RS Translocation Research Articles

Directional transduction of male sterile gene rfv 1 of NIAN type in wheat

A new method for producing a NIAN type wheat maintenance line with the male sterile gene rfv 1 was described. That is the variety Xinong Fp1, a 1BL/1RS translocation line, as the acceptor and Triticum macha var. subletschchumicum, a non-1BL/1RS translocation line, as the donor, a directional substitution backcross was made and confirmed by chromosome of root tip preparations and SDS-PAGE analysis. The male sterile gene rfv 1 of Triticum macha var. subletschchumicum was transferred to the genome of Xinong Fp1. A new NIAN type wheat maintenance line with the male sterile gene rfv 1 was bred. The method described was successful in breeding a new male sterile type for hybrid wheat production.

Production of a new wheat cultivar with a different 1B.1R translocation with resistance to powdery mildew and stripe rust

Wheat-rye 1BL.1RS translocations have been widely used in wheat breeding programs. A 1BL.1RS translocation wheat line, 91S-23, was developed from a 1R monosomic addition of the rye (Secale cereale) inbred line L155 into wheat (Triticum aestivum) MY11. A new commercial wheat cultivar, CN18, which also contained the 1BL.1RS translocation, was derived from the cross MY11 × 91S-23. Polymerase chain reaction (PCR) and fluorescence in situ hybridization (FISH) indicated that the rye centromere was eliminated from the 1BL.1RS chromosomes of CN18 but not from 91S-23. Based on the 1RS source and the centromeric structure of the translocation chromosome, CN18 qualifies as a new wheat cultivar possessing a 1BL.1RS translocation. CN18 displayed high yield performance and resistance to powdery mildew and stripe rust, whereas 91S-23 was susceptible to these diseases. The present study provides a new 1RS resource for wheat improvement.

Alteration of drought tolerance of winter wheat caused by translocation of rye chromosome segment 1RS

In Hungary 53% of wheat ( Triticum aestivum L.) cultivars registered during the last twenty years carry the 1RS translocation, the short arm of rye ( Secale cereale L.) chromosome 1. Wheat production in Hungary is limited primarily by drought. Despite the widespread use of this translocation there is no information about its effect on stress tolerance. The objective of this study was to investigate the effect of 1BL. 1RS on drought tolerance. ‘Mv5791-1B.1R’ and the sister line ‘Mv5791-1B.1B’ were examined among other cultivars in greenhouse under well-watered and drought conditions. Data were obtained for anthesis-and maturity date, plant height, root/shoot ratio, components of grain yield, Harvest Index (HI) and Water Use Efficiency (WUE). The translocation line had higher root-and shoot dry weight in both treatments and an increased root/shoot ratio, which was more than the sister line in dry treatment (69 and 38%, respectively). The larger root biomass of the 1RS translocation line could contribute to ...

Identification of new T1BL.1RS translocation lines derived from wheat (Triticum aestivum L. cultivar “Xiaoyan No. 6”) and rye hybridization

Two new T1BL.1RS translocation lines, 48112 and 89121, derived from cross between common wheat (Triticum aestivum L.) cultivar “Xiaoyan No. 6” and rye (Secale cereale L.) cultivar “German White”, were developed and identified by using of molecular markers and cytogenetical methods, GISH and FISH. PCR results of primers NOR-R1 specific for rye and Glu-B3 for 1BS detected the presence of 1RS chromatin and absence of 1BS, and primer for gene 1Bx14 in 1BL indicated the existence of chromosome arm 1BL in the two lines. GISH and FISH methods confirmed the replacement of chromosome arm 1BS with 1RS. Further stripe rust resistant test and quality analysis demonstrated that the new 1BL.1RS translocation lines were higher resistant to mixed races of P. striiformis Westend and observed considerable better quality than other popularized T1BL.1RS cultivars in China. The two lines have been used in wheat breeding for high-yield potential and rust resistance.

A novel resource for genomics of Triticeae: BAC library specific for the short arm of rye (Secale cereale L.) chromosome 1R (1RS).

