncharged carboxylic acid moiety, decreasing in number as the monolayer further deprotonated. Contributions from water molecules...

A combined lipidomic and 16S rRNA gene amplicon sequencing approach reveals archaeal sources of intact polar lipids in the stratified Black Sea water column.

Archaea are important players in marine biogeochemical cycles, and their membrane lipids are useful biomarkers in environmental and geobiological studies. However, many archaeal groups remain uncultured and their lipid composition unknown. Here, we aim to expand the knowledge on archaeal lipid biomarkers and determine the potential sources of those lipids in the water column of the euxinic Black Sea. The archaeal community was evaluated by 16S rRNA gene amplicon sequencing and by quantitative PCR. The archaeal intact polar lipids (IPLs) were investigated by ultra‐high‐pressure liquid chromatography coupled to high‐resolution mass spectrometry. Our study revealed both a complex archaeal community and large changes with water depth in the IPL assemblages. In the oxic/upper suboxic waters (<105 m), the archaeal community was dominated by marine group (MG) I Thaumarchaeota, coinciding with a higher relative abundance of hexose phosphohexose crenarchaeol, a known marker for Thaumarchaeota. In the suboxic waters (80–110 m), MGI Nitrosopumilus sp. dominated and produced predominantly monohexose glycerol dibiphytanyl glycerol tetraethers (GDGTs) and hydroxy‐GDGTs. Two clades of MGII Euryarchaeota were present in the oxic and upper suboxic zones in much lower abundances, preventing the detection of their specific IPLs. In the deep sulfidic waters (>110 m), archaea belonging to the DPANN Woesearchaeota, Bathyarchaeota, and ANME‐1b clades dominated. Correlation analyses suggest that the IPLs GDGT‐0, GDGT‐1, and GDGT‐2 with two phosphatidylglycerol (PG) head groups and archaeol with a PG, phosphatidylethanolamine, and phosphatidylserine head groups were produced by ANME‐1b archaea. Bathyarchaeota represented 55% of the archaea in the deeper part of the euxinic zone and likely produces archaeol with phospho‐dihexose and hexose‐glucuronic acid head groups.

Trace Metal Enrichment Driven by Phosphate Functional Group Binding Selectivity

AbstractTrace metals have been found to be selectively enriched in the sea surface microlayer (SSML) due to association with organics, but the underlying cause of this selectivity has not been as well studied. Therefore, a systematic cation affinity study on surfactant lipids containing various functional headgroups (‐OH, ‐H2PO4, ‐COOH, ‐N(CH3)2) was conducted at pH 3 to further explain cation enrichment selectivity using Brewster angle microscopy, surface tension salt titration, and infrared‐reflection absorption spectroscopy (IRRAS). At pH 3, the headgroups chosen are neutral, and therefore the variability of surface charge on binding is eliminated. The phosphate ester headgroup was observed to exhibit the strongest trace metal binding, followed by the carboxylic acid headgroup. Hydroxy and dimethylamine headgroups did not exhibit significant trace metal binding. By applying the Langmuir‐Szyszkowski model to the surface tension data, the cation surface binding affinities for phosphatidic acid were determined, with Al3+ &gt; Fe3+ &gt; Zn2+&gt; Mg2+ &gt; Ni2+ &gt; Mn2+∼ Ca2+, an order not predicted from bulk properties such as solid formation constants of metal‐phosphonates. Thus cation binding to surface active organic molecules with phosphate ester headgroups is indicated to be a significant source of trace metal enrichment within the SSML.

Binding of trivalent ions on fatty acid Langmuir monolayer: Fe3+ versus La3.

Langmuir monolayers consisting of fatty acid molecules were prepared on solutions of FeCl3 and LaCl3 to investigate adsorption of trivalent metal ions on carboxylic headgroups by using sum-frequency vibrational spectroscopy. Fe3+ ions bound to the fatty acid headgroups only in the form of hydroxide complexes (Fe(OH)x +3-x), and sum-frequency intensity of water stretch modes increased markedly upon adsorption of ion hydroxide. On the other hand, La3+ ions bound to the charged anionic headgroup as bare trivalent ions. Upon Fe(OH)x +3-x adsorption, the sum-frequency spectrum of carboxyl headgroups showed significant redshift which is opposite to the case of La3+ as well as those for alkali (Na+, K+) and alkali earth metal (Ca2+, Mg2+) ions, which also supports that Fe3+ binding is by covalent metal-ligand bonding, while La3+ binding is by Coulomb attraction.

Discovery of Hydrolysis-Resistant Isoindoline N-Acyl Amino Acid Analogues that Stimulate Mitochondrial Respiration.

N-Acyl amino acids directly bind mitochondria and function as endogenous uncouplers of UCP1-independent respiration. We found that administration of N-acyl amino acids to mice improves glucose homeostasis and increases energy expenditure, indicating that this pathway might be useful for treating obesity and associated disorders. We report the full account of the synthesis and mitochondrial uncoupling bioactivity of lipidated N-acyl amino acids and their unnatural analogues. Unsaturated fatty acid chains of medium length and neutral amino acid head groups are required for optimal uncoupling activity on mammalian cells. A class of unnatural N-acyl amino acid analogues, characterized by isoindoline-1-carboxylate head groups (37), were resistant to enzymatic degradation by PM20D1 and maintained uncoupling bioactivity in cells and in mice.

Hybrid Biomimetic Interfaces Integrating Supported Lipid Bilayers with Decellularized Extracellular Matrix Components.

This paper describes the functionalization of solid supported phospholipid bilayer with decellularized extracellular matrix (dECM) components, toward the development of biomimetic platforms that more closely mimic the cell surface environment. The dECM was obtained through a combination of chemical and enzymatic treatments of mouse adipose tissue that contains collagen, fibronectin, and glycosaminoglycans (GAGs). Using amine coupling chemistry, the dECM components were attached covalently to the surface of a supported lipid bilayer containing phospholipids with reactive carboxylic acid headgroups. The bilayer formation and the kinetics of subsequent dECM conjugation were monitored by quartz crystal microbalance with dissipation (QCM-D). Fluorescence recovery after photobleaching (FRAP) confirmed the fluidity of the membrane after functionalization with dECM. The resulting hybrid biomimetic interface supports the attachment and survival of the human hepatocyte Huh 7.5 and maintains the representative hepatocellular function. Importantly, the platform is suitable for monitoring the lateral organization and clustering of cell-binding ligands and growth factor receptors in the presence of the rich biochemical profile of tissue-derived ECM components.