Grapevines constitute a very important crop in Greece and ochratoxin A (OTA) contamination of grapes is one of the most serious problems. The main aim of this study was to investigate the fungicidal activity of the fungicide Switch 62.5WG (37.5% v/v cyprodinil + 25% v/v fludioxonil) and Rhapynal (80% rhamnolipids) to reduce the black Aspergillus spp. (section Nigri) population and OTA contamination of grapes grown in Greece. Applications with the above products were conducted both at the harvesting stage and after cold storage. The results showed that pre-harvest applications with Switch 62.5WG or Switch 62.5WG + Rhapynal generally reduced the black Aspergillus spp. population, but not the OTA contamination of grapes. However, a repeated application after cold storage further reduced the black Aspergillus spp. population and significantly reduced the OTA contamination of grapes. Generally, this study showed that it is possible to reduce the black Aspergillus spp. population, but not the ochratoxin A contamination of grapes by spray applications with the fungicide Switch 62.5WG. However, fungicide application to grapes immediately after cold storage (2 months) could reduce ochratoxin A contamination of grapes and further reduce the black Aspergillus spp. population.

Begomoviral diseases in cucurbits have been observed in Baja California Sur (BCS), Mexico recurrently since the 2017 detection of the Squash leaf curl virus (SLCuV) in squash. Two years later, samples of symptomatic plants were collected in three arid agricultural regions, where the most frequently observed symptoms were chlorosis, reduced leaf size, stunting and severe leaf deformation, observed mainly on squash and cantaloupe. The mean incidence of begomovirus-like symptoms differed among cucurbits, with 20% in cucumber, 28% in cantaloupe, 30% in watermelon and 50% in squash. Samples were tested by polymerase chain reaction for begomovirus infection with degenerate primers, and later the virus identities were confirmed by specific primer pairs. All symptomatic cucurbit samples tested positive for SLCuV, and in a second analysis of these previously tested samples, squash, and cantaloupe samples tested positive for Cucurbit leaf crumple virus (CuLCrV). Thus, these samples showed a mixed CuLCrV/SLCuV infection. Pairwise identity analysis of the DNA-A component of the viruses indicated the presence of CuLCrV at 99%, and SLCuV at 99.1%. Recombination analyses between these viruses were negative, indicating that they belong to well-defined phylogenetic groups. Additionally, the 5´-TGGTGTCC-3´ iteron was consistently observed in all SLCuV and CuLCrV variants, including in other close species of the SLCuV clade. However, an additional iteron was observed in CuLCrV-BCS that is not in the Arizona and California variants, indicating that more studies are needed to elucidate the role of the additional iteron and the importance of CuLCrV/SLCuVSLCV mixed infection in emerging viruses in Mexico and other parts of the world.

Tea (Camellia sinensis (L.) Kuntze) is a dicotyledonous woody shrub species widely cultivated to produce a beverage made from its leaves. Brown blight is a destructive foliar fungal disease that reduces tea production and degrades quality, resulting in lower market value. Typical brown blight symptoms observed in three commercial tea plantations in Malaysia were characterized as brownish to black lesions on young leaves. The lesions expanded with age, becoming darker and developing into necrotic cells. A total of 45 fungal isolates were isolated from brown blighted tea leaves and identified as Colletotrichum camelliae. Morphological characteristics coupled with universal spacer region and multigene phylogenetic relationships using the internal transcribed spacer (ITS), β-tubulin (tub2) and glyceraldehyde-3-phosphate dehydrogenase (gapdh) were used to accurately identify fungal isolates. The results of the pathogenicity test revealed that C. camelliae was responsible for causing brown blight disease of tea. This study highlights the occurrence of C. camelliae which causes tea brown blight in Malaysia. These findings may assist in disease monitoring, strict quarantine and effective control management of diseased tea plants.

Potato and tomato are grown in all Canadian provinces and contribute billions of dollars in exports and sales. Late blight, caused by Phytophthora infestans, is a destructive disease of potato and tomato worldwide and is responsible for millions of dollars in losses annually. Changes in pathogen strains were reported to be associated with late blight epidemics in several regions and pose challenges to late blight management. In British Columbia (BC), diverse strains of P. infestans were reported. Using multiplex microsatellite or simple sequence repeat (SSR) markers, we identified the new genotype US17 of P. infestans from samples of potato and tomato with late blight in BC. All isolates were of the A1 mating type. One, five, and one isolates were sensitive, moderately resistant, and highly resistant to metalaxyl-m, respectively. This is the first report of the occurrence of the US17 genotype in BC and Canada. The US17 strain was also able to cause tuber rot and foliar blight symptoms in potato in pathogen-inoculated assays.