BackgroundGenomics of rye (Secale cereale L.) is impeded by its large nuclear genome (1C~7,900 Mbp) with prevalence of DNA repeats (> 90%). An attractive possibility is to dissect the genome to small parts after flow sorting particular chromosomes and chromosome arms. To test this approach, we have chosen 1RS chromosome arm, which represents only 5.6% of the total rye genome. The 1RS arm is an attractive target as it carries many important genes and because it became part of the wheat gene pool as the 1BL.1RS translocation.ResultsWe demonstrate that it is possible to sort 1RS arm from wheat-rye ditelosomic addition line. Using this approach, we isolated over 10 million of 1RS arms using flow sorting and used their DNA to construct a 1RS-specific BAC library, which comprises 103,680 clones with average insert size of 73 kb. The library comprises two sublibraries constructed using HindIII and EcoRI and provides a deep coverage of about 14-fold of the 1RS arm (442 Mbp). We present preliminary results obtained during positional cloning of the stem rust resistance gene SrR, which confirm a potential of the library to speed up isolation of agronomically important genes by map-based cloning.ConclusionWe present a strategy that enables sorting short arms of several chromosomes of rye. Using flow-sorted chromosomes, we have constructed a deep coverage BAC library specific for the short arm of chromosome 1R (1RS). This is the first subgenomic BAC library available for rye and we demonstrate its potential for positional gene cloning. We expect that the library will facilitate development of a physical contig map of 1RS and comparative genomics of the homoeologous chromosome group 1 of wheat, barley and rye.

Effect of the 1BL.1RS translocation and of the Glu-B3 variation on fifteen quality tests in a doubled haploid population of wheat ( Triticum aestivum L.)

To investigate the impact of 1BL.1RS translocation on protein content, starch quality, dough rheology, RMT volumes and other quality traits, a doubled haploid population was created and sown in a two-year field experiment. Translocated genotypes accumulated more proteins in the endosperm than non-translocated genotypes. Decrease in the gelatinization of starch was associated with the 1BL.1RS translocation. As for rheological parameters, adapted to bread types not requiring high mixing energy, the 1BL.1RS translocation significantly reduced the elasticity, tenacity and strength of the dough compared to allele c of Glu-B3. Tolerance to over-mixing was also significantly lower in translocated DH lines. In contrast to previously published work, the presence of allele Glu-D3 c resulted in significantly higher tenacity, and thus strength, compared with the allele Glu-D3 b in the present DH population. The final baking test performed on the DH lines of the population, combining favourable alleles for dough rheology and high protein content, demonstrated that in some cases lower tenacity induced by the 1BL.1RS translocation or by Glu-B3 b increases the volume of the loaves.

Polymorphism analysis using 1RS-specific molecular markers in rye cultivars (Secale cerealeL.) of various origin

Six different 1RS-specific molecular markers (RMS13, Bmac213, GPI, 5S, SCM9, IAG95) were tested in twenty rye cultivars of various origin. The aim of the experiments was to choose rye cultivars which give polymorphic PCR products with these 1RS-specific markers compared to the wheat cultivar Mv Magdalena, which contains the 1BL.1RS translocation. The polymorphic rye cultivars can be presumed to differ from the 1BL.1RS translocation originating from the Petkus rye cultivar and will hopefully carry effective resistance genes which can be incorporated into the 1BL.1RS translocation in wheat. Twenty rye cultivars (at least two plants per cultivar) were analysed with these markers. Of fifty-two rye samples analysed, three plants were found to be polymorphic, one (Kisvardai Alacsony from Hungary), for the 5S marker, one (Kriszta from Hungary) for the RMS13 marker and one (Porto from Portugal) for the SCM9 marker. The polymorphic plants were grown to maturity in the phytotron.

A first survey of the rye (Secale cereale) genome composition through BAC end sequencing of the short arm of chromosome 1R

BackgroundRye (Secale cereale L.) belongs to tribe Triticeae and is an important temperate cereal. It is one of the parents of man-made species Triticale and has been used as a source of agronomically important genes for wheat improvement. The short arm of rye chromosome 1 (1RS), in particular is rich in useful genes, and as it may increase yield, protein content and resistance to biotic and abiotic stress, it has been introgressed into wheat as the 1BL.1RS translocation. A better knowledge of the rye genome could facilitate rye improvement and increase the efficiency of utilizing rye genes in wheat breeding.ResultsHere, we report on BAC end sequencing of 1,536 clones from two 1RS-specific BAC libraries. We obtained 2,778 (90.4%) useful sequences with a cumulative length of 2,032,538 bp and an average read length of 732 bp. These sequences represent 0.5% of 1RS arm. The GC content of the sequenced fraction of 1RS is 45.9%, and at least 84% of the 1RS arm consists of repetitive DNA. We identified transposable element junctions in BESs and developed insertion site based polymorphism markers (ISBP). Out of the 64 primer pairs tested, 17 (26.6%) were specific for 1RS. We also identified BESs carrying microsatellites suitable for development of 1RS-specific SSR markers.ConclusionThis work demonstrates the utility of chromosome arm-specific BAC libraries for targeted analysis of large Triticeae genomes and provides new sequence data from the rye genome and molecular markers for the short arm of rye chromosome 1.

Effect of the 1BL.1RS translocation on the wheat endosperm, as revealed by proteomic analysis

The introduction of the 1RS chromosome of rye into wheat made wheat more resistant to several pathogens. Today, this resistance has been overcome but the 1BL.1RS translocation remains interesting because of the improved yield and despite the lower rheological properties it produces. Nothing has been reported yet on the impact of rye chromatin introgression on the grain proteome of wheat. The comparison of the 2-DE profiles of 16 doubled haploid lines, with or without the 1BL.1RS translocation, revealed quantitative and qualitative proteic variations in prolamins and other endosperm proteins. Eight spots were found specifically in lines having the 1BL.1RS translocation; 16 other spots disappeared from the same lines. Twelve spots, present in both genotypes, met the criteria for up- or down-regulated spots. In translocated genotypes, a highly overexpressed spot, identified as a gamma-gliadin with nine cysteine residues, suggests that the lack of LMW-GS induced by 1BL.1RS is counterbalanced by an overexpression of a relatively similar prolamin. Moreover, a spot that was absent from 1BL.1RS genotypes was identified as a dimeric alpha-amylase inhibitor. It was considered to be a valuable candidate to explain the sticky dough associated with translocated cultivars.

Allelic variation of HMW Glutenin subunits and1BL.1RStranslocation in Slovak common wheats

High molecular weight glutenin and 1BL.1RS translocation employing the standard sodium dodecyl sulphate (SDS-PAGE) and acid (A-PAGE) polyacrylamide gel electrophoresis methods were classified in 43 Slovak wheat cultivars registered between 1976 and 2006. Total number of 9 alleles was detected at all Glu-1 loci. The most frequent HMW-GS alleles were “Null” for Glu-1A , 7+9 for Glu-1B and 5+10 for Glu-1D , respectively. At the same time these alleles also constituted the most frequent HMW-GS genotype and phenotype-0, 7+9, 5+10. Such HMW-GS combination was found in 48.8% of all genotypes analyzed in Triticum aestivum L. ssp. aestivum . Eleven different HMW-GS genotype-phenotype combinations were found, occurring at various frequencies.

Domestication and Crop Physiology: Roots of Green-Revolution Wheat

Background and AimsMost plant scientists, in contrast to animal scientists, study only half the organism, namely above-ground stems, leaves, flowers and fruits, and neglect below-ground roots. Yet all acknowledge roots are important for anchorage, water and nutrient uptake, and presumably components of yield. This paper investigates the relationship between domestication, and the root systems of landraces, and the parents of early, mid- and late green-revolution bread wheat cultivars. It compares the root system of bread wheat and ‘Veery’-type wheat containing the 1RS translocation from rye.MethodsWheat germplasm was grown in large pots in sand culture in replicated experiments. This allowed roots to be washed free to study root characters.Key ResultsThe three bread wheat parents of early green-revolution wheats have root biomass less than two-thirds the mean of some landrace wheats. Crossing early green-revolution wheat to an F2 of ‘Norin 10’ and ‘Brevor’, further reduced root biomass in mid-generation semi-dwarf and dwarf wheats. Later-generation semi-dwarf wheats show genetic variation for root biomass, but some exhibit further reduction in root size. This is so for some California and UK wheats. The wheat–rye translocation in ‘Kavkaz’ for the short arm of chromosome 1 (1RS) increased root biomass and branching in cultivars that contained it.ConclusionsRoot size of modern cultivars is small compared with that of landraces. Their root system may be too small for optimum uptake of water and nutrients and maximum grain yield. Optimum root size for grain yield has not been investigated in wheat or most crop plants. Use of 1RS and similar alien translocations may increase root biomass and grain yield significantly in irrigated and rain-fed conditions. Root characters may be integrated into components of yield analysis in wheat. Plant breeders may need to select directly for root characters.

Proteomic analysis of wheat recombinant inbred lines: Variations in prolamin and dough rheology

To investigate the impact of the 1BL.1RS translocation on dough strength and to understand how 1BL.1RS genotypes may overcome the loss of Glu-B3 and Gli-B1, proteomic profiles of 16 doubled haploid (DH) lines of similar glutenin composition but of different strength, as measured by Chopin's alveograph, were compared. The results showed that 32 spots, mainly prolamins, were differentially expressed and that five others were specific to high-strength DH lines. The identification and quantification of the prolamin fractions on the two-dimensional (2D) electrophoresis gels demonstrated that the high-molecular weight glutenin sub-unit (HMW-GS) were up-regulated by 25% in 1BL.1RS DH lines, even though the corresponding genes were not located on the missing 1BS chromosome. The γ-gliadins were also up-regulated (by 36%) in such lines to counterbalance, to some extent, the loss of LMW-GS of Glu-B3. The polymeric prolamin fractions also accumulated in high-tenacity lines and decreased in high-extensibility lines confirming the role of the inter-chain disulfide bonds in resistance to deformation. In contrast, the monomeric fraction of α-gliadin favored extensibility and decreased tenacity by increasing the accumulation (+12%) of α-gliadins in high-extensibility lines; the Gli-A1 allele of the parent Toronit was found to be more abundant when compared to the Gli-A1 allele of parent 211.12014.

Small‐Scale Bread‐Quality‐Test Performance Heritability in Bread Wheat: Influence of High Molecular Weight Glutenin Subunits and the 1BL.1RS Translocation

Small‐scale bread‐quality assays (grain protein content, SDS‐sedimentation volume [SDSS], and single‐kernel characterization system [SKCS] grain hardness) represent important tools in bread wheat (Triticum aestivum L.) breeding. The influence of high‐molecular‐weight glutenin (HMWG) subunits and the 1BL.1RS translocation on small‐scale bread‐quality assays and their heritability was investigated for F3 and F4 lines of two wheat populations. Lines with HMWG subunits 5+10 at Glu‐D1 showed significantly greater SDSS volume and SKCS hardness than those with subunits 2+12 or 4+12. Lines with HMWG subunit 20 at Glu‐B1 had a significantly lower SDSS volume than those with HMWG subunits 7+8 or 7+9. F4 lines bearing the 1BL.1RS translocation had significantly greater protein content. The distribution of SDSS volumes suggested that most bore the undesirable HMWG subunits 2+12, 4+12 or 20, but could be selected against if the SDSS volume <6.0 mL. For SDSS volume, lines with HMWG subunits 5+10 had greater heritability in upward screening, whereas those with HMWG subunits 2+12 or 4+12 had greater heritability in downward screening. The above screening criterion provides an excellent tool for bread quality‐based wheat breeding, irrespective of hard × hard or hard × soft wheat crosses.

Characterization of Wheat-Triticale Lines Resistant to Powdery Mildew, Stem Rust, Stripe Rust, Wheat Curl Mite, and Limitation on Spread of WSMV.

High yield potential and the wide adaptability of wheat-rye T1BL·1RS translocation lines are attractive to breeders. The wheat-rye lines Lankao 1, 3, 4, and 5 were resistant to a wide spectrum of wheat powdery mildew (Blumeria graminis f. sp. tritici) isolates from both China and Canada. They also were resistant to a mixture of wheat stem rust (Puccinia graminis f. sp. tritici) pathotypes (98WSR) and wheat stripe rust (P. striiformis f. sp. tritici) races from western Canada and China. Colonization of wheat curl mite (WCM) (Aceria tosichella) resulted in slower development of rolling and trapping leaves in the Lankao lines than in the WCM-susceptible check cultivars. The delayed development of Wheat streak mosaic (WSM) symptoms on Lankao lines was observed when transmitted by viruliferous WCM, even though they were susceptible to Wheat streak mosaic virus (WSMV). This effect of Lankao lines on limiting the spread of WSM was comparable with other known sources of WCM resistance. Sequential C-banding and genomic in situ hybridization analyses revealed the presence of a pair of T1BL·1RS translocated chromosomes in the Lankao lines. Segregation analysis of the F2 progeny plants derived from crosses between Lankao 4 and the susceptible wheat cvs. Mingxian 169 and Lovrin 13 indicated that a single dominant gene was responsible for the isolate-specific resistance against wheat powdery mildew in Lankao 4. Polymerase chain reaction analysis using an STS marker amplified rye chromatin in powdery mildew-resistant and -susceptible F2 plants of the Mingxian 169 × Lankao 4 cross demonstrated that the resistance of Lankao 4 was not controlled by a gene or genes located on the rye chromosome arm of T1BL·1RS. The resistance of the Lankao lines to diseases and limitation of the spread of WSMV, in combination with good quality and high yield potential, makes them useful for wheat improvement and production.

The situation of common wheat rusts in the Southern Cone of America and perspectives for control

Approximately 9 million ha of wheat (Triticum aestivum and T. durum) is sown in the Southern Cone of America (Argentina, Brazil, Chile, Paraguay, and Uruguay). Two rust epidemiological zones separated by the Andean mountain range have been described in the region. Presently, leaf rust (caused by Puccinia triticina) is the most important rust disease of wheat. The utilisation of susceptible or moderately susceptible cultivars in a high proportion of the wheat area allows the pathogen to oversummer across large areas, resulting in early onset of the epidemics. Severe epidemics cause important economic losses if chemical control is not used. The pathogen population is extremely dynamic, leading to transitory resistance in commercial cultivars. Lr34 is commonly present in the regional germplasm, but there is limited knowledge about the presence of other genes conferring resistance in cultivars. Genes Lr28, Lr36, Lr38, Lr41, and Lr43 provide effective resistance in the region. The best strategy for the stabilisation of the pathogen population and resistance is considered to be the use of adult plant resistance conferred by minor additive genes including Lr34 and Lr46. Sources of this type of resistance from CIMMYT and the region have been made available to breeding programs in the Southern Cone. Stripe rust (P. striiformis f. sp. tritici) is endemic in Chile where chemical control is required to prevent severe losses in stripe rust susceptible cultivars. Although new virulent races emerge frequently, resistance genes Yr5, Yr8, Yr10, Yr15, and YrSp are currently effective in Chile. Some important stripe rust epidemics have occurred in Argentina, Brazil, and Uruguay. Avoiding the use of highly susceptible cultivars appears to be an effective strategy to prevent stripe rust epidemic development in this area. There have been no serious stem rust (P. graminis f. sp. tritici) epidemics for over 2 decades; the disease was controlled by resistant cultivars. The most important genes conferring resistance in Southern Cone germplasm at the present time are probably Sr24 and Sr31. Other effective genes are Sr22, Sr25, Sr26, Sr32, Sr33, Sr35, Sr39, and Sr40. Several stem rust susceptible wheat cultivars have recently been released. The increased cultivation of susceptible cultivars may lead to higher stem rust incidence, increasing the probability of appearance of new virulent races. Since the 1BL.1RS translocation possessing Sr31 is present in a high proportion of the regional germplasm, the possible introduction of stem rust with Sr31 virulence from Africa is of great concern.