Litylenchus crenatae mccannii is a foliar nematode that causes severe damage to beech, known as beech leaf disease (BLD). Previous studies have characterized and identified L. crenataein Japan and a subspecies L. crenatae mccannii in the USA. Litylenchus crenatae mccannii has been found to cause BLD in native and non-native beech hosts in North America. As little is known about the distribution and diversity of the nematode in Ontario, Canada, beech foliage was sampled throughout southcentral Ontario. Incidence and severity maps show that BLD spread from its first detections in 2017, in Elgin and Norfolk counties, to the west and northeast. A gradient in severity and incidence was observed with the highest ratings at the locations where it was originally found. The extent of the nematode’s distribution is much broader than BLD, occurring throughout much of the range of American beech. Sequences of two barcoding loci for the L. crenatae mccannii isolates from 11 locations in Ontario showed 100% similarity within and among these locations. The genotype of L. crenatae mccannii found in Ontario is the same as that identified in the USA. This finding is consistent with the fact that 92% of beech imported into Canada is from the USA and suggests that the USA could be the origin of L. crenatae mccannii nematodes in Ontario or that both countries have imported beech trees from the same source country of BLD. This research provides motivation for further studies to clarify the sources of L. crenatae mccannii.

Pointed gourd (Trichosanthes dioica Roxb) is a perennial cucurbitaceous vegetable popular in the eastern and northern parts of India. In July 2018, an occurrence of southern blight disease was observed in a pointed gourd crop grown in Odisha state located in the eastern part of India. The typical symptoms included angular necrotic patches and disintegration of leaf tissues with the vein and veinlet intact, exhibiting a diagnostic netted pattern of veins. Silky white, fan-shaped mycelial growth with sclerotial bodies was observed on the lower surface of infected leaves. Eventually, the infected leaves dried up, leaving several bare patches in the field. Associated fungi were isolated, which resembled the reference strain Athelia rolfsii based on colony characteristics. Phylogenetic analysis of the internal transcribed spacer of rRNA gene region confirmed that the isolates were A. rolfsii. Pathogenicity was successfully proved on detached leaves as well as on potted pointed gourd plants. On the basis of symptoms associated with the disease, fungal morphology, molecular identification, and pathogenicity tests on host plants, the causal fungus was identified as A. rolfsii. This is the first report of southern blight disease caused by A. rolfsii on pointed gourd in India.

In June 2020, branch canker and brown spot of leaves on walnut were observed in Qingyang, China. A total of five strains were isolated from symptomatic samples and verified for pathogenicity based on Koch’s Postulates, which showed that strains Hz4–1, Hz5–2, and Hy3–1 were the causative agents, and preliminarily identified them as members of the genus Nothophoma based on morphological characteristics. Subsequently, multi-locus phylogenetic analysis of the partial sequences of internal transcribed spacer (ITS), nuclear large ribosomal subunit (LSU), partial β-tubulin (TUB2), and RNA polymerase II second largest subunit (RPB2) showed that the three strains were clustered into two groups on the phylogenetic tree: strain Hz4–1 and Hz5–2 and Nothophoma quercina (CBS 6633.92) clustered into one branch with 84% support, while Hy3–1 and Nothophoma spiraeae (CFCC 53 929) clustered within a well-supported clade with a bootstrap value of 99%. As a result, combining morphological characteristics and multi-locus systematic analysis, the strains Hz4–1 and Hz5–2 were identified as N. quercina, and Hy3–1 was identified as N. spiraeae, which is the first report of N. spiraeae causing walnut disease in China.

Challenges exist worldwide for the storage of animal feed, though year-long feeding of livestock is especially difficult in northern climates, including Canada. Usage of silage allows for crops to be harvested at the optimal nutritional value and stored for extended periods in customized storage systems. This case study investigated various feed management practices typical of small beef cattle feedlot farms in Southwestern Ontario, Canada. Crop samples were collected monthly and analyzed for mycotoxins and fungal secondary metabolites by liquid chromatography mass spectrometry (LC-MS/MS). Stored barley contained modest concentrations of deoxynivalenol and related compounds, as well as near trace amounts of fumonisin. Stored hay contained low concentrations of deoxynivalenol and beauvericin from the field. Hot spots of the Penicillium metabolite citrinin were detected after 7–8 months of storage in barley (39.2 ng g−1). Citrinin was also detected after 7–8 months in hay (16.3–17.5 ng g−1) along with the appearance of trace amounts of other storage toxins, including penitrem A (8.84 ng g−1), griseofulvin (34.8 ng g−1) and sterigmatocystin (14.1–261 ng g−1). This case study was a unique opportunity to use ‘citizen science’ to observe the onset of postharvest fungi and associated mycotoxins in various storage conditions allowing for the farmer to make necessary modifications before major problems begin. An improved understanding of the storage conditions that foster fungal growth and mycotoxin production in this working farm led to better agronomic practices, ultimately improving feed quality, livestock health, and profitability.