Major Genetic Changes in Wheat with Potential to Affect Disease Tolerance

ABSTRACT Selection through plant breeding has resulted in most elite winter wheat germplasm in the United Kingdom containing the Rht-D1b semi-dwarfing allele, the 1BL.1RS chromosome arm translocation with rye, and an allele conferring suppression of awns. Near-isogenic lines (NILs) were used to test whether these major genetic changes have had any effect on disease tolerance. The ability of the NILs to tolerate epidemics of Septoria leaf blotch or stripe rust was measured in four field experiments over two seasons. Tolerance was quantified as yield loss per unit of green canopy area lost to disease. There was a trend for the presence of the 1BL.1RS translocation to decrease tolerance; however, this was not consistent across experiments and there was no effect of semi-dwarfing. The awned NIL exhibited decreased tolerance compared with the unawned NIL. There were significant differences in tolerance between the cultivar backgrounds in which the NILs were developed. Tolerance was lower in the modern genetic background of Weston, released in 1996, than in the genetic background of Maris Hunstman, released in 1972. The data suggest that certain physiological traits were associated with the tolerance differences among the backgrounds in these experiments. Potential yield, accumulation of stem soluble carbohydrate reserves, and grain sink capacity were negatively correlated with tolerance, whereas flag leaf area was positively correlated.

Development and application of a new codominant PCR marker for detecting 1BL·1RS wheat–rye chromosome translocations

AbstractThe 1BL·1RS translocation has been widely used in wheat breeding programmes throughout the world. Unfortunately, this translocation has frequently resulted in unsatisfactory grain processing quality. Two primer combinations derived from the published sequence of a ω‐secalin gene on 1RS gave polymerase chain reaction (PCR) fragments 0.4 and 1.1 kb in size. Both fragments can be used to quickly detect 1BL·1RS translocations. By combining the PCR assay resulting in the 1.1‐kb fragment from 1RS and a PCR assay resulting in a 0.6‐kb fragment from the Glu‐B3 gene on 1BS, plants homozygous for the 1BL 1RS could clearly be distinguished from the heterozygous ones. This codominant marker was successfully applied to genotype a segregating F2 population and a local cultivar collection.

Identification of leaf rust resistance genes in wheat (Triticum aestivum L.) cultivars using molecular markers

A collection of 68 cultivars of common wheat has been screened for leaf rust resistance genes with the use of molecular markers. Markers of genes Lr1, Lr9, Lr10, Lr19, Lr20, Lr21, Lr24, and Lr26 have been used. It has been suggested that allele Xgwm295 be used as a marker for identifying the Lr34 gene. The genes originating from Triticum aestivum L., as well as the Lr26 gene contained in rye translocation 1RS, are the most frequent. Genes originating from wild wheats were rarer in the cultivars studied.

Resistance in U.S. Wheat to Recent Eastern African Isolates of Puccinia graminis f. sp. tritici with Virulence to Resistance Gene Sr31.

The stem rust resistance gene Sr31 derived from rye has been used as an important source of stem rust resistance in many wheat cultivars worldwide. Isolates of Puccinia graminis f. sp. tritici with virulence to Sr31 were identified from Uganda in 1999. Stem rust susceptibility in wheat lines with Sr31 was observed in Kenya in 2003 and 2004. An isolate collected from Uganda in 1999 and an isolate collected from Kenya in 2004, identified to be race TTKS, were used in the rust evaluations. Selected cultivars and advanced breeding lines (450 in total) of wheat from the United States were tested against these two stem rust isolates. Resistance to race TTKS was detected in major classes of wheat with the following frequencies: 16% of hard red spring wheat, 48% of hard red winter wheat, and 27% of soft winter wheat. The genes that conferred resistance in the spring wheat have not been conclusively identified. Resistance in cultivar Ivan was likely due to Sr24. Resistance in hard red winter wheat was postulated to be primarily due to Sr24, and resistance in soft winter wheat was postulated to be primarily due to Sr36. The 1AL.1RS translocation present in many U.S. winter wheat cultivars and breeding lines appears to carry an effective resistance gene different from Sr31. The presence of resistance to race TTKS in the adapted germ plasm presents an opportunity to improve stem rust resistance in wheat.

Distribution of the wheat–rye translocation 1RS.1BL among bread wheat varieties of Bulgaria

AbstractThe distribution of the wheat–rye translocation 1RS.1BL was studied in 31 winter wheat varieties from Bulgaria. The presence of the translocation was verified in 17 varieties using chromosome N‐banding analysis, PAGE‐analysis of grain storage proteins and DNA‐marker analysis. The 1RS.1BL has been transmitted in 54% of varieties with a known source of the translocation in their pedigree